Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00255 ATGGCGTCTCAGGAAATGAAGAAGGAGAGAGCAGAGGTAGCGGCGAGGCTTGCTGCTTCCGATCTCAGAGACATTAACAGAGACGAAGAGCAGCATGCAGCGGCGCCTGGAACCGAGAAAAAAGCCACGGTGGAGGTCGTGGAGACGGACCGGGGGGCGGCACATGATCAGCAGCAGAGGTCCGGCGTGATCGGATCTGTACTGAAGGCGGTGCAGGACACGTATGAACACGCGAAGGAGGCGGTGGTTGGGAAGAGCCAGGAAGCGGAGGAGAGAGGTCAGGAGGTAAAGGACGCGTCGGCGGAGAAGGCAAGAGAGACGACGGAGGAGGCGAAGAGGAAAATGGACGAATATGGAAGTGCAGCGGCAGAGAAGGCGAGGGAGACGAAGGAAGCCACCGGCGATACGATGGCGTCGGCGAGAGGGAAAATGAGTGAATATGGAGAGAAAACAAGGGACAAGACAGGCGAATATAAGGATTATGCGGCGGATAAGGCGAGGGAGACGAAGGACGCGGCGGCAAGAAAAGCAGGGGAATACAAAGACTATACAGCGGAGAAGACGACGGAGGCTACAGAATCCTCCAAAGGAAAGGCCGGCGAGTATAAGGATTACGCAGCGGAGAAGGCGAGGGAAGCAAAGGATGCAGCGGCGAGAAAAGCAGGGGAATACAAAGATTACACAGCGGAGAAGGCGAAGGAAACGAAGGACACTGCAGCGAGAAAAGCAGGGGAATACAAAGATTACACAGCGGAGAAGACTAGGGAAGCGACAGAATCGGCGAAGGGGAAGGCTGGTGAGTACAAAGATTACGCGGCGGAGAAGGCGAATGAAGCGAAGGAGAAGGCAGCAGAGTACAAGGATTACACGGAGGAGAAGGCGAAGGAGACGAAGGATGCGGCGGCAAGGAAGGCAGGGGAATACAGAGACTATACAGCGGAGAAAGCGAGAGAGACATCGGAGTACACGGCTGAGAAGGCGAAAGAAGGGAAGGATACGACAGTAAGCAAACTCGGGGAATTGAGAGATTCAGCGGCGGATGCTGCAAAGAGAGCCATGGAATACTTATCTGGAAAGAAAGAGGAAGCGAAGGAGAAATCTTTCGAGACTAAAGAAGCCACCAAGGAATGGCAGGAAAAGATGTGCGAATCGGAGGATGCCGCGAGGAGGAAGATGGAGGAGCTGAGGCTGCAGGGAGGAGGGAGCGACAGAGAAGAAGCAAAAGTGACTCTAGAGCGTAATAGAGGCAGTGGCGGGAAGGGAGACACGGTGGTGGTAGGGATGGAGGAGACAAGGCCGGGGTCGCTGGCCTCGACTTTGAAGCAGGCGGACGATATGGCGGGGCAGACTTTCAACGACGTTGGTCGAATGGACGAGGACCGTTCGAAGGATCGTCAGGGAAAAATGTGA 1410 55.25 MASQEMKKERAEVAARLAASDLRDINRDEEQHAAAPGTEKKATVEVVETDRGAAHDQQQRSGVIGSVLKAVQDTYEHAKEAVVGKSQEAEERGQEVKDASAEKARETTEEAKRKMDEYGSAAAEKARETKEATGDTMASARGKMSEYGEKTRDKTGEYKDYAADKARETKDAAARKAGEYKDYTAEKTTEATESSKGKAGEYKDYAAEKAREAKDAAARKAGEYKDYTAEKAKETKDTAARKAGEYKDYTAEKTREATESAKGKAGEYKDYAAEKANEAKEKAAEYKDYTEEKAKETKDAAARKAGEYRDYTAEKARETSEYTAEKAKEGKDTTVSKLGELRDSAADAAKRAMEYLSGKKEEAKEKSFETKEATKEWQEKMCESEDAARRKMEELRLQGGGSDREEAKVTLERNRGSGGKGDTVVVGMEETRPGSLASTLKQADDMAGQTFNDVGRMDEDRSKDRQGKM 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1115349 1116973 + CmaCh14G002550.1 Cma14g00255 307238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00255 469 PANTHER DAUER UP-REGULATED-RELATED 281 462 - -
Cma14g00255 469 PANTHER DAUER UP-REGULATED-RELATED 1 264 - -
Cma14g00255 469 Gene3D - 223 288 - -
Cma14g00255 469 Gene3D - 307 375 - -
Cma14g00255 469 Gene3D - 138 198 - -
Cma14g00255 469 Pfam Late embryogenesis abundant protein 287 319 IPR004238 -
Cma14g00255 469 Pfam Late embryogenesis abundant protein 225 257 IPR004238 -
Cma14g00255 469 Pfam Late embryogenesis abundant protein 143 180 IPR004238 -
Cma14g00255 469 Pfam Late embryogenesis abundant protein 181 224 IPR004238 -
Cma14g00255 469 Pfam Late embryogenesis abundant protein 247 285 IPR004238 -
Cma14g00255 469 Pfam Late embryogenesis abundant protein 203 246 IPR004238 -
Cma14g00255 469 Pfam Late embryogenesis abundant protein 321 352 IPR004238 -
Cma14g00255 469 MobiDBLite consensus disorder prediction 1 43 - -
Cma14g00255 469 MobiDBLite consensus disorder prediction 359 469 - -
Cma14g00255 469 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 281 462 - -
Cma14g00255 469 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 1 264 - -
Cma14g00255 469 Coils Coil 346 366 - -
Cma14g00255 469 MobiDBLite consensus disorder prediction 359 415 - -
Cma14g00255 469 MobiDBLite consensus disorder prediction 283 339 - -
Cma14g00255 469 MobiDBLite consensus disorder prediction 454 469 - -
Cma14g00255 469 MobiDBLite consensus disorder prediction 1 36 - -
Cma14g00255 469 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 261 319 - -
Cma14g00255 469 MobiDBLite consensus disorder prediction 81 134 - -
Cma14g00255 469 Coils Coil 272 299 - -
Cma14g00255 469 Coils Coil 101 121 - -
Cma14g00255 469 MobiDBLite consensus disorder prediction 81 151 - -
Cma14g00255 469 PANTHER DAUER UP-REGULATED-RELATED 261 319 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00255 - - cmo:103486554 539.265