Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00502 ATGGAAATAGACCACGCCGAGCTTAGCACTGAGCAGGTTCTCACAAGGGACATTCCATGGGAGACATACATGACTACGAAACTTATCAGTGGAACAAGCCTTCAGCTGTTAAGGCGTTATGATAACAGGCCAGAGAGTTACAGGGCACAGTTGTTGGATGATGATGGTCCAGCATATGTTCGATTATTTGTTAGCATCTTACGTGATATATTTAAGGAAGAAACAGTGGAATATGTTCTAGCATTAATCGACGAAATGCTTACAGCAAACCCAAAAAGAGCAAGATTGTTCCATGATCCTTCTCTTGCAAGCGAAGATGCTTATGAACCTTTCCTAAGATTGCTTTGGAAGCGAAATTGGTTCATACAGGAGAAGAGCTGTAAAATACTTGCTCTGATAGTGAGTGCTAGAAAGACAACTTATGATGGCAGTTCTGCAAATGGTGATGTCTCAAATTCCAAGATGAAAATTACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCTAGTCGTGCTGTATCGACTTCTATCAATTGCCTTTCAACTCTGCTGAAGGAACCAAAGGCCAGATCCTCCTTTGTCCAGGCAGATGGAGTGAAATTGCTTATTCCTTTGATTTCTCCTGCATCGACCCAACAATCTACTCAGCTTCTATATGAAACCTGTCTTTGTGTTTGGCTCTTGTCATATTATGAGCCAGCAATTGAATTCTTGGCCACTTCTAGAACCCTTCCGAGACTCACTGATGTTGTCAAGAGTTCCACAAAAGAGAAGGTTGTCCGAGTTGTTATTTTGACCTTGAGGAACTTACTCCACAAGGGAACATTTGGAGCTCAAATGGTCGGTCTCGGACTACCACAAATTGTTCAAAGTTTGAAATCACAAGCATGGAGTGATGAGGACCTTTTGGAGGCTCTGAGTCAACTGGAAGAGGGGCTGAAAGATAATATCAAGCAACTAAGTTCTTTTGACAAGTACAAGCAAGAAGTGCTTCTCGGGCATCTTGACTGGTCTCCTATGCACAAAGATGTGAATTTCTGGCGTGAAAATATTACAAGCTTCGAAGAGAACGACTTGAAGATATTGAGGGTCCTAATCACCATTCTGGACAGCTCCAGTGATCCAAGGGCTCTGGCAGTTGCTTGTTTTGATCTTTCCCAGTTCATTCAACACCATCCAGCTGGGAGAGTTATAGTGACAGACCTCAAGGCCAAGGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAGGTTACCAAATATGCCCTCCTCTGCATTCAGAGGCTCTTCCTAGGCGCCAAGTATGCCAGCTTTCTGCAGGCTTAA 1365 43.08 MEIDHAELSTEQVLTRDIPWETYMTTKLISGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRLFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDPSLASEDAYEPFLRLLWKRNWFIQEKSCKILALIVSARKTTYDGSSANGDVSNSKMKITTIDDVLDGLVKWLCAQLKNPSHPSRAVSTSINCLSTLLKEPKARSSFVQADGVKLLIPLISPASTQQSTQLLYETCLCVWLLSYYEPAIEFLATSRTLPRLTDVVKSSTKEKVVRVVILTLRNLLHKGTFGAQMVGLGLPQIVQSLKSQAWSDEDLLEALSQLEEGLKDNIKQLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDLKILRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYALLCIQRLFLGAKYASFLQA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2448677 2455583 - CmaCh14G005020.1 Cma14g00502 307485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00502 454 Gene3D - 3 333 IPR011989 -
Cma14g00502 454 Pfam V-ATPase subunit H 5 325 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cma14g00502 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 454 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cma14g00502 454 CDD VATPase_H 4 448 - -
Cma14g00502 454 SUPERFAMILY ARM repeat 10 444 IPR016024 -
Cma14g00502 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221|GO:1902600
Cma14g00502 454 SMART arm_5 404 444 IPR000225 GO:0005515
Cma14g00502 454 SMART arm_5 198 242 IPR000225 GO:0005515
Cma14g00502 454 SMART arm_5 243 284 IPR000225 GO:0005515
Cma14g00502 454 PIRSF V-ATP_synth_H 1 453 IPR004908 GO:0000221|GO:0046961|GO:1902600
Cma14g00502 454 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 400 407 IPR018506 GO:0020037
Cma14g00502 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 454 - -
Cma14g00502 454 Gene3D - 345 446 IPR038497 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00813 Cma-Chr7:3746746 Cma14g00502 Cma-Chr14:2448677 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00502 K02144 - csv:101217015 849.351