Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00431 ATGTTCCATGGAAACAGAGAATCATCAAACTGGACCGTGGTTTTTGGAGAAATGCTCCAACAGCGTCTGTTTGGGTATTTTAATGTCGTTTTCTATTTGACGATTCTGACATCGCTGGCTAGGGCCTTCACTAATCCGTCGGATGTTGCAGCTCTTCAGGATCTGTACAGTGCCATGAACTATCCACTCGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCTTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTTCTCTGTAATGTACCTTAAGCTCCATGGACTAAATCTCACTGGGAATCTTGGAGGACAGCTTAACAATCTCATAAATTTGAAGCAAATGGATGTTAGCTCTAATAGACTTACGGGTGAAATTCCGCACAACTTGCCTCCTAATGCGACTCATATAAATATGGCATTCAACCGTTTAAGCAAAAATCTTCCACATACTTTATCTTACATGGGAAATCTCCGACATATAAATCTGAGCCATAATACTCTATCTGGTGTGCTTGGAAATGTGTTTGCTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTTGCTGGAGATTTGCCAAATTCCTTCAGTTCTCTGACGAACATCACTAGACTGTTCTTGCAGCATAACCAATTCACTGGATCAGTTGCCTACTTGTCCCACCTTCCATTAATTGACTTGAACATCCAAGACAATTATTTTAATGGCATTATTCCAGACAATTTTAGAAACATTCCAAATTTGTGGATTGGGAGCAATAGGCTTCGTCCACAAGTTAATTCTCCACCCTGGGATTTTCCCCTGGGAAAAGATCCTATAATGCAGAACATCAGTGGTCCTCCAACAACCAAGTCAAACGCCATCCAGAATTATCCCTCTCGTGGTGCCGTGAGGCATGAGAAGAGAAGGCATGGTTCTGGTGGAATAGGTCTCCTGGTAGGAGGAGTGACACTAGTAGTAACCTTCGCAGCTCTCTTTGTCGTATTTTCCATGAAGAAAGTTCATGAAAAGAAAATAAATTTGAAGATTAGCAATACGTTACCTCGTTCTCTTTCTCTGGGCAAAGCTGAAGATGGTTCGTCAACTGCACCTGAAGAAGGCTCACAAAGCTTGCCCCTGAGTTCTCAATTCATGGGCTGTCCAAGGCCTATACCTATATTAAATCACACGAGAACAGAGAAATTTTCAGGAAGAAAAGGTTTCTCAAACAGATGTAGGCTCCCAGTGAGAACAAAAATTTACACCCTGGCAGAGGTTCAATCCACTACAAACAACTTTAGTCAAGAGAATCTTCTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCAGTAAAAAATCTCAACATGGGAGCTCTCTCCTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGGGGCACCCGAACATTGTTACGCTGCTTGGATATTGTGTAGAGCATGGACAACATATTCTCGGATATGAATACGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAATTGCTAGGGCTTTAGATTATTTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAGTCTGAAGGCTGCCAACATCTTACTTGATGAAGAACTGATGCCTCGTATTTGTGATTGTGGGCTGTCTGTTTTGAGGCCATTTGTGACCAATGGAGTTAAAACGAAGGCTTCAGAGATTGTCAGCGGTGACATAGGCTACCTTGCACCTGAACATGGGCAGCCAGGATTTGATAATACTAGAAGTGACGTGTATACCTTTGGGGTGTTGCTTTTGGAGCTTGTCACAGGAAGAAAACCATTTGACAATTCGAAACCGAGGGAAGAGCAATCGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAAGCATTAAAGGAACATTTTCCTCCAAGTCCCTCTCACGCTTTGTCGATATCATCTCCCTTTGTATACAGCCTGCGAAGGAATTCCGACCACCAATGTCCGAAATAGTGGAACATTTAACGAACCTTCAAAGGAAGATGGAGAAAGCCGAACGTGCTGCTATAGAAGGAACTGAAGTGGATCTTTTTGAAAAATCATTTCGTTCTACCAACACTGGCTACGTAATCTCAGTTTACACTCCGCGCTGCTCTGCTCTGCTTTCTTTGGACCTTTTGACGTTCTTTACTGTTCGAAAATCTACGAGAAGCAGTTCGACTGACCCGAAATTTCTACATTCCTCGTTACATTTCCGCTCTGCTCTGCTGATTCGTTTTGCGGATTGCGATTGA 2394 43.02 MFHGNRESSNWTVVFGEMLQQRLFGYFNVVFYLTILTSLARAFTNPSDVAALQDLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGFSVMYLKLHGLNLTGNLGGQLNNLINLKQMDVSSNRLTGEIPHNLPPNATHINMAFNRLSKNLPHTLSYMGNLRHINLSHNTLSGVLGNVFAGLQNLREMDLSYNDFAGDLPNSFSSLTNITRLFLQHNQFTGSVAYLSHLPLIDLNIQDNYFNGIIPDNFRNIPNLWIGSNRLRPQVNSPPWDFPLGKDPIMQNISGPPTTKSNAIQNYPSRGAVRHEKRRHGSGGIGLLVGGVTLVVTFAALFVVFSMKKVHEKKINLKISNTLPRSLSLGKAEDGSSTAPEEGSQSLPLSSQFMGCPRPIPILNHTRTEKFSGRKGFSNRCRLPVRTKIYTLAEVQSTTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNLNMGALSFTEEEQFLDVVWTASRLGHPNIVTLLGYCVEHGQHILGYEYVRNLSLDDALHCEAYMPLSWTVRLQIALGIARALDYLHTSFFPPFAHCSLKAANILLDEELMPRICDCGLSVLRPFVTNGVKTKASEIVSGDIGYLAPEHGQPGFDNTRSDVYTFGVLLLELVTGRKPFDNSKPREEQSLVKWASSRLHDNESLEQMVDPSIKGTFSSKSLSRFVDIISLCIQPAKEFRPPMSEIVEHLTNLQRKMEKAERAAIEGTEVDLFEKSFRSTNTGYVISVYTPRCSALLSLDLLTFFTVRKSTRSSSTDPKFLHSSLHFRSALLIRFADCD 797
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2014953 2021500 + CmaCh14G004310.1 Cma14g00431 307414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00431 797 SUPERFAMILY L domain-like 44 255 - -
Cma14g00431 797 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 25 720 - -
Cma14g00431 797 SUPERFAMILY Protein kinase-like (PK-like) 408 709 IPR011009 -
Cma14g00431 797 SMART LRR_typ_2 157 180 IPR003591 -
Cma14g00431 797 SMART LRR_typ_2 111 135 IPR003591 -
Cma14g00431 797 SMART LRR_typ_2 181 204 IPR003591 -
Cma14g00431 797 SMART LRR_typ_2 205 228 IPR003591 -
Cma14g00431 797 MobiDBLite consensus disorder prediction 358 381 - -
Cma14g00431 797 Gene3D Ribonuclease Inhibitor 44 276 IPR032675 -
Cma14g00431 797 Pfam Leucine rich repeat N-terminal domain 46 86 IPR013210 -
Cma14g00431 797 Pfam Leucine rich repeat 135 194 IPR001611 GO:0005515
Cma14g00431 797 Gene3D Phosphorylase Kinase; domain 1 397 509 - -
Cma14g00431 797 ProSiteProfiles Protein kinase domain profile. 432 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00431 797 Gene3D Transferase(Phosphotransferase) domain 1 510 734 - -
Cma14g00431 797 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 720 - -
Cma14g00431 797 Coils Coil 701 728 - -
Cma14g00431 797 Pfam Protein kinase domain 433 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00431 Cma-Chr14:2014953 Cma18g00568 Cma-Chr18:3822270 1.76E-174 dispersed
Cma14g00431 Cma-Chr14:2014953 Cma14g00432 Cma-Chr14:2021563 0 tandem
Cma14g00431 Cma-Chr14:2014953 Cma06g00088 Cma-Chr6:488977 5.17E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69060 PF00069 Pkinase 2.30E-33 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00431 - - cpep:111791529 1391.33