Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00506 ATGGGAAAGAGCGAGGAAGAACAGCCGCTGCCGGTTGGAGTGAGCTCCTCCGAGCTTTCTGATTGGACTGTACAGAGTAGATGTGGCGGCGGCGGGTGCTTTGCGATTCGTAGACTGATTGCTGTGAGATGTGTCTTCTTCCTGTTACTGTCGGCGGCTGTGTTTCTTTCTGCTATTTTTTGGCTGCCGCCGTTCCTTTCATACGGAGATTGGCCGGATCAGGCGGCTGATTCTACTTATAGAGATCATGAAATAGTAGCGTGTTTTCGTGCTCGGAAGCCAGTTCCTTTTCTGAAAAACCATATTTTTGAGCTTGAAGATAACATTTTTGGAGAAATTCCTGTTCCTTTTGTCAAGGTGGCTGTCCTCTCGCTACAATCATTAGGCGGATCGAACGTAACAGATATCATTTTCTCTGTAGATCCTGATGCCAAGTATTCAAAAATTCCCCCAACTTCTCAAAGTTTAATCAAGGAAACGTTTGAAACATTGGTTATAAACGATCCTCCTCTCAGATTGAACGCATCGTTATTCGGCAATACTTCGTTGTTCGAGGTGTTGAAATTTCCTGGTGGGATAACTATTATTCCTCCTCAGAGTGCATTTCTTCTGCAGACAGCACAGATCTATTTCAATTTTACGTTGAATTATTCTATATATCAAATTCAAGTGAATTTCAATGATCTTACCAGCCAGCTGAGGTCGGGATTACGTCTATCTCGTTATGAGAATTTATATGTTAGCCTATCGAACGAACGAGGTTCGACAATGCAGGCTCCTACTATTGTTCAGTCGTCTGTTCTGATGGCTATTGGGACGAATTCATCGAATCAAAGACTCAAACAGTTGGCTCAAACCATCACGAATTCTCATTCAGGAAATCTTGGCCTGAACAACACTGTTTTTGGCAAGGTCAAGCAGGTGCGTCTTTCGTCGGTTCTAAACCACTCTCTTAGTGGCGGTCAAGCACGGTCACCTTCACCTGCTCCTCTGCCTCATTCTCACCCCCACCACCCCCATCATCACCACCACCACCACCACCACCACCATCAACACCACCATCAACACCACCATCACCATCACCATCACCATCACCATCACCACCATCACCACCACCACCACCACCAACACCACCACCAGGACGCTGCATATTCACCGAGTCCTGGAACAGAGGAGCACAAACATGCACCGAAGAATGGGATCTCATCCGCTGCATATTCACCGAGTCCTGGAACAGAGGAGCACAAACATGCACCGAAGAATGGGATCTCATCCGCTCCTGAAGCTGGTTCATCCCCAGTGGAAAGTCCAGCCTCAAAGAAACGTAACTACGAAGCAACTCCACCTGGTTTTCGATATGGATATAAAGGGTTGTCAACAAAAGTCAGAAAACGATCTCATTTAGGCTCTATTCCGTCTCCAAGCAGTCCTCCATCGTCGCCATACTTGCGAGTAGGTCTGCCAGCACCGGTCACGGTTTCTATATCTGCTTCAAGTCCACTGCCAGGGGTAGCTCTATCTAATGTACAGCCTCCAGAAAAAGGCGACAGAAGTGCCCCTTCAGTCTTGCCACCACAATTTTCTTGTGTTCGTGTTCATACAATTCGATGGACACTCGCACTGTTTCTTGTTGTATGGCATAAAATGTAA 1650 46.55 MGKSEEEQPLPVGVSSSELSDWTVQSRCGGGGCFAIRRLIAVRCVFFLLLSAAVFLSAIFWLPPFLSYGDWPDQAADSTYRDHEIVACFRARKPVPFLKNHIFELEDNIFGEIPVPFVKVAVLSLQSLGGSNVTDIIFSVDPDAKYSKIPPTSQSLIKETFETLVINDPPLRLNASLFGNTSLFEVLKFPGGITIIPPQSAFLLQTAQIYFNFTLNYSIYQIQVNFNDLTSQLRSGLRLSRYENLYVSLSNERGSTMQAPTIVQSSVLMAIGTNSSNQRLKQLAQTITNSHSGNLGLNNTVFGKVKQVRLSSVLNHSLSGGQARSPSPAPLPHSHPHHPHHHHHHHHHHHQHHHQHHHHHHHHHHHHHHHHHHHHQHHHQDAAYSPSPGTEEHKHAPKNGISSAAYSPSPGTEEHKHAPKNGISSAPEAGSSPVESPASKKRNYEATPPGFRYGYKGLSTKVRKRSHLGSIPSPSSPPSSPYLRVGLPAPVTVSISASSPLPGVALSNVQPPEKGDRSAPSVLPPQFSCVRVHTIRWTLALFLVVWHKM 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2469215 2473015 - CmaCh14G005060.1 Cma14g00506 307489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00506 549 PANTHER F20B24.21 1 545 - -
Cma14g00506 549 MobiDBLite consensus disorder prediction 317 456 - -
Cma14g00506 549 MobiDBLite consensus disorder prediction 334 379 - -
Cma14g00506 549 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 545 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma07g01106 Cma14g00506 CCT
Cma03g00161 Cma14g00506 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g00517 Cma-Chr4:2628762 Cma14g00506 Cma-Chr14:2469215 2.59E-57 dispersed
Cma07g01106 Cma-Chr7:6002217 Cma14g00506 Cma-Chr14:2469215 1.17E-99 dispersed
Cma14g00506 Cma-Chr14:2469215 Cma16g00375 Cma-Chr16:1779051 1.57E-49 dispersed
Cma14g00506 Cma-Chr14:2469215 Cma03g00161 Cma-Chr3:2180558 9.31E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00506 - - cmax:111482272 972.615