Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00279 ATGGAAATGCCCGGCAGGAGATTGAACTACACGCTTCTCAGTCAAATTCCAGACGACCAGTACAGTGGCGGCGTTGCTGTGGCTGGAGCCGGAGCTTCGACATCGTTGATAGAAACATCATCAGGAGAGGGGAAGAACGACAGGAGGAAGTTGGAAAGAGGATTGGATTGGGAAGCGGGTGGTGATCACAGGGCGGGCCAGCAGCAGCAGGTTAATTGGATCGGTAATATGCACTCGACGTTTGGTTTGCAGAGGCAGTCCAGTGGAAGCAGCTTTGGAGAGAGCTCGATATCCGGGGAGTACTATGCACCGACACCATCAACTACGGTGGCTAACGAGACGGATGCGTTTGGGTGTACGCACGATGATCTGCTTAGGATTGGAGGCGATTCGAGACCACAGACAGCCGAGATGGCCGCTGGGACTGGAGGATCTTCTAGTAAGAGCTGGGCGCAACAGACGGAGGAGAGTTATCAACTGCAGCTGGCATTGGCGCTTCGGCTTTCATCTGTGGCGACTTGTGCTGATGATCCTAATTTCTTAAATCCATTTCAGGATGATTCAGCTTTAAGGAGGTCGATTAGCTCTGCTGAGGCTGTGTCACATCGATTTTGGGTGAATGGCTGCCTATCATACTTTGACAAGGTTCCTGATGGGTTTTATTTAATCCATGGAATGGATCCATATGTATGGACTGTATGCACCAGCCTGCCTGATAATGATCGCATGCCATCAATTGAATCTCTAAAGTCTGTTGATCCTATCACTGATTCTTCAATTGAAGTTGTTCTGATTGATCGGCGCACTGATCCCAACTTAAAAGACCTCCAAAATTGGGTCCAAAGCGTTTCTTGCACCTCTATAACCACAGAAGAGGTTGTAGACCAGCTTGCAAAACTTGTCTGTAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGTGTTGGAGTCGATATGGAGGGAGTGCAGTGATAACTTGAAGGAGACCTTAGGCTCAGTGGTTGTTCCTCTTGGTGGACTCTCTGTAGGACTCTGCCGGCATCGTGCACTTCTTTTTAAAGTGTTAGCTGACACAATTGATTTACCCTGTCGTGTAGCCAAGGGCTGTAAATATTGCTCACGCCATGATTCTTCTTCTTGTCTTGTTCAGTTTGGGCTTGACAAGGAGTATCTGGTTGACTTGATTGGAAATCCTGGTTGCTTGTATGAGCCTGATTCTTTGCTCAATGGCCCATCCTCCATTTTGATCTCCTCGCCATTGCGACTTCCACGACTAAAGCCAGTAGAGCCGGCTATTGATTTCAGGTCACTGGCTAAACAGTACTTTTCAGATTGCCAATTGCTTAATGTTGTTTTCGATGAAGCTTCCTCATGTAATTACTCAGAAAATACAGTGGACGGAGAAGATAGCGCACTCCCCTTGTATCTAAAGCAGTTTGATAGAAAGTTCACCAACAGAAGCAACCAAATGCTCGTCCCTGGTGAAAATGATGAAAAATCCATTTTACTGCATGCAAAAACTTCGCAGCCTAATTCCCAAGACAGAGATTTCCTACTTAAACTGCGTGATAATTCTCATAATGCTATACAACCAACTGTCCTGGTTGAGGATTCAATCCCACTGAAGTACGTTCCACATATTAGCCGTGTAAGTGCGCAGTCATATTTGGATATGTCCCACCCAAGGATGGATTCTACTATGGACGTAAGGTTTCAACAGGGAGGTCAGCTAATACCAAGCACACGGAGTAAAACACTTCCCCTTGGTGCAGAGGATTTGGACATTCCATGGAATGATCTTGTTTTAAAAGAAAGAATTGGAGCAGGTCATTCTGAGCGTATCGTTGGTGTAATTTCAGGTTCCTTCGGAACTGTGCATCGTGCTGATTGGCATGGATCGGAAGTTGCTGTGAAGATCCTAACAGAACAAGACTTCCATCCTGAACGTGTTAATGAGTTTCTGAGAGAGGTTGCTATCATGAAATCCTTACGACATCCTAATATTGTACTGTTCATGGGTGCCGTGACCAAGCCACCAAACCTGTCCATTGTCACTGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCATAAGTCAGGTGTCAAAGACATTGATGAAACACGTCGGATAAATATGGCTTTTGATGTGGCAAAGGGAATGAACTATCTCCATAGACGTGATCCTCCAATTGTTCATCGCGATCTAAAATCACCGAATCTTTTAGTTGACAGGAAGTATACAGTAAAGCCTGAATGGATGGCACCAGAGGTACTACGTGATGAGCCGTCAAATGAAAAGTCAGATGTTTACAGCTTTGGAGTGATTTTGTGGGAGTTAGCAACTTTGCAACAGCCATGGTGTAATCTAAACCCAGCTCAGGTTGTTGCAGCTGTTGGATTTAAGGGCTTAAGGCTTGAAATCCCACGTGATGTAAATCCCAAATTGGCTTCCTTAATAATGGCTTGCTGGGCCGATGAGCCCTGGAAACGTCCATCTTTTTCCAGCATAATGGAGACCTTGAAGCCAATGACTAAACAAGCACCACCTCAACAAGAGAATCCACAGCCTCAACTCTTTGGCGGCGTCTTAATGGGGTGCCGGCACGAGCAACGGTTCAACTGTAGAGCTGCTACGACTCGATTCCCAGTCACTGTCTCCACCGCCTTTGAATTTCTTTCCCCAGATTTTTATCGAACACTTCGTCGGCGTAATTCTCCTTCTATCGGAGGCTTTTCTGTTCAAAACCCAATGTCATCTTCTTCTGCACACTACCTGTTCGACGTTATGCTTGAACCAGATATAGGAGTTTCGGACCCATATGTGGTGCCGTGTATGGGAAGTGATCTGCCTCAACCTCTAGAATGTCTTCATGGCCAGCTAGTTCCGCCATTTCTGTGGAAGACTTTCGATCTTGTTGAGGATCCTGCGATTGATCCGATTGTATCTTGGGGTTCAGCAGGGCAGAGCTTTGTGGTTTGGGATCCCGTGGAGTTTTCTAGAGTCATTCTTCCTTCTAATTTCAAGCATAACAACTTCTCCAGTTTTGTCAGACAGCTAAATACTTATGTGGGTATTGCACTACAGCCTTCAATGGCTGCTGTGGGGTTCCGCAAGATTGATACAGACAAGTGGGAATTTGCAAATGTAGCTTTCCAACGAGGGAAGAAATACTTATTAAAGAACATTCAGAGGCGCAAATCACCTCATTCAGAGCAGGTTGGAAGTTTGATAGGGCCATCTACTGGTGGAGGGAAGTCTGGATTAGAAGATGAAATTGGGAAGTTAAAGAAAGAGAGGAGCATGTTATTGCAGGAGGTTGTTGAATTGCAGCAGCAGCATAAGGGAACTGCTCAGCATGTCATCACGGTGAACCGACGCCTCCGGTCAGCAGAGCAGAGACAGAAGCAGATGATTACTTTCTTGTCGAAGTTACTTCGGAATCCAGAACTCTTGTTTCACCTGAAGAAAAATAAGGAACCGAAAGATATCGATTCCGAGAGAATCAAGCGGAAATTTGTTAAGCAGCATAAACACGATGGTTGTACACTGTCCATGGAAGGGAAGATCGAAACAGCAATGGATTTGAATCCAAGCCTGTTTGAAGGACCTTCTGCCTACCTTATGCAGGGAATGGGATCATTTCCAGATAGCATACCCGATTTTCAACTTATGAATGCTTCATCAAGTGATTTAATTGCGTCTGAGGAATTAGCATTCCATGATGGAATTGTAAAACCAAGAGAGGAGCTGAGGATAGAGGCTTCGAAGGCTATTGGGAGTCCTGACTATTTTGGCTCTTTGGCAGAGGATATTCTACAGTCCTCACATCATGGAACTGGAAGTATCATTAAACCAGAAGAAATTTGGAATGCATACTTGAATGTCGATGCTAGTACGCCCGGTTCGAGCAACGAGTTGTGGAGCAATCCAGTCGGCTTTGAGGATCAATTTTGGCAAGTTTCTTGCGGACAGTCTCCAATCTGGGATTTAGGCTCCCAGCAGGCTGGAGATTTGGGCATGGACAAGTGA 4032 45.59 MEMPGRRLNYTLLSQIPDDQYSGGVAVAGAGASTSLIETSSGEGKNDRRKLERGLDWEAGGDHRAGQQQQVNWIGNMHSTFGLQRQSSGSSFGESSISGEYYAPTPSTTVANETDAFGCTHDDLLRIGGDSRPQTAEMAAGTGGSSSKSWAQQTEESYQLQLALALRLSSVATCADDPNFLNPFQDDSALRRSISSAEAVSHRFWVNGCLSYFDKVPDGFYLIHGMDPYVWTVCTSLPDNDRMPSIESLKSVDPITDSSIEVVLIDRRTDPNLKDLQNWVQSVSCTSITTEEVVDQLAKLVCRSLGGSVSGEDVLESIWRECSDNLKETLGSVVVPLGGLSVGLCRHRALLFKVLADTIDLPCRVAKGCKYCSRHDSSSCLVQFGLDKEYLVDLIGNPGCLYEPDSLLNGPSSILISSPLRLPRLKPVEPAIDFRSLAKQYFSDCQLLNVVFDEASSCNYSENTVDGEDSALPLYLKQFDRKFTNRSNQMLVPGENDEKSILLHAKTSQPNSQDRDFLLKLRDNSHNAIQPTVLVEDSIPLKYVPHISRVSAQSYLDMSHPRMDSTMDVRFQQGGQLIPSTRSKTLPLGAEDLDIPWNDLVLKERIGAGHSERIVGVISGSFGTVHRADWHGSEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGVKDIDETRRINMAFDVAKGMNYLHRRDPPIVHRDLKSPNLLVDRKYTVKPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCNLNPAQVVAAVGFKGLRLEIPRDVNPKLASLIMACWADEPWKRPSFSSIMETLKPMTKQAPPQQENPQPQLFGGVLMGCRHEQRFNCRAATTRFPVTVSTAFEFLSPDFYRTLRRRNSPSIGGFSVQNPMSSSSAHYLFDVMLEPDIGVSDPYVVPCMGSDLPQPLECLHGQLVPPFLWKTFDLVEDPAIDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYVGIALQPSMAAVGFRKIDTDKWEFANVAFQRGKKYLLKNIQRRKSPHSEQVGSLIGPSTGGGKSGLEDEIGKLKKERSMLLQEVVELQQQHKGTAQHVITVNRRLRSAEQRQKQMITFLSKLLRNPELLFHLKKNKEPKDIDSERIKRKFVKQHKHDGCTLSMEGKIETAMDLNPSLFEGPSAYLMQGMGSFPDSIPDFQLMNASSSDLIASEELAFHDGIVKPREELRIEASKAIGSPDYFGSLAEDILQSSHHGTGSIIKPEEIWNAYLNVDASTPGSSNELWSNPVGFEDQFWQVSCGQSPIWDLGSQQAGDLGMDK 1343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1176406 1190173 + CmaCh14G002790.1 Cma14g00279 307262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00279 1343 Pfam Protein kinase domain 619 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00279 1343 SUPERFAMILY Winged helix DNA-binding domain 962 1066 IPR036390 -
Cma14g00279 1343 SMART serkin_6 612 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00279 1343 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 750 852 - -
Cma14g00279 1343 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 138 749 - -
Cma14g00279 1343 Pfam HSF-type DNA-binding 965 1066 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma14g00279 1343 SMART hsfneu3 961 1066 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma14g00279 1343 Gene3D Phosphorylase Kinase; domain 1 593 689 - -
Cma14g00279 1343 Gene3D Transferase(Phosphotransferase) domain 1 690 859 - -
Cma14g00279 1343 CDD STKc_MAP3K-like 619 841 - -
Cma14g00279 1343 Gene3D - 958 1067 IPR036388 -
Cma14g00279 1343 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 138 749 - -
Cma14g00279 1343 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 750 852 - -
Cma14g00279 1343 Coils Coil 1086 1113 - -
Cma14g00279 1343 SUPERFAMILY Protein kinase-like (PK-like) 619 841 IPR011009 -
Cma14g00279 1343 Pfam Ethylene-responsive protein kinase Le-CTR1 197 401 - -
Cma14g00279 1343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Cma14g00279 1343 PRINTS Heat shock factor (HSF) domain signature 965 988 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma14g00279 1343 PRINTS Heat shock factor (HSF) domain signature 1003 1015 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma14g00279 1343 PRINTS Heat shock factor (HSF) domain signature 1016 1028 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cma14g00279 1343 ProSiteProfiles Protein kinase domain profile. 611 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00445 Cma14g00279 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma09g00596 Cma-Chr9:2765119 Cma14g00279 Cma-Chr14:1176406 0 dispersed
Cma14g00279 Cma-Chr14:1176406 Cma11g00994 Cma-Chr11:5353144 2.68E-36 dispersed
Cma14g00279 Cma-Chr14:1176406 Cma03g01176 Cma-Chr3:7858266 0 wgd
Cma14g00279 Cma-Chr14:1176406 Cma06g00445 Cma-Chr6:2054179 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36182 PF00069 Pkinase 2.90E-37 CL0016 Cma TF
69055 PF00069 Pkinase 2.90E-37 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00279 K14510 - csv:101208452 1477.61