Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00543 ATGGCTTCGTCGTCCTCTGATCCTGGCTTCAAACACGAACCAGGTTCTTGTAGTGCTGCTGCTGCTGTTGCCGGAGGAGGAACGGCGGAATCTTCGGAGGTTGTAATGGCGAATGATCAGCTTTTACTGTACAGAGGGTTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCCAAAGAGCGGATCAGTAAAATGCCTCCGTGTGCTGCTGGAAAAAGAAGTTCTATATACCGCGGAGTCACAAGCGCCATTGAATGGTTTGATGATATTAGGCATAGATGGACTGGTCGTTATGAAGCTCATCTTTGGGATAAAAGTACATGGAACCAGAACCAGAACAAAAAGGGAAAGCAAGGGGCATATGATGAAGAAGAGGCCGCTGCTAGGGCTTATGATTTGGCTGCGTTAAAATATTGGGGTCCTGGGACTCTTATTAACTTTCCAGTGACTGATTATTCAAGGGACCTTGAAGAAATGCAGAATGTTTCAAGAGAGGAATATCTTGCATCCCTAAGGAGAAAGAGCAGTGGATTCTCCAGGGGAATATCCAAATATCGAGGTCTCCCAAGTCGTTGGGATCCTTCATTTAGTCGTGTGCCGGGCCCTGAGTATATCAACAGCATAAACTATGGTGCTGGAGATGATCAAGCAACAGAAGGTGAGTTCGTCCCGGGCTTCTGCATTGAAAAGAAGATTGACTTAACAAGTCACATTAAATGGTGGGGGCCCAACAAAACTCGAACGGCAAGTGCTGGCTCAAAGTCGTCAGAAGAAGACAAACATAGTAGTTGTGCTGGAGAAGTTGGCAGTGAACTCAAAGCTCTGGGGCAGACCGCCCGTCCTACGGAGCCATATGAGATGCCTTGTTTGGGTACACTACATGATGTAAAGAAGGCTACTTCAAGGGTCTCTGCCTTAAGCATCTTGTCACGGTCAGCAGCCTACAAGAGTTTGCAGGAGAAAGCTTTGAAATTACAGGAAATTAACAATGAGAATGATGAGAATGAAAATAAAAACACTGTTAACAAGATAGATCATGGGAAAGTAATTGAAACACATACAAGTCATGGTGGTGATCCCAGCGAGAGATATGGGGTTGCTTTCGGAACAAGTGGTGGATTGCCACTTCAGAGAAATATGTTCCCCTTGACTCCTTTCTTAACTGCACCTCTTCTTAGTAGTTACAACACTGTTGATCCACTGGGAGATCCGATTCATTGGACATCTCTCGTTTCTGTTCTTCCTACTGGACTTTCTCGTACAGCTGAGTTGGAAGGATCGGAGTGGCTAGCAGCTTGCAATTTGGATGACATTGCCCTGCTGTGCCCTCAGAAGAAAAGTATGGCCGGGAATCTGCTCGGAAGGATCATTGGAGCCGCTGGCCGACCAGAGTTTTGTCATATACGAAGCGAACTAAGAAACCTCGAAACGACTGTGTCGAATCTCAAGTCCGGACTCCGAGACGCCGAGGAGAAGCAGGCAAGCGATGCGGAACTCTATGATCTGCTTAAACAACTCAAACATGCATTTTCAATGGCCGACGATCTTCTTGAGGTATTGGAATGCGATTATTTGAAGTGGAGAGTGCAGAACAGAAAGAATGACGTTGACAAAAAAGGATGCCAGTTCTTTTCTTGTTTCTCGTCCAATTTCCTCGTTTCTGCAACTAAAACTGCCGCTGAAATCAACGAAATCACAAAGACTTTAGATACGATTGAGGAAACCTTGTCTGAATTCTCTCTGGTTGAAGATGAAAATGAACATATCAAACGTCTGAAGAGTGAAATGAGTCTGCGGTCCTCCATTACTGGTTCGCAAGTTTTCTCAAGGCTTCTGCATTTGAAAAAAGAGGCGATTCTCTCTGATAATTTCGACTACATTGTTGGTAGAGATGAAGCAAAACAGAGTATCATTGATGAACTACTGAAGGATGAAGATGATGAACAAAAATCTCGGCGTATTCTTTCAATCCATGGAGATGGAGGGATGGGAAAGACGGCTCTGGCCAAGTTAGTCTACAATGACAACGAAGTGTTTGATCATTTTGACAAGAGAATGTGGATATGGGTTTCTGAAGATTTTGATGTTCGGAGAATCAGAAGGGAGGTTCTCAGTTCAGCAACCGGAGAAAAGGTTAGTGATGTCCTAAGCGACTGCCGTTTACTAATCCGGCTCAAACGGAACTTTATCGGCAGGAAATTCTTGCTTGTTTTGGATGATTTTGGGGATTTGGATTCCGGTAGAGTATCAGAACTGGAAAAATTAGTGGAGATGGGCGCTAATGGCAGCAAGATCATGATCACCACTCGCAGTGAGCAAACTGTACAGGATTCTGCAACATACAAGGTTGAAAAACTCGACGAGGAGAAATCCATGGTTTTATTTGAACAGACATTTGGAAGAAAAATCCTTACTGGAAATATGACCAGAATTCACAGTGAACTCAAGAAAGAACTTGTGCCAAAATGTGGAGGAGTTCCTTTAGCAATCAAATCCTTGGCGGGACTGCTTTCATTGGAAGCGAGTTATGGTGTCGAATGGTTGGATGTCACGGCCTTCAGTGAGAAATGGAAACAGGAAGAGGTGAAGGAGGGTGGTTGCGTTCTACATGCACTGAAACTGAGTTATGATCTAATGCCATCTTACTTAAAGCCTTGTTTTCTTTGTTTTTCGTTGTTGCCAAAAGATTATGTGTTCTACTCATTTGAGATAATCCAGTTATGGATGGCGCAAGGAATCCTTCATTCAGATAGCAAAGATCCTGAGGTTGTTGGGGAGCAATACTTCAATGAATTGTGGTCTCGTGGTTTACTCGAAGACGTTGAGGAGCACGCTCTTGGATATTGGTTCAAAATCCATAGCCTTGTTCATGATCTTGCAGTCCAACAGGCTAGTAAGGAACAACAGAACCTGGAAAGTTTGCATCAGCTGTCATTTGTCAACTGCAACAACAAGGATTTGCCCCGGCCGACATGTGATAAAATTTGTGTTCTTTCCATTCCAGTGGGAGGAGGTGTGGAGCCAAAGATCAATGGAGTTCCTCTTTTCAAATGCCTCACCAATTTCAGGCAGCTAAGGGTCTTGTACTTATGCAACTCTTCTTTGGAAGAAATTCCAACCTCCATCGACGCGCTGAAACATTTGAGGTATTTAGATTTGCGAGGGAGCCGACGACTCAAGAGGTTGCCAGAGTCTATTTGCAAGCTACAGAGCCTGCAGACCCTGATACTTGCATTCTGCTCAGAGCTTGAAGAGCTTCCCAAAGACATAGGGAACTTGATCAGCCTCAGATTCTTATGGATACAGACAAAGCAAGCCAGCTTGGGAAAAGATGGCATAGGAAGCTTAACATCGCTTCGTTTTCTCGCCATCGGAGGGAGCAAAAGCTTGACTCGCTTGTTTGATGATATTGACAGACTCAATTCCCTTCAAACACTAATCATTTATGATTGCAAATCGCTGCTAACATTGCCAAAAGGCTTGGAAAGCTTGAGTACGTTGTGTAATATGGCACTATGGGGGTGTGAGCAGCTGAAATGGACAATCTCACTGGAATTGCTTCGTTTGAAGAAACTGATACTCAGAGGACTTCCATCATTCGCCATTTTTCCGACGTGGTTAAACAGGTTTGATGCAGATTTAGAAGTGCTAGAAGTTGGAGAGTTTCCCACGCTAAGAGTATTGCCTTCCTGGCTTCCAAATTTATGGGAACTTCGAATTCTTGGGATCTCCAACTGCCCTAGATTGGAGGGTCGTATGCCTCTTTATATGGATAATTGTGATAAGATGGAGGAATTGAGGATCACATTTTGTGGGATGTTTAGCAAAAACGTTATGAATGAAAGCAATCACGAAGAGTGGGGTATCTCTCACGTCTCTACTATTTATGTCGACACCAGACGAACCAATCCACGAGTAACATCAATAGATGAACACGAGGCAGCAGGTGGAGCTGAAGTAAAGCATGGAGTAGACAATGATGAGCAGGAGAGTGATGCTCAACATGTTGGATTCAACAATGATGCTGGAGTTAGACCAAAACAAGATGGTATTGGTAGTGACATTCATGAATCAATTGGTACCCGACAGGTTAACGGAGCAGCTGAGGACGGTCGTGTTGGGGCTGGACAAACTGGACAAGGAGAACACAACCGAACTACGAACGATGATCATCTTGAAGCTAACATTGGTAGTGACATTGGGACTGGACGACCTTTAAATCCAGAACATGATAAGGCTAACAATGATAGTCATGTTGGTACTGGACAAACTGTTGGAGAGAAAGTAGATGAAGTTGGCGACGATAGGCTAGTCGGAACCGAACAAACTTTGGGTGATCCTAACGTCGGGACTAGACACATCGTAAGAGCAAAACAAGATGTAATTACTGATGAGAGTCATGCTGGGGCTAAACTTGGTGGAGCAAATGAGAATGGCGATGCTGAGGTGGACCGTGCGGGATCCGAACAAACTATGGCAGGGGCAAAGAACATTCAGAGGCAAGACATCCATAGATTGGAAGATGAAGAATATTCAGAGGCAAAGAACATTCTGTACTCTGTTCATGAAGAACAAACGCAAATCCAGTTTCAGTTGGCTTCCTTCGGTAAAGCCAAAAAGAAAAGGTATGAAAACTTTTTGCCGTTTGCTTGA 4653 44.14 MASSSSDPGFKHEPGSCSAAAAVAGGGTAESSEVVMANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTSAIEWFDDIRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDEEEAAARAYDLAALKYWGPGTLINFPVTDYSRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLPSRWDPSFSRVPGPEYINSINYGAGDDQATEGEFVPGFCIEKKIDLTSHIKWWGPNKTRTASAGSKSSEEDKHSSCAGEVGSELKALGQTARPTEPYEMPCLGTLHDVKKATSRVSALSILSRSAAYKSLQEKALKLQEINNENDENENKNTVNKIDHGKVIETHTSHGGDPSERYGVAFGTSGGLPLQRNMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAELEGSEWLAACNLDDIALLCPQKKSMAGNLLGRIIGAAGRPEFCHIRSELRNLETTVSNLKSGLRDAEEKQASDAELYDLLKQLKHAFSMADDLLEVLECDYLKWRVQNRKNDVDKKGCQFFSCFSSNFLVSATKTAAEINEITKTLDTIEETLSEFSLVEDENEHIKRLKSEMSLRSSITGSQVFSRLLHLKKEAILSDNFDYIVGRDEAKQSIIDELLKDEDDEQKSRRILSIHGDGGMGKTALAKLVYNDNEVFDHFDKRMWIWVSEDFDVRRIRREVLSSATGEKVSDVLSDCRLLIRLKRNFIGRKFLLVLDDFGDLDSGRVSELEKLVEMGANGSKIMITTRSEQTVQDSATYKVEKLDEEKSMVLFEQTFGRKILTGNMTRIHSELKKELVPKCGGVPLAIKSLAGLLSLEASYGVEWLDVTAFSEKWKQEEVKEGGCVLHALKLSYDLMPSYLKPCFLCFSLLPKDYVFYSFEIIQLWMAQGILHSDSKDPEVVGEQYFNELWSRGLLEDVEEHALGYWFKIHSLVHDLAVQQASKEQQNLESLHQLSFVNCNNKDLPRPTCDKICVLSIPVGGGVEPKINGVPLFKCLTNFRQLRVLYLCNSSLEEIPTSIDALKHLRYLDLRGSRRLKRLPESICKLQSLQTLILAFCSELEELPKDIGNLISLRFLWIQTKQASLGKDGIGSLTSLRFLAIGGSKSLTRLFDDIDRLNSLQTLIIYDCKSLLTLPKGLESLSTLCNMALWGCEQLKWTISLELLRLKKLILRGLPSFAIFPTWLNRFDADLEVLEVGEFPTLRVLPSWLPNLWELRILGISNCPRLEGRMPLYMDNCDKMEELRITFCGMFSKNVMNESNHEEWGISHVSTIYVDTRRTNPRVTSIDEHEAAGGAEVKHGVDNDEQESDAQHVGFNNDAGVRPKQDGIGSDIHESIGTRQVNGAAEDGRVGAGQTGQGEHNRTTNDDHLEANIGSDIGTGRPLNPEHDKANNDSHVGTGQTVGEKVDEVGDDRLVGTEQTLGDPNVGTRHIVRAKQDVITDESHAGAKLGGANENGDAEVDRAGSEQTMAGAKNIQRQDIHRLEDEEYSEAKNILYSVHEEQTQIQFQLASFGKAKKKRYENFLPFA 1550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2693741 2703572 + CmaCh14G005430.1 Cma14g00543 307526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00543 1550 Gene3D Ribonuclease Inhibitor 1008 1293 IPR032675 -
Cma14g00543 1550 Gene3D - 785 874 IPR042197 -
Cma14g00543 1550 Gene3D AP2/ERF domain 76 150 IPR036955 GO:0003700|GO:0006355
Cma14g00543 1550 Coils Coil 472 492 - -
Cma14g00543 1550 MobiDBLite consensus disorder prediction 246 267 - -
Cma14g00543 1550 Pfam NB-ARC domain 632 877 IPR002182 GO:0043531
Cma14g00543 1550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 889 IPR027417 -
Cma14g00543 1550 Gene3D - 613 783 IPR027417 -
Cma14g00543 1550 PANTHER BNAA03G19580D PROTEIN 24 428 - -
Cma14g00543 1550 ProSiteProfiles AP2/ERF domain profile. 76 148 IPR001471 GO:0003700|GO:0006355
Cma14g00543 1550 MobiDBLite consensus disorder prediction 1 23 - -
Cma14g00543 1550 Coils Coil 315 343 - -
Cma14g00543 1550 Pfam Leucine rich repeat 1023 1079 IPR001611 GO:0005515
Cma14g00543 1550 PRINTS Disease resistance protein signature 654 669 - -
Cma14g00543 1550 PRINTS Disease resistance protein signature 1067 1083 - -
Cma14g00543 1550 PRINTS Disease resistance protein signature 728 742 - -
Cma14g00543 1550 PRINTS Disease resistance protein signature 823 837 - -
Cma14g00543 1550 Gene3D - 875 964 IPR036388 -
Cma14g00543 1550 SMART rav1_2 76 154 IPR001471 GO:0003700|GO:0006355
Cma14g00543 1550 MobiDBLite consensus disorder prediction 252 266 - -
Cma14g00543 1550 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 24 428 - -
Cma14g00543 1550 MobiDBLite consensus disorder prediction 1363 1424 - -
Cma14g00543 1550 SUPERFAMILY DNA-binding domain 91 149 IPR016177 GO:0003677
Cma14g00543 1550 SUPERFAMILY L domain-like 947 1277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00543 Cma-Chr14:2693741 Cma14g00547 Cma-Chr14:2713123 0 dispersed
Cma14g00543 Cma-Chr14:2693741 Cma14g00544 Cma-Chr14:2703726 0 tandem
Cma14g00543 Cma-Chr14:2693741 Cma06g00898 Cma-Chr6:5727459 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36218 PF00931 NB-ARC 1.20E-33 CL0023 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00543 K09285 - cmax:111482235 2073.9