Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00501 ATGGTCCTCTCTCTCATCCCTCTCTCTCTCCTCCTCCTCCTCCTCCTCCTCCTCGCCTACAACCTCTACAACCGCCTCCGCTTCAAGCTCCCACCGGGGCCACGCCCGCTTCCGGTGGTCGGAAACCTGTACGACGTGAAGCCGGTCCGGTTCCGATGCTACGCGGACTGGGCGAAGCAGTACGGTCCAATCATATCGGTGTGGTTCGGGTCGACGCTGAACGTGGTGGTGTCGAACACGGAGCTGGCGAGGGCGGTGCTGAAGGAGCACGACCAGAGCCTGGCTGACCGGCACCGGACTCGGTCGGCGGCGAAATTCAGCCGCGACGGGAAGGACCTGATTTGGGCGGACTATGGGCCCCACTATGTGAAGGTGAGGAAAGTGTGCACCATTGAACTGTTCTCCCCTAAGCGACTTGAATCGCTGAGGCCCATTCGAGAAGATGAAGTTTCCGCCATGGTTGAAGACATCTTCAAGCTCTGCACCAGTCCTGAGAAGTCAGGAAAGAGTGTGAAGGTGAGGGAATTTCTGGGAGCGGTTTCATTCAACAACATCACCAGACTCGCATTCGGGAAGAGGTTCGTCAACTCCGATGGCGTTATGGACGAGCAGGGCCTGGAATTCAAGGCCATTGTCGCCAATGGCCTCAAGCTCGGCGCCTCCCTGGCCATGGCTGAGCACATCCCTTGGCTTCGCTGGATGTTCCCTCTCGAAGAAGAAGCCTTCGCCAAGCATGGTGCCCGTCGCGACCGCCTCACTCGCGCCATCATGGAAGAGCACACCAAAGCTCGCAACCAGAGCGGCAATGTCAAGAACCACTTCGTTGATGCTCTACTTACTCTCCAAGATAAGTATGATCTCAGTGAAGACACTATCATCGGCCTCCTATGGGATATGATCACTGCCGGCATGGACACGACGGCGATTTCGGTGGAATGGGCGATGGCGGAGATCGTAAGGAACCCTAGAGTGCAGAAGAAGGTTCAGGAGGAACTAGACAATGCGGTTGGAGTAGATCGAATCATGACTGAGAACGACTTCTCGAACCTTCCGTATCTCCAATGCGTCGTGAAGGAGGCAATGAGATTACATCCACCGACGCCATTGATGCTGCCGCATCGATCAAACGCCAACGTGAAGATCGGCGGCTACGACATCCCCAAAGGCTCGAACGTGCATGTGAACGTGTGGGCAGTGGCACGTGACCCGGCGGTGTGGAAGAACGCAGAGGAATTTCGGCCGGAGAGGTTCTTAGAAGAGGATGTGGACATGAAAGGGCACGATCTCCGGCTGCTGCCATTCGGGGCAGGGCGGAGGGTATGCCCAGGGGCTCAATTGGGAATCAATTTGGTGACCTCAATGTTGGGGCACCTTCTGCACCACTTCGAATGGACACCGTCGCCGGGGATGAAGGCGGAGGAGATCGACATGTCGGAGAGCCCTGGATTGGTGTCGTACATGAAGACGCCAGTGCAGGCTGTGGCCACTCCCAGGCTGCCTTCGGGACTGTACAAACGCGTGTCTGTCGACATGTAA 1536 57.03 MVLSLIPLSLLLLLLLLLAYNLYNRLRFKLPPGPRPLPVVGNLYDVKPVRFRCYADWAKQYGPIISVWFGSTLNVVVSNTELARAVLKEHDQSLADRHRTRSAAKFSRDGKDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEDIFKLCTSPEKSGKSVKVREFLGAVSFNNITRLAFGKRFVNSDGVMDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTKARNQSGNVKNHFVDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRNPRVQKKVQEELDNAVGVDRIMTENDFSNLPYLQCVVKEAMRLHPPTPLMLPHRSNANVKIGGYDIPKGSNVHVNVWAVARDPAVWKNAEEFRPERFLEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWTPSPGMKAEEIDMSESPGLVSYMKTPVQAVATPRLPSGLYKRVSVDM 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2445850 2448525 + CmaCh14G005010.1 Cma14g00501 307484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00501 511 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Cma14g00501 511 PANTHER CYTOCHROME P450 98A3 10 504 - -
Cma14g00501 511 Pfam Cytochrome P450 31 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 Gene3D Cytochrome P450 24 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cma14g00501 511 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 504 - -
Cma14g00501 511 SUPERFAMILY Cytochrome P450 31 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01873 Cma-Chr1:12287289 Cma14g00501 Cma-Chr14:2445850 3.28E-49 dispersed
Cma09g00201 Cma-Chr9:832133 Cma14g00501 Cma-Chr14:2445850 2.81E-49 dispersed
Cma14g00501 Cma-Chr14:2445850 Cma14g01195 Cma-Chr14:9549364 4.10E-121 dispersed
Cma20g00305 Cma-Chr20:1493472 Cma14g00501 Cma-Chr14:2445850 3.11E-91 dispersed
Cma20g01100 Cma-Chr20:8558485 Cma14g00501 Cma-Chr14:2445850 2.91E-88 dispersed
Cma14g00501 Cma-Chr14:2445850 Cma01g00029 Cma-Chr1:123363 2.94E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00501 K09754 - csv:101217257 911.368