Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00536 ATGGGTGTCCTAGTTTCTCTCTTCAAGCAGAGGGGTTTTATCATTTTCTTGAATCTCTCGTTTCTATCAGTGGCGGCTTGTACTTTTTTTGCCATTCGTTTTCATTCTCCAGAATCCCATTTCCACGTTCTTAACAAAAGCTCGAGAAGAATCCATGGAAGCCCACAGGATGATTGCCGGAGTTTTCTTGGTCTAACTGATTTTGAAGCTAAGTGCTCTGTTCTTAAATCCAACAACCCTTGTAACACCCAAGGCTATATAGATTATCTTTACATTTTCTATTGTCAGTATGGAAGTTTTAGCATTCTGGGGTATACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTCTGGGTAATACTGCCTCTGAATACTTTTGTTCTTCCCTTGAGAGCTTGTCAAAAGTGTTGAATCTGTCCCCTACAATTGCCGGTGTTACTCTGCTTTCTCTTGGCAATGGGGCACCTGATGTTTTTGCTAGCCTTGTTGCCTTTATGGGGGATGGAACTAGTGATATTGGATTGAATACTGTTCTTGGTGGAGCTTCGTTTGTTACCTGTGTCGTCGTCGGAATCATAAGCATTTTGCTGCGTCGGCGACGAGTTAAGGTGAATAGGTCTGGCTTCATTAGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTCTTCATACTGCTTCATGGCCATATCAATCTATGGGGTGCCATTGGGTTTTCTTCCATGTATATTGTTTATGTTTTAGCTGTTTATGTCTCCCATGCTCAATGGTTGAGTTTTAGAAGTGATATCTGTGAGCCCCTTTTGAAAGAGCCACCAAAGGATGAGTTTGAGGATGTAAATGAATCACGGTACACCGATGATGACCACGACAACGACAACGATGATGTTAGGATTGATGTATACGATCTCTGTTTTTGTCCAAGGTTATCGCCTTCTTGTCTCGTTTTCCTTCGCATTCTTGAGATTCCTCTTTACTTGCCTAGAAGATTGACAATTCCAGCCATTGCTGAAGAAAACTGGTCTAGACCATATGCAGTTGCTTCAGTGATATTGGCTCCCCTTCTCTTATCTGTTCTATGGACCTTTCACCACCAAACCGAGACAACACAGTCGAACCTAATCATCTGCGTCGTCGCTTTGCTGCTCGGGATTAGTTTTGGGATTGTTGCATTTGCAACAACTGAGAATTCAACCCCACCAAAGAAGTGCTTGTTTCCTTGGCTAGCAGCTGGCTTCACCATGAGCTTGACATGGAGTTATATTCTAGCTCAGGAACTAGTAGGCCTATTGGTTTCACTTGGCTACATAATGAACATAAGCCCTTCAATCCTAGGACTTACCTTCCTAGCCTGGGGAAACTCTCTTGGGGATTTGGTTGCCAATGTGACCATGGCATTGAACGGCGGGCAGCGAGGCGCTCAAATCGCCATCTCCGGCTGCTATGCCGGTCCCATCTTCAACACTTTGTTCGGCCTCGGAATGTCCCTCATCGGCGCATCGTGGAAGAAGTATCCTCAGTCGATCGCCATCCCTCCCGACCCGTATGTCATGGAGACATTGGGGCTGTTAGTCGGCGGGTTGCTTTGGGCACTTGTGGCCTTGCCGAGGCGAGAAATGAGGCTTGATGCAGTCCTGGGAGGAGGCCTTTTGGCTATCTACTTGACCTCTTTGCTCTTAAGGCTGTTGCAAGCTTTCGCTTCTTCCCATTAG 1719 45.2 MGVLVSLFKQRGFIIFLNLSFLSVAACTFFAIRFHSPESHFHVLNKSSRRIHGSPQDDCRSFLGLTDFEAKCSVLKSNNPCNTQGYIDYLYIFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKVLNLSPTIAGVTLLSLGNGAPDVFASLVAFMGDGTSDIGLNTVLGGASFVTCVVVGIISILLRRRRVKVNRSGFIRDVLFFLLVLLSVFFILLHGHINLWGAIGFSSMYIVYVLAVYVSHAQWLSFRSDICEPLLKEPPKDEFEDVNESRYTDDDHDNDNDDVRIDVYDLCFCPRLSPSCLVFLRILEIPLYLPRRLTIPAIAEENWSRPYAVASVILAPLLLSVLWTFHHQTETTQSNLIICVVALLLGISFGIVAFATTENSTPPKKCLFPWLAAGFTMSLTWSYILAQELVGLLVSLGYIMNISPSILGLTFLAWGNSLGDLVANVTMALNGGQRGAQIAISGCYAGPIFNTLFGLGMSLIGASWKKYPQSIAIPPDPYVMETLGLLVGGLLWALVALPRREMRLDAVLGGGLLAIYLTSLLLRLLQAFASSH 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2658867 2660585 + CmaCh14G005360.1 Cma14g00536 307519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00536 572 PANTHER CATION/CALCIUM EXCHANGER 2 16 570 - -
Cma14g00536 572 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 16 570 - -
Cma14g00536 572 Gene3D - 140 263 IPR044880 -
Cma14g00536 572 Gene3D - 349 564 IPR044880 -
Cma14g00536 572 Pfam Sodium/calcium exchanger protein 109 253 IPR004837 GO:0016021|GO:0055085
Cma14g00536 572 Pfam Sodium/calcium exchanger protein 411 562 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00774 Cma-Chr10:3546327 Cma14g00536 Cma-Chr14:2658867 2.29E-43 dispersed
Cma11g00740 Cma-Chr11:3607174 Cma14g00536 Cma-Chr14:2658867 1.87E-47 dispersed
Cma10g01074 Cma-Chr10:6889686 Cma14g00536 Cma-Chr14:2658867 6.20E-52 transposed
Cma14g00536 Cma-Chr14:2658867 Cma06g00904 Cma-Chr6:5825641 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00536 K13754 - csv:101204766 967.607