Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00257 ATGGGAGCCTTGCTCTCTTACTTGGCTGAAGTTGCCAATGGCTCCACCAACGATCCTGGCCTCGGAGACATACCCGAGAGTTGCGTCGCCTGTGTTTTTCTTTACCTGACTCCGCCACAGATTTGCAACCTTGCGCGGCTTAACAGAGCGTTTCGCGGCGCCGCCTCGTCGGATTCCGTTTGGCAATCAAAATTGCCTTCAAATTATCAAGATCTTCTCGATTTGCTGCCCCCCCAACGGTATCAAAATCTGTCAAGAAAGGACATATACGCACTGCTATCTCGGCCGGTGCCATTCGATGATGGAAATAAGGTGGAGGTGTGGCTGGACAGAATCACGGGAAAGATTTGCATGTCAATATCAGCGAAGGCCATGTCTATAACTGGAATTGATGATAGAAGATACTGGAATTGGATTTCGACTGAAGAGTCTCGCCAATTCGTTCAAGTAATGAAAAGTTTTATTCATGATTTACTTGCAAAAGAGGTGGTTTGCATTTTGATGGAAGATGTATCTATGCCTCTATGGACGGGAGGTGCTGCTATGACTATCAAGTCTTTTCTGAGGATTTTGCATCTTGAACTCTATATGTTCAATGTTGTGGCATATCTGCAGCAAATTTGGTGGTTTGAAGTAGATGGGATGGTGAAATTCCCTTTTCCTGCTGATATCTATACACTGACCTTCAGGCTTCACCTTGGAAGGTTCTACAAGCGGCTCGGCCGACGTGGATGCAGCTTCGAGCATACTCACGGTTGGGATGTAAAGCCTGTACGGTTCGAAATGTCTACTTCTGATGGACAGCAAGCGACACATGAATTCTGTTTAGACGAGAACAGATTTATTGAAAGTGAACACCACAAGCGTGGGTGTTGGATAGAATACAAGGTAGGTGAATTCTTTGTCAATGAGTCGGGATCGACCACGGAAATTAGATTTTCCATGAAACAGATTGACTGCACGCATTCTAAAGGTGGGGTTTGTGTAGATTCTGTATTTATCGTTCCCAGTAACTTGAAAGAGCGTAAAACACGAGGAATTCCAAAAGGCTTTTGGCATTTCGTTTGTCGTCTTGGTTTTCCTCGATGGGATATCTGGTTTATTGCTATGCCCCCAATGAATAAGATTTATAAACAAGTTTTCAAGGTTGAAAATGCACACTTTTCTTGTGGCTTTTGTTTGTCCTCATCCTTTAGTACATGTCTTAGATCTACTTTCCAATGCCTAATTCATCAGTTTTGTCATCTCCGGTCACCGGGGAATATGGAATGGGCCACCGGAAGTTTCAGACCCTTTCTTTCTCGGCCACCGGAATCTTCCTTTGGGTTTCTCTATAACTATAATCTTGAACAATATCAGGGCATCGATGTGAAGCATTCGGCCATGGCGGGGACGTCTGAGACCGTGCTCCAAGGGCTTGTTCCAGGGATGGATATGAACAGCTATGGAAATTTGGATAAGAAGAAGCGGCTGAGCAGTGAGCAGCTCGAGTCACTCGAACGTAGCTTCCAGGAGGAGATCAAGCTCGATCCCAATCGGAAGCAGAAGCTTTCGAAGGAGCTCGGTCTGCAGCCGCGCCAGATCGCCGTTTGGTTTCAGAACCGCCGTGCGAGGTGGAAGGCGAAGCAGCTCGAGCATCTCTACGATACTCTCAAACAAGAGTTCGATGCCATTTCTAGAGAGAAACACAAGCTTCAAGAGGAGGTAATAAAGCTGAGGAGTATGCTGAGAGAGCTTCAAGCTGCAAGGAACCAAGTATCGACGGTGTACACTGATTTGTCGGGCGAGGAGACGGTGGAAAGCACCTCCGTCGGAGCTGGCTGCTCGAGCAAGCCGAGAGCGGTGGCAACGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAAACCAGTACCCGACGCCACCGGAGCAGTGCAACTATGTGTTCAACACAGAGGAATACAACCCCATGTCTCCAACTTTCTGGGGCTCTCTGCCACCCACATATCATCCCCACCTTTCAAGAAAAAGTAAGATTGTGAAGTGA 2022 47.33 MGALLSYLAEVANGSTNDPGLGDIPESCVACVFLYLTPPQICNLARLNRAFRGAASSDSVWQSKLPSNYQDLLDLLPPQRYQNLSRKDIYALLSRPVPFDDGNKVEVWLDRITGKICMSISAKAMSITGIDDRRYWNWISTEESRQFVQVMKSFIHDLLAKEVVCILMEDVSMPLWTGGAAMTIKSFLRILHLELYMFNVVAYLQQIWWFEVDGMVKFPFPADIYTLTFRLHLGRFYKRLGRRGCSFEHTHGWDVKPVRFEMSTSDGQQATHEFCLDENRFIESEHHKRGCWIEYKVGEFFVNESGSTTEIRFSMKQIDCTHSKGGVCVDSVFIVPSNLKERKTRGIPKGFWHFVCRLGFPRWDIWFIAMPPMNKIYKQVFKVENAHFSCGFCLSSSFSTCLRSTFQCLIHQFCHLRSPGNMEWATGSFRPFLSRPPESSFGFLYNYNLEQYQGIDVKHSAMAGTSETVLQGLVPGMDMNSYGNLDKKKRLSSEQLESLERSFQEEIKLDPNRKQKLSKELGLQPRQIAVWFQNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVIKLRSMLRELQAARNQVSTVYTDLSGEETVESTSVGAGCSSKPRAVATAAAAAAAAAANQYPTPPEQCNYVFNTEEYNPMSPTFWGSLPPTYHPHLSRKSKIVK 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1120366 1128702 - CmaCh14G002570.1 Cma14g00257 307240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00257 673 Coils Coil 534 585 - -
Cma14g00257 673 PANTHER F-BOX PROTEIN PP2-A15 187 345 - -
Cma14g00257 673 ProSiteProfiles 'Homeobox' domain profile. 482 542 IPR001356 GO:0003677
Cma14g00257 673 PANTHER F-BOX PROTEIN PP2-A15 1 149 - -
Cma14g00257 673 Gene3D - 481 546 - -
Cma14g00257 673 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 187 345 - -
Cma14g00257 673 SMART HOX_1 486 546 IPR001356 GO:0003677
Cma14g00257 673 ProSiteProfiles F-box domain profile. 18 64 IPR001810 GO:0005515
Cma14g00257 673 Pfam Homeodomain 487 540 IPR001356 GO:0003677
Cma14g00257 673 Pfam Homeobox associated leucine zipper 542 576 IPR003106 GO:0006355|GO:0043565
Cma14g00257 673 SUPERFAMILY F-box domain 8 82 IPR036047 GO:0005515
Cma14g00257 673 ProSitePatterns 'Homeobox' domain signature. 517 540 IPR017970 GO:0000981|GO:0006355
Cma14g00257 673 Pfam Phloem protein 2 115 150 IPR025886 -
Cma14g00257 673 Pfam Phloem protein 2 197 336 IPR025886 -
Cma14g00257 673 CDD homeodomain 487 543 IPR001356 GO:0003677
Cma14g00257 673 SUPERFAMILY Homeodomain-like 477 544 IPR009057 -
Cma14g00257 673 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 149 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00432 Cma14g00257 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g01182 Cma-Chr3:7898781 Cma14g00257 Cma-Chr14:1120366 2.09E-48 dispersed
Cma14g00257 Cma-Chr14:1120366 Cma16g01005 Cma-Chr16:7742864 1.86E-73 dispersed
Cma06g00432 Cma-Chr6:2000335 Cma14g00257 Cma-Chr14:1120366 1.98E-94 transposed
Cma14g00257 Cma-Chr14:1120366 Cma03g01181 Cma-Chr3:7887425 6.94E-45 wgd
Cma14g00257 Cma-Chr14:1120366 Cma06g00431 Cma-Chr6:1992141 1.58E-153 wgd
Cma14g00257 Cma-Chr14:1120366 Cma07g00874 Cma-Chr7:4111648 3.49E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36179 PF14299 PP2 2.30E-25 No_clan Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00257 - - cmax:111481703 593.578