Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00498 ATGGGATACTTACAATCCCTTGGCTGTCTCCTTCAAAGTGCAAAGCCTTACATCGTTGTCATCTCCCTCCAATTTGGCTATGCCGGAATGAATATTATCTCTGCCATCTCCCTCGACCGCGGTATGAGCCACTACGTTCTCGTCGTCTACCGCCACGCCTTTGCCACTGTCATCATGGCACCTTTTGCTCTTGTTTTTGAGAGAAAAATGATACCCAAGATTACACTTAAGATTTTCGCTCAGCTGTTTGTTCTAGCTCTTCTTGGGCCACTAATTGATCAGAACTTCTACTACTTGGGGATAAAAATGACATCCCCAACTTTTGCATGTGCCATAAGCAACACGCTTCCTTCAATGACATTCATCATGGCGCTTCTTTGTAGAATGGAGAAGTTGGAGTTGAAGAGCGTGAGATGCCAAGCCAAGGTGTTTGGAACAATAGTGACGATGGTGGGAGCCATGTTGATGACATTTTATAAAGGAAGTGTCATCAACTTCTTCTGGACTGGGCATGGCCGCCACCCAAACACACCACTCACGGCGGATGCGGCCGCGGCGTCCAACCTTCACAACGACGGAAAGGTCATCAAAGGCTCCATCTTCCTCATCATCGCCACTCTGGCTTGGGCGGCCTTCTTCATTCTGCAAGTCATAACCATGAGAAAATACACAGCCCATCTTTCTCTCACCACCATGGTTTGCTTTTTAGGAACCCTTCAAGCCATTATTGTCACCCTCGCCATGGAGCACCGCCCTCACGCCTGGGCCATTGGCTGGGACATGAACCTTCTGGCCGCCGCTTATGCGGGGATTGTGACCTCAGGGTTGGCATATTATCTTCAAGGTTTGGTTATGAAAACAAAAGGGCCAGTTTTTGTTACAGCTTTTTGCCCTCTGGGGACAGCGATTGTTGCCTTCATGGGCTCTCTCATCTTGGCTGAAAAGATTTATGTTGGAGGGATAATTGGAGCAGTGCTGATTGCGACAGGGCTGTACTGTGTCTTGTGGGGTAAATGTAAGGATGTTGAAGACAGTGCTGAAGCAGTGAAAGGTGAAGAATTGCCTGTCAAAAACGAAGCCATTGAAGCAACTCAAAAGAAAGAAGCTTTGGTTCTTAGTATTCGACCCAACATGGAGAAGAAGCTTCAGCAAACTAATCACCCAAATTAA 1170 47.26 MGYLQSLGCLLQSAKPYIVVISLQFGYAGMNIISAISLDRGMSHYVLVVYRHAFATVIMAPFALVFERKMIPKITLKIFAQLFVLALLGPLIDQNFYYLGIKMTSPTFACAISNTLPSMTFIMALLCRMEKLELKSVRCQAKVFGTIVTMVGAMLMTFYKGSVINFFWTGHGRHPNTPLTADAAAASNLHNDGKVIKGSIFLIIATLAWAAFFILQVITMRKYTAHLSLTTMVCFLGTLQAIIVTLAMEHRPHAWAIGWDMNLLAAAYAGIVTSGLAYYLQGLVMKTKGPVFVTAFCPLGTAIVAFMGSLILAEKIYVGGIIGAVLIATGLYCVLWGKCKDVEDSAEAVKGEELPVKNEAIEATQKKEALVLSIRPNMEKKLQQTNHPN 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2435324 2438057 - CmaCh14G004980.1 Cma14g00498 307481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00498 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 338 - -
Cma14g00498 389 PANTHER WAT1-RELATED PROTEIN 11 363 IPR030184 GO:0016021|GO:0022857
Cma14g00498 389 PANTHER WAT1-RELATED PROTEIN 11 363 - -
Cma14g00498 389 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Cma14g00498 389 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Cma14g00498 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma06g00017 Cma14g00498 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02354 Cma-Chr4:16332522 Cma14g00498 Cma-Chr14:2435324 3.49E-123 dispersed
Cma14g00498 Cma-Chr14:2435324 Cma18g00826 Cma-Chr18:7215575 2.53E-156 dispersed
Cma14g00498 Cma-Chr14:2435324 Cma14g00500 Cma-Chr14:2443061 1.98E-101 proximal
Cma14g00498 Cma-Chr14:2435324 Cma03g00157 Cma-Chr3:2070672 2.04E-139 wgd
Cma14g00498 Cma-Chr14:2435324 Cma06g00017 Cma-Chr6:119518 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00498 - - bhj:120090189 589.341