Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g00543 | ATGGCTTCGTCGTCCTCTGATCCTGGCTTCAAACACGAACCAGGTTCTTGTAGTGCTGCTGCTGCTGTTGCCGGAGGAGGAACGGCGGAATCTTCGGAGGTTGTAATGGCGAATGATCAGCTTTTACTGTACAGAGGGTTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCCAAAGAGCGGATCAGTAAAATGCCTCCGTGTGCTGCTGGAAAAAGAAGTTCTATATACCGCGGAGTCACAAGCGCCATTGAATGGTTTGATGATATTAGGCATAGATGGACTGGTCGTTATGAAGCTCATCTTTGGGATAAAAGTACATGGAACCAGAACCAGAACAAAAAGGGAAAGCAAGGGGCATATGATGAAGAAGAGGCCGCTGCTAGGGCTTATGATTTGGCTGCGTTAAAATATTGGGGTCCTGGGACTCTTATTAACTTTCCAGTGACTGATTATTCAAGGGACCTTGAAGAAATGCAGAATGTTTCAAGAGAGGAATATCTTGCATCCCTAAGGAGAAAGAGCAGTGGATTCTCCAGGGGAATATCCAAATATCGAGGTCTCCCAAGTCGTTGGGATCCTTCATTTAGTCGTGTGCCGGGCCCTGAGTATATCAACAGCATAAACTATGGTGCTGGAGATGATCAAGCAACAGAAGGTGAGTTCGTCCCGGGCTTCTGCATTGAAAAGAAGATTGACTTAACAAGTCACATTAAATGGTGGGGGCCCAACAAAACTCGAACGGCAAGTGCTGGCTCAAAGTCGTCAGAAGAAGACAAACATAGTAGTTGTGCTGGAGAAGTTGGCAGTGAACTCAAAGCTCTGGGGCAGACCGCCCGTCCTACGGAGCCATATGAGATGCCTTGTTTGGGTACACTACATGATGTAAAGAAGGCTACTTCAAGGGTCTCTGCCTTAAGCATCTTGTCACGGTCAGCAGCCTACAAGAGTTTGCAGGAGAAAGCTTTGAAATTACAGGAAATTAACAATGAGAATGATGAGAATGAAAATAAAAACACTGTTAACAAGATAGATCATGGGAAAGTAATTGAAACACATACAAGTCATGGTGGTGATCCCAGCGAGAGATATGGGGTTGCTTTCGGAACAAGTGGTGGATTGCCACTTCAGAGAAATATGTTCCCCTTGACTCCTTTCTTAACTGCACCTCTTCTTAGTAGTTACAACACTGTTGATCCACTGGGAGATCCGATTCATTGGACATCTCTCGTTTCTGTTCTTCCTACTGGACTTTCTCGTACAGCTGAGTTGGAAGGATCGGAGTGGCTAGCAGCTTGCAATTTGGATGACATTGCCCTGCTGTGCCCTCAGAAGAAAAGTATGGCCGGGAATCTGCTCGGAAGGATCATTGGAGCCGCTGGCCGACCAGAGTTTTGTCATATACGAAGCGAACTAAGAAACCTCGAAACGACTGTGTCGAATCTCAAGTCCGGACTCCGAGACGCCGAGGAGAAGCAGGCAAGCGATGCGGAACTCTATGATCTGCTTAAACAACTCAAACATGCATTTTCAATGGCCGACGATCTTCTTGAGGTATTGGAATGCGATTATTTGAAGTGGAGAGTGCAGAACAGAAAGAATGACGTTGACAAAAAAGGATGCCAGTTCTTTTCTTGTTTCTCGTCCAATTTCCTCGTTTCTGCAACTAAAACTGCCGCTGAAATCAACGAAATCACAAAGACTTTAGATACGATTGAGGAAACCTTGTCTGAATTCTCTCTGGTTGAAGATGAAAATGAACATATCAAACGTCTGAAGAGTGAAATGAGTCTGCGGTCCTCCATTACTGGTTCGCAAGTTTTCTCAAGGCTTCTGCATTTGAAAAAAGAGGCGATTCTCTCTGATAATTTCGACTACATTGTTGGTAGAGATGAAGCAAAACAGAGTATCATTGATGAACTACTGAAGGATGAAGATGATGAACAAAAATCTCGGCGTATTCTTTCAATCCATGGAGATGGAGGGATGGGAAAGACGGCTCTGGCCAAGTTAGTCTACAATGACAACGAAGTGTTTGATCATTTTGACAAGAGAATGTGGATATGGGTTTCTGAAGATTTTGATGTTCGGAGAATCAGAAGGGAGGTTCTCAGTTCAGCAACCGGAGAAAAGGTTAGTGATGTCCTAAGCGACTGCCGTTTACTAATCCGGCTCAAACGGAACTTTATCGGCAGGAAATTCTTGCTTGTTTTGGATGATTTTGGGGATTTGGATTCCGGTAGAGTATCAGAACTGGAAAAATTAGTGGAGATGGGCGCTAATGGCAGCAAGATCATGATCACCACTCGCAGTGAGCAAACTGTACAGGATTCTGCAACATACAAGGTTGAAAAACTCGACGAGGAGAAATCCATGGTTTTATTTGAACAGACATTTGGAAGAAAAATCCTTACTGGAAATATGACCAGAATTCACAGTGAACTCAAGAAAGAACTTGTGCCAAAATGTGGAGGAGTTCCTTTAGCAATCAAATCCTTGGCGGGACTGCTTTCATTGGAAGCGAGTTATGGTGTCGAATGGTTGGATGTCACGGCCTTCAGTGAGAAATGGAAACAGGAAGAGGTGAAGGAGGGTGGTTGCGTTCTACATGCACTGAAACTGAGTTATGATCTAATGCCATCTTACTTAAAGCCTTGTTTTCTTTGTTTTTCGTTGTTGCCAAAAGATTATGTGTTCTACTCATTTGAGATAATCCAGTTATGGATGGCGCAAGGAATCCTTCATTCAGATAGCAAAGATCCTGAGGTTGTTGGGGAGCAATACTTCAATGAATTGTGGTCTCGTGGTTTACTCGAAGACGTTGAGGAGCACGCTCTTGGATATTGGTTCAAAATCCATAGCCTTGTTCATGATCTTGCAGTCCAACAGGCTAGTAAGGAACAACAGAACCTGGAAAGTTTGCATCAGCTGTCATTTGTCAACTGCAACAACAAGGATTTGCCCCGGCCGACATGTGATAAAATTTGTGTTCTTTCCATTCCAGTGGGAGGAGGTGTGGAGCCAAAGATCAATGGAGTTCCTCTTTTCAAATGCCTCACCAATTTCAGGCAGCTAAGGGTCTTGTACTTATGCAACTCTTCTTTGGAAGAAATTCCAACCTCCATCGACGCGCTGAAACATTTGAGGTATTTAGATTTGCGAGGGAGCCGACGACTCAAGAGGTTGCCAGAGTCTATTTGCAAGCTACAGAGCCTGCAGACCCTGATACTTGCATTCTGCTCAGAGCTTGAAGAGCTTCCCAAAGACATAGGGAACTTGATCAGCCTCAGATTCTTATGGATACAGACAAAGCAAGCCAGCTTGGGAAAAGATGGCATAGGAAGCTTAACATCGCTTCGTTTTCTCGCCATCGGAGGGAGCAAAAGCTTGACTCGCTTGTTTGATGATATTGACAGACTCAATTCCCTTCAAACACTAATCATTTATGATTGCAAATCGCTGCTAACATTGCCAAAAGGCTTGGAAAGCTTGAGTACGTTGTGTAATATGGCACTATGGGGGTGTGAGCAGCTGAAATGGACAATCTCACTGGAATTGCTTCGTTTGAAGAAACTGATACTCAGAGGACTTCCATCATTCGCCATTTTTCCGACGTGGTTAAACAGGTTTGATGCAGATTTAGAAGTGCTAGAAGTTGGAGAGTTTCCCACGCTAAGAGTATTGCCTTCCTGGCTTCCAAATTTATGGGAACTTCGAATTCTTGGGATCTCCAACTGCCCTAGATTGGAGGGTCGTATGCCTCTTTATATGGATAATTGTGATAAGATGGAGGAATTGAGGATCACATTTTGTGGGATGTTTAGCAAAAACGTTATGAATGAAAGCAATCACGAAGAGTGGGGTATCTCTCACGTCTCTACTATTTATGTCGACACCAGACGAACCAATCCACGAGTAACATCAATAGATGAACACGAGGCAGCAGGTGGAGCTGAAGTAAAGCATGGAGTAGACAATGATGAGCAGGAGAGTGATGCTCAACATGTTGGATTCAACAATGATGCTGGAGTTAGACCAAAACAAGATGGTATTGGTAGTGACATTCATGAATCAATTGGTACCCGACAGGTTAACGGAGCAGCTGAGGACGGTCGTGTTGGGGCTGGACAAACTGGACAAGGAGAACACAACCGAACTACGAACGATGATCATCTTGAAGCTAACATTGGTAGTGACATTGGGACTGGACGACCTTTAAATCCAGAACATGATAAGGCTAACAATGATAGTCATGTTGGTACTGGACAAACTGTTGGAGAGAAAGTAGATGAAGTTGGCGACGATAGGCTAGTCGGAACCGAACAAACTTTGGGTGATCCTAACGTCGGGACTAGACACATCGTAAGAGCAAAACAAGATGTAATTACTGATGAGAGTCATGCTGGGGCTAAACTTGGTGGAGCAAATGAGAATGGCGATGCTGAGGTGGACCGTGCGGGATCCGAACAAACTATGGCAGGGGCAAAGAACATTCAGAGGCAAGACATCCATAGATTGGAAGATGAAGAATATTCAGAGGCAAAGAACATTCTGTACTCTGTTCATGAAGAACAAACGCAAATCCAGTTTCAGTTGGCTTCCTTCGGTAAAGCCAAAAAGAAAAGGTATGAAAACTTTTTGCCGTTTGCTTGA | 4653 | 44.14 | MASSSSDPGFKHEPGSCSAAAAVAGGGTAESSEVVMANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTSAIEWFDDIRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDEEEAAARAYDLAALKYWGPGTLINFPVTDYSRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLPSRWDPSFSRVPGPEYINSINYGAGDDQATEGEFVPGFCIEKKIDLTSHIKWWGPNKTRTASAGSKSSEEDKHSSCAGEVGSELKALGQTARPTEPYEMPCLGTLHDVKKATSRVSALSILSRSAAYKSLQEKALKLQEINNENDENENKNTVNKIDHGKVIETHTSHGGDPSERYGVAFGTSGGLPLQRNMFPLTPFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRTAELEGSEWLAACNLDDIALLCPQKKSMAGNLLGRIIGAAGRPEFCHIRSELRNLETTVSNLKSGLRDAEEKQASDAELYDLLKQLKHAFSMADDLLEVLECDYLKWRVQNRKNDVDKKGCQFFSCFSSNFLVSATKTAAEINEITKTLDTIEETLSEFSLVEDENEHIKRLKSEMSLRSSITGSQVFSRLLHLKKEAILSDNFDYIVGRDEAKQSIIDELLKDEDDEQKSRRILSIHGDGGMGKTALAKLVYNDNEVFDHFDKRMWIWVSEDFDVRRIRREVLSSATGEKVSDVLSDCRLLIRLKRNFIGRKFLLVLDDFGDLDSGRVSELEKLVEMGANGSKIMITTRSEQTVQDSATYKVEKLDEEKSMVLFEQTFGRKILTGNMTRIHSELKKELVPKCGGVPLAIKSLAGLLSLEASYGVEWLDVTAFSEKWKQEEVKEGGCVLHALKLSYDLMPSYLKPCFLCFSLLPKDYVFYSFEIIQLWMAQGILHSDSKDPEVVGEQYFNELWSRGLLEDVEEHALGYWFKIHSLVHDLAVQQASKEQQNLESLHQLSFVNCNNKDLPRPTCDKICVLSIPVGGGVEPKINGVPLFKCLTNFRQLRVLYLCNSSLEEIPTSIDALKHLRYLDLRGSRRLKRLPESICKLQSLQTLILAFCSELEELPKDIGNLISLRFLWIQTKQASLGKDGIGSLTSLRFLAIGGSKSLTRLFDDIDRLNSLQTLIIYDCKSLLTLPKGLESLSTLCNMALWGCEQLKWTISLELLRLKKLILRGLPSFAIFPTWLNRFDADLEVLEVGEFPTLRVLPSWLPNLWELRILGISNCPRLEGRMPLYMDNCDKMEELRITFCGMFSKNVMNESNHEEWGISHVSTIYVDTRRTNPRVTSIDEHEAAGGAEVKHGVDNDEQESDAQHVGFNNDAGVRPKQDGIGSDIHESIGTRQVNGAAEDGRVGAGQTGQGEHNRTTNDDHLEANIGSDIGTGRPLNPEHDKANNDSHVGTGQTVGEKVDEVGDDRLVGTEQTLGDPNVGTRHIVRAKQDVITDESHAGAKLGGANENGDAEVDRAGSEQTMAGAKNIQRQDIHRLEDEEYSEAKNILYSVHEEQTQIQFQLASFGKAKKKRYENFLPFA | 1550 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2693741 | 2703572 | + | CmaCh14G005430.1 | Cma14g00543 | 307526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g00543 | 1550 | Gene3D | Ribonuclease Inhibitor | 1008 | 1293 | IPR032675 | - | |
Cma14g00543 | 1550 | Gene3D | - | 785 | 874 | IPR042197 | - | |
Cma14g00543 | 1550 | Gene3D | AP2/ERF domain | 76 | 150 | IPR036955 | GO:0003700|GO:0006355 | |
Cma14g00543 | 1550 | Coils | Coil | 472 | 492 | - | - | |
Cma14g00543 | 1550 | MobiDBLite | consensus disorder prediction | 246 | 267 | - | - | |
Cma14g00543 | 1550 | Pfam | NB-ARC domain | 632 | 877 | IPR002182 | GO:0043531 | |
Cma14g00543 | 1550 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 617 | 889 | IPR027417 | - | |
Cma14g00543 | 1550 | Gene3D | - | 613 | 783 | IPR027417 | - | |
Cma14g00543 | 1550 | PANTHER | BNAA03G19580D PROTEIN | 24 | 428 | - | - | |
Cma14g00543 | 1550 | ProSiteProfiles | AP2/ERF domain profile. | 76 | 148 | IPR001471 | GO:0003700|GO:0006355 | |
Cma14g00543 | 1550 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cma14g00543 | 1550 | Coils | Coil | 315 | 343 | - | - | |
Cma14g00543 | 1550 | Pfam | Leucine rich repeat | 1023 | 1079 | IPR001611 | GO:0005515 | |
Cma14g00543 | 1550 | PRINTS | Disease resistance protein signature | 654 | 669 | - | - | |
Cma14g00543 | 1550 | PRINTS | Disease resistance protein signature | 1067 | 1083 | - | - | |
Cma14g00543 | 1550 | PRINTS | Disease resistance protein signature | 728 | 742 | - | - | |
Cma14g00543 | 1550 | PRINTS | Disease resistance protein signature | 823 | 837 | - | - | |
Cma14g00543 | 1550 | Gene3D | - | 875 | 964 | IPR036388 | - | |
Cma14g00543 | 1550 | SMART | rav1_2 | 76 | 154 | IPR001471 | GO:0003700|GO:0006355 | |
Cma14g00543 | 1550 | MobiDBLite | consensus disorder prediction | 252 | 266 | - | - | |
Cma14g00543 | 1550 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 24 | 428 | - | - | |
Cma14g00543 | 1550 | MobiDBLite | consensus disorder prediction | 1363 | 1424 | - | - | |
Cma14g00543 | 1550 | SUPERFAMILY | DNA-binding domain | 91 | 149 | IPR016177 | GO:0003677 | |
Cma14g00543 | 1550 | SUPERFAMILY | L domain-like | 947 | 1277 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma14g00543 | Cma-Chr14:2693741 | Cma14g00547 | Cma-Chr14:2713123 | 0 | dispersed | |
Cma14g00543 | Cma-Chr14:2693741 | Cma14g00544 | Cma-Chr14:2703726 | 0 | tandem | |
Cma14g00543 | Cma-Chr14:2693741 | Cma06g00898 | Cma-Chr6:5727459 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
36218 | PF00931 | NB-ARC | 1.20E-33 | CL0023 | Cma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g00543 | K09285 | - | cmax:111482235 | 2073.9 |