Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00483 ATGGCTTCTGGGGCTCGATTGCTTGTGTTGGATTTTGCCCTATCTTTTATGTGGTTATGGTCGGGGGTTTTGGTTAAGATCTTTGTTTTCGGGTTATTGGGGTTCGGAAATGATCCGATTGGCGAGGTTGTCAAGGCTGCCTTTTCGATTCTTAACATGTTCTTGTTCGCGTTCTTGGTGGAAATTTCCAAAGGGGCGGCTTACAATCCTCTTAATGTCTTGTCGGCTGCTTTTTCTGGGGGTTTCAGTAGCTTTCTCTTCACTGCTGGTGCCAGAATTCCTGCTCAGGTACTTGGAGCTGTCACTGCTGTTAGGCTGATTATCCACACGTTTCCCGAAGCAGGACGAGGACCCCGTTTGAACGTTGGCATCCATCACGGTGCGTTGACAGAAGGGTTGTTAACGTTCGGCATCGTCTTCATCTCACTCGGACTTTCAAAAAAAATCCCTGGAAATTTCTTCATGAAGACTTGGATCTCAAGTTTCTCCAAGTTAACACTTCATGTTCTTGGTTCTGACTTAACTGGTGGCTGTATGAACCCCGCATCCGTAATGGGATGGGCATACGCTCGTGGGGAACATATAACGAAAGAACACATTCTTGTATACTGGATTGCTCCGATTCAAGGAACTATAGCAGCGGTATCGACGTTTAAGGTACTATTTCGAAAACCGAAAGAGGAGGAAGTAAATACAAAGAAGAAATCAGAATGA 714 45.38 MASGARLLVLDFALSFMWLWSGVLVKIFVFGLLGFGNDPIGEVVKAAFSILNMFLFAFLVEISKGAAYNPLNVLSAAFSGGFSSFLFTAGARIPAQVLGAVTAVRLIIHTFPEAGRGPRLNVGIHHGALTEGLLTFGIVFISLGLSKKIPGNFFMKTWISSFSKLTLHVLGSDLTGGCMNPASVMGWAYARGEHITKEHILVYWIAPIQGTIAAVSTFKVLFRKPKEEEVNTKKKSE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2359406 2362480 + CmaCh14G004830.1 Cma14g00483 307466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00483 237 Gene3D Glycerol uptake facilitator protein. 3 236 IPR023271 -
Cma14g00483 237 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00483 237 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00483 237 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00483 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00483 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00483 237 SUPERFAMILY Aquaporin-like 6 235 IPR023271 -
Cma14g00483 237 PANTHER AQUAPORIN SIP2-1-RELATED 4 237 IPR044226 GO:0015267
Cma14g00483 237 Pfam Major intrinsic protein 47 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00483 237 PANTHER AQUAPORIN SIP2-1-RELATED 4 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g01173 Cma-Chr7:6432221 Cma14g00483 Cma-Chr14:2359406 6.82E-33 dispersed
Cma14g00483 Cma-Chr14:2359406 Cma06g00045 Cma-Chr6:256302 6.81E-143 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00483 K09875 - csv:101214379 404.06