Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00515 ATGGTTATGGCTGCCGATTCTCAGTTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTTCTCAAAACCTCCTCATATCAAGTTACTACGGTTGATTCAGGGAGTAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAGCATACCAACTTCAAATCTCCTTCTTCTTCTTCTTCCTCTTCCAACATTCATCATCAGGAAGTGGAAGTGAATCTTATCATTACTGATTACTGTATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCACATATAATGAAGACGAAATTCAAGGATCAAAATCAAGAAGAAGAAGAAGAAGAAGAAACAACAGAGACCGAATTCGAATCGATTGAAAAACAACAACAACAACAACAGATTCAAATGAACAGTAACAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTGGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGA 666 41.29 MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQHTNFKSPSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKFKDQNQEEEEEEETTETEFESIEKQQQQQQIQMNSNNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2564303 2566252 + CmaCh14G005150.1 Cma14g00515 307498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00515 221 CDD REC_typeA_ARR 11 146 - -
Cma14g00515 221 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
Cma14g00515 221 ProSiteProfiles Response regulatory domain profile. 10 151 IPR001789 GO:0000160
Cma14g00515 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 3 208 - -
Cma14g00515 221 MobiDBLite consensus disorder prediction 155 221 - -
Cma14g00515 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 208 IPR045279 GO:0009736
Cma14g00515 221 Coils Coil 152 179 - -
Cma14g00515 221 MobiDBLite consensus disorder prediction 175 192 - -
Cma14g00515 221 SMART REC_2 9 150 IPR001789 GO:0000160
Cma14g00515 221 Gene3D - 10 217 - -
Cma14g00515 221 MobiDBLite consensus disorder prediction 193 212 - -
Cma14g00515 221 SUPERFAMILY CheY-like 8 152 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01330 Cma-Chr4:6804061 Cma14g00515 Cma-Chr14:2564303 1.23E-68 dispersed
Cma04g02197 Cma-Chr4:15337097 Cma14g00515 Cma-Chr14:2564303 3.84E-69 dispersed
Cma07g01364 Cma-Chr7:7780371 Cma14g00515 Cma-Chr14:2564303 1.31E-77 dispersed
Cma14g00515 Cma-Chr14:2564303 Cma15g00834 Cma-Chr15:4217333 1.09E-72 dispersed
Cma04g00100 Cma-Chr4:495945 Cma14g00515 Cma-Chr14:2564303 4.83E-52 transposed
Cma14g00515 Cma-Chr14:2564303 Cma03g00130 Cma-Chr3:1360782 2.75E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36214 PF00072 Response_reg 5.50E-17 CL0304 Cma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00515 K14492 - csv:101220810 311.612