Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00263 ATGCCGGTGAACATTTGCAGTTTCGCCGTCGCCCTCTTTCTCTCTCTTACCCTTTTGGCCTCTGCTTCTCTCTCTTTGGACGACGGCGACGACACCTCTGCTCTTACTCGCTTCCGTCTTCAAGCTGATTCTCACGGCGGCCTTCTAAGAAATTGGACTGGTTCTGATGCCTGTGCTTCTTCATGGCGTGGAGTTCAATGCTCTGTTAATGGCCGTGTTGTTGCTCTTTTTCTTCCTTCTATGAACTTACGAGGCCCCATTGAGTCTCTTGCGCCGCTCCACCAACTCCGCCTTCTCGACCTCCACGACAACCGTTTGAATGGTACCATTTCGCCGCTTGTGAACTGCACGAATCTCAAGCTGTTGTATCTCTCTGGCAACGACTTCTCCGGCGAGATTCCGCCGGAGATCTCTTCTCTACGGCGACTCCTAAGGCTAGATTTGTCAGATAACAACATCCGCGGCGGAATCCCAGAGGATCTCGCTAAATTGTCTCGGCTTCTTACACTCCGTTTGCAGAACAATGTTCTCTCCGGTACGGTGCCCGATTTCTCTGTTTCGCTTGTGAATCTCACCGAACTTAATTTAACCAACAATGAACTGTCCGACCGGTTGCCGGACGGGATGATGAAGAAATTCGGCGAGAAGAGTTTCACTGGAAACGAAGGGATTTGTGGATCGAGTCCGTTACCGATCTGTTCGGTTACTGGTTCACCGCCGGCGATGGATTCTAGCAGAACGGTACCTTCAAATCCAAGCTCATTGCCGCAAAACCCTATCATCAGTTCATATAATAAAGAATCGCGAAAAGGACTTAGCCCTGGCGCGATTGTCGCGATTGTGATCGCAAATTGCGTAGCGTTGCTTGTAATTATCTCGTTTATTGTCGCGTATTACTGCACTCGTGATCGTGACCGGAGTTCAAGCTCCATGGCCGGAAGCGAGAGCGGTAAGAGAAGGAAGAGCGGAAGTAGCTACGGCAGCGAGAAGAAGGTGTACGCCAACGGCGGCGGCGACAGTGATGGCACTAACGCTACAGACAGAAGCAAATTGGTGTTCTTCGATTGGAAGAAGCAATTCGAGCTTGAAGATTTGTTGAGAGCGTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACTGTTTACAGGGCGGTGCTGGACGACGGTTGTACGGTGGCGGTGAAGAGATTGAAGGATGCAAACCCATGTCCGAGGAAGGATTTTGAGCAGTATATGGATGTAATTGGGAAGCTTAAACATCCAAATATTGTTAGATTGAGAGCTTTTTACTACGCTAAAGAAGAAAAGCTTCTGGTTTATGAATATCTTCCAAATGGGAGTCTTCATAATCTTCTCCATGGGAATCGAGGGCCAGGGAGGATTCCATTGGATTGGACGACCAGGATCAGTTTAGTTCTTGGAGCTGCTCGTGGGCTAGCAAGCATCCATGGAGAATACAAAGCATCAAACATTCCCCATGGCAATGTCAAATCTTCCAATGTTCTTCTCGACAAAAATGGAGTTGCTTGCATTTCTGATTTCGGGTTGTCTCTTCTTCTCAATCCCGTTCATGCCATTGCACGGTTGGGAGGATACAAGGCTCCTGAACAAGACGAGACGAAACGACTCTCTCAAAAAGCAGATGTTTATAGCTTTGGAGTTTTGTTGTTAGAAGTATTGACGGGTCGTGCACCGTCGCTCTACCCGTCGCCTTCGCACCCACGTAACGACAAGCAAGAGTTGTCGGTGGACCTCCCGAAATGGGTTCGATCCGTGGTGAAGGAAGAGTGGACGGCTGAGGTGTTTGATCCGGAGCTATTGAGGTATAAGAACATTGAGGAGGAGCTTGTGTCTATGCTTCATGTTGGGTTGGCTTGTGTTCTTCCTCAGCCTGAGAAGAGACCAACAATGGCGGAAGTGACAAAGATGATCGAAGATATTAGGGTCGAGCAGTCCCCGCTCGGAGAAGATTACGACGAATCGCGTAATTCGCTTTCACCTTCCATTGCCACCACAGAAGATGGTATGGCGTAG 2034 49.26 MPVNICSFAVALFLSLTLLASASLSLDDGDDTSALTRFRLQADSHGGLLRNWTGSDACASSWRGVQCSVNGRVVALFLPSMNLRGPIESLAPLHQLRLLDLHDNRLNGTISPLVNCTNLKLLYLSGNDFSGEIPPEISSLRRLLRLDLSDNNIRGGIPEDLAKLSRLLTLRLQNNVLSGTVPDFSVSLVNLTELNLTNNELSDRLPDGMMKKFGEKSFTGNEGICGSSPLPICSVTGSPPAMDSSRTVPSNPSSLPQNPIISSYNKESRKGLSPGAIVAIVIANCVALLVIISFIVAYYCTRDRDRSSSSMAGSESGKRRKSGSSYGSEKKVYANGGGDSDGTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMDVIGKLKHPNIVRLRAFYYAKEEKLLVYEYLPNGSLHNLLHGNRGPGRIPLDWTTRISLVLGAARGLASIHGEYKASNIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQDETKRLSQKADVYSFGVLLLEVLTGRAPSLYPSPSHPRNDKQELSVDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMAEVTKMIEDIRVEQSPLGEDYDESRNSLSPSIATTEDGMA 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1137576 1140244 - CmaCh14G002630.1 Cma14g00263 307246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00263 677 MobiDBLite consensus disorder prediction 651 677 - -
Cma14g00263 677 PANTHER LRR RECEPTOR-LIKE KINASE 5 668 - -
Cma14g00263 677 MobiDBLite consensus disorder prediction 306 341 - -
Cma14g00263 677 Gene3D Ribonuclease Inhibitor 25 109 IPR032675 -
Cma14g00263 677 MobiDBLite consensus disorder prediction 306 321 - -
Cma14g00263 677 ProSiteProfiles Protein kinase domain profile. 367 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00263 677 Pfam Protein kinase domain 371 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00263 677 Gene3D Transferase(Phosphotransferase) domain 1 443 666 - -
Cma14g00263 677 SUPERFAMILY L domain-like 30 209 - -
Cma14g00263 677 MobiDBLite consensus disorder prediction 237 262 - -
Cma14g00263 677 CDD STKc_IRAK 373 647 - -
Cma14g00263 677 Gene3D Phosphorylase Kinase; domain 1 340 442 - -
Cma14g00263 677 Gene3D Ribonuclease Inhibitor 110 234 IPR032675 -
Cma14g00263 677 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Cma14g00263 677 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Cma14g00263 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 668 - -
Cma14g00263 677 SUPERFAMILY Protein kinase-like (PK-like) 371 644 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00435 Cma14g00263 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00263 Cma-Chr14:1137576 Cma18g01004 Cma-Chr18:8432568 9.30E-177 dispersed
Cma14g00263 Cma-Chr14:1137576 Cma06g00435 Cma-Chr6:2015651 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69054 PF00069 Pkinase 2.50E-34 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00263 - - bhj:120091526 1130.16