Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00434 ATGGCTTCTTCCAATATTAAGAACCAGGAAGAAGAACAAACTCCTTCATTATTCAGCTTCCAAAACAACAATTTTGCTGATCAATTACCCTTCTCCATGAATCTACCTTCCATTTCTTCAAATTTCATAACCAAAGATGGAGGAGGTGATGATTTGGGAGAATTGGATCAAGCCCTTTTTCTGTATCTGGATGGACAAGAACCCTCTTCAACCACTACTACTCATCACCAATCACAGAGCTCAAGCATGAGACCGCCGATGTTGAACATCTTTCCGTCACAGCCGATGCATGTCGACCCGTTGCTGATAAAAGGAAGCACAGCAATGATTAACCATGGTGATTCAAAGATCAAACCATCAGAGCCGTCCAAAGAGTTGGCCAACCAACGCAGCAATGGAGCCATCGTATCCGGAACAACCCTAACCCAAACTACGACAACCGAACCTCATCCCAAACCTCCAAAACGTGAAGCCAACAAGAAAGGGCTGACCTCAAGCTCAGAGCAAGAAGGCCCCAAAACTCCAGACCCCAAGACCCTTAGAAGACTGGCTCAGAATCGAGAGGCTGCTCGAAAAAGCAGGCTGAGAAAAAAGGCGTATGTTCAGCAGCTAGAATTGAGTAGGATTAAGCTCACGCAGCTGGAGCAAGAGCTACAAAGAGCAAGAACTCAAGGTATGTTTCTCGGCGGTGGCAGTGGCGTGTTCGACATCGAATACGGGCGGTGGCAAGAGGAGCACCACCGCTTGATGTGCGAGCTCCGAGCAGCGGTGCAAGAACATCTACGGGAAAACGAACTGCGGTTGTTCGTCGATAGTTGTCTGGCTCATTACGACGAGGTTCTTAACTTGAAGATGATGGTTGCTAGGTCCGACGTCTTCCACCTTGTCTCCGGCATGTGGAAGACCCCGGCGGAGAGATGCTTCATGTGGATCGGCGATTTTAGGCCCTCTGAGCTTATTAAGCATCAACTAATGAACATTTGTGGACTGCAACAATCAACACAAGAGAGTGAGGAAGCATTGTCTCAAGGGCTTGAAGCCCTAAACCAGTCCTTATCAGACACCATCACCTCTGATTCATTGAGTACCCCTCCCAATATGGCTAACTATATGGGGCAGATGACCTTAGCCATCAACAAGCTCTCCTCTCTTGAAGCCTTTGTAAGACAGGCGGACAATTTGAGGCACCAAACACTTCACCGATTGCATCAAATGTTAACGACTCGTCAAGCCGCAAGGTGTTTGCTAGCCATTGCAGAGTATTTCCATCGACTTCGAGCTCTTAGTTCCTTGTGGTTGGCTCGTCCAAGGCAAGATTAA 1320 47.73 MASSNIKNQEEEQTPSLFSFQNNNFADQLPFSMNLPSISSNFITKDGGGDDLGELDQALFLYLDGQEPSSTTTTHHQSQSSSMRPPMLNIFPSQPMHVDPLLIKGSTAMINHGDSKIKPSEPSKELANQRSNGAIVSGTTLTQTTTTEPHPKPPKREANKKGLTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLELSRIKLTQLEQELQRARTQGMFLGGGSGVFDIEYGRWQEEHHRLMCELRAAVQEHLRENELRLFVDSCLAHYDEVLNLKMMVARSDVFHLVSGMWKTPAERCFMWIGDFRPSELIKHQLMNICGLQQSTQESEEALSQGLEALNQSLSDTITSDSLSTPPNMANYMGQMTLAINKLSSLEAFVRQADNLRHQTLHRLHQMLTTRQAARCLLAIAEYFHRLRALSSLWLARPRQD 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2044200 2048605 + CmaCh14G004340.1 Cma14g00434 307417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00434 439 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 181 196 IPR004827 GO:0003700|GO:0006355
Cma14g00434 439 ProSiteProfiles DOG1 domain profile. 232 435 IPR025422 GO:0006351|GO:0043565
Cma14g00434 439 Coils Coil 197 224 - -
Cma14g00434 439 MobiDBLite consensus disorder prediction 111 181 - -
Cma14g00434 439 CDD bZIP_HBP1b-like 178 230 - -
Cma14g00434 439 Pfam bZIP transcription factor 178 214 IPR004827 GO:0003700|GO:0006355
Cma14g00434 439 Pfam Seed dormancy control 250 321 IPR025422 GO:0006351|GO:0043565
Cma14g00434 439 PANTHER TRANSCRIPTION FACTOR TGA9 233 438 - -
Cma14g00434 439 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 233 438 - -
Cma14g00434 439 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 220 IPR004827 GO:0003700|GO:0006355
Cma14g00434 439 MobiDBLite consensus disorder prediction 67 86 - -
Cma14g00434 439 Gene3D - 177 227 - -
Cma14g00434 439 MobiDBLite consensus disorder prediction 124 149 - -
Cma14g00434 439 PANTHER TRANSCRIPTION FACTOR TGA9 64 230 - -
Cma14g00434 439 SMART brlzneu 174 255 IPR004827 GO:0003700|GO:0006355
Cma14g00434 439 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 64 230 - -
Cma14g00434 439 SUPERFAMILY Leucine zipper domain 178 220 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00434 Cma-Chr14:2044200 Cma14g00509 Cma-Chr14:2477165 4.50E-117 dispersed
Cma14g00434 Cma-Chr14:2044200 Cma06g00087 Cma-Chr6:480546 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36198 PF14144 DOG1 9.00E-30 No_clan Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00434 K14431 - csv:101204923 697.967