Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g00498 | ATGGGATACTTACAATCCCTTGGCTGTCTCCTTCAAAGTGCAAAGCCTTACATCGTTGTCATCTCCCTCCAATTTGGCTATGCCGGAATGAATATTATCTCTGCCATCTCCCTCGACCGCGGTATGAGCCACTACGTTCTCGTCGTCTACCGCCACGCCTTTGCCACTGTCATCATGGCACCTTTTGCTCTTGTTTTTGAGAGAAAAATGATACCCAAGATTACACTTAAGATTTTCGCTCAGCTGTTTGTTCTAGCTCTTCTTGGGCCACTAATTGATCAGAACTTCTACTACTTGGGGATAAAAATGACATCCCCAACTTTTGCATGTGCCATAAGCAACACGCTTCCTTCAATGACATTCATCATGGCGCTTCTTTGTAGAATGGAGAAGTTGGAGTTGAAGAGCGTGAGATGCCAAGCCAAGGTGTTTGGAACAATAGTGACGATGGTGGGAGCCATGTTGATGACATTTTATAAAGGAAGTGTCATCAACTTCTTCTGGACTGGGCATGGCCGCCACCCAAACACACCACTCACGGCGGATGCGGCCGCGGCGTCCAACCTTCACAACGACGGAAAGGTCATCAAAGGCTCCATCTTCCTCATCATCGCCACTCTGGCTTGGGCGGCCTTCTTCATTCTGCAAGTCATAACCATGAGAAAATACACAGCCCATCTTTCTCTCACCACCATGGTTTGCTTTTTAGGAACCCTTCAAGCCATTATTGTCACCCTCGCCATGGAGCACCGCCCTCACGCCTGGGCCATTGGCTGGGACATGAACCTTCTGGCCGCCGCTTATGCGGGGATTGTGACCTCAGGGTTGGCATATTATCTTCAAGGTTTGGTTATGAAAACAAAAGGGCCAGTTTTTGTTACAGCTTTTTGCCCTCTGGGGACAGCGATTGTTGCCTTCATGGGCTCTCTCATCTTGGCTGAAAAGATTTATGTTGGAGGGATAATTGGAGCAGTGCTGATTGCGACAGGGCTGTACTGTGTCTTGTGGGGTAAATGTAAGGATGTTGAAGACAGTGCTGAAGCAGTGAAAGGTGAAGAATTGCCTGTCAAAAACGAAGCCATTGAAGCAACTCAAAAGAAAGAAGCTTTGGTTCTTAGTATTCGACCCAACATGGAGAAGAAGCTTCAGCAAACTAATCACCCAAATTAA | 1170 | 47.26 | MGYLQSLGCLLQSAKPYIVVISLQFGYAGMNIISAISLDRGMSHYVLVVYRHAFATVIMAPFALVFERKMIPKITLKIFAQLFVLALLGPLIDQNFYYLGIKMTSPTFACAISNTLPSMTFIMALLCRMEKLELKSVRCQAKVFGTIVTMVGAMLMTFYKGSVINFFWTGHGRHPNTPLTADAAAASNLHNDGKVIKGSIFLIIATLAWAAFFILQVITMRKYTAHLSLTTMVCFLGTLQAIIVTLAMEHRPHAWAIGWDMNLLAAAYAGIVTSGLAYYLQGLVMKTKGPVFVTAFCPLGTAIVAFMGSLILAEKIYVGGIIGAVLIATGLYCVLWGKCKDVEDSAEAVKGEELPVKNEAIEATQKKEALVLSIRPNMEKKLQQTNHPN | 389 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2435324 | 2438057 | - | CmaCh14G004980.1 | Cma14g00498 | 307481 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g00498 | 389 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 235 | 338 | - | - | |
Cma14g00498 | 389 | PANTHER | WAT1-RELATED PROTEIN | 11 | 363 | IPR030184 | GO:0016021|GO:0022857 | |
Cma14g00498 | 389 | PANTHER | WAT1-RELATED PROTEIN | 11 | 363 | - | - | |
Cma14g00498 | 389 | Pfam | EamA-like transporter family | 197 | 335 | IPR000620 | GO:0016020|GO:0016021 | |
Cma14g00498 | 389 | Pfam | EamA-like transporter family | 16 | 157 | IPR000620 | GO:0016020|GO:0016021 | |
Cma14g00498 | 389 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 50 | 159 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma06g00017 | Cma14g00498 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma04g02354 | Cma-Chr4:16332522 | Cma14g00498 | Cma-Chr14:2435324 | 3.49E-123 | dispersed | |
Cma14g00498 | Cma-Chr14:2435324 | Cma18g00826 | Cma-Chr18:7215575 | 2.53E-156 | dispersed | |
Cma14g00498 | Cma-Chr14:2435324 | Cma14g00500 | Cma-Chr14:2443061 | 1.98E-101 | proximal | |
Cma14g00498 | Cma-Chr14:2435324 | Cma03g00157 | Cma-Chr3:2070672 | 2.04E-139 | wgd | |
Cma14g00498 | Cma-Chr14:2435324 | Cma06g00017 | Cma-Chr6:119518 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g00498 | - | - | bhj:120090189 | 589.341 |