Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00570 ATGGGGATTAAATTTTCCAAGCAAGGTCAGGGGAAGGTTGAAAACCTTAGTTTGCAACACCACCTGATGAATTATCTATCCAAAAAATTTTACATCCGTAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTTGCTGGCTATGATCTTGACATGTCATACATTACAGATCATATTCTGGCAATGTCATTCCCTGCGGAACGGATGCGTGCTATGTATCGTAATCCCCTATGGCAGGTTAAGTCCGTATTGGACATGAGGCATCAAGGACATTACAAGGCTGGGAAAGGTCGAACCGGATTAATGGTATGTGCATACTTGGTTTACTGTGGCATGTCAGTGGAGGATGCACTTCACCTGTATGCTCAGAGGCGGACGACCAATAATGAAGGAGTATCAATTCCAAGCCAACGGCGGTATGTTGGCTACTGGGCAAAGTGCCTTTCCTTTCCAAAGGGGGTTTATAATGGATCTCCTGAGGTGAAGTTGCCCATACCCTGTAGGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTGGTCTCAGAATTGCAGGAGGTTCCTTCTCAGCTATACCGTCCATCTATGGAACGTACTCGGAGTTGTTGCAGACAATTTAAGAGTGGCTATGAGAGCAGTAACAGTCCTCGTTATTTTTTATCTTTTGTTGAAGGCGAAAATGAAGAGAACAAGTCAGAAGTAGAGCCCCATTTTATTGTTCAAATGGATACAGAGTGTTCAGCACTATACCACAAAACCTGCCTTGACTACAATTTTGAGAAGCCTTTACCTCTAACTGGAGATGTGCGCATCATATTCTACGCAAAGATGTTTGGAGGGCGTCTGTTCTATGCTTGCTTCAACTCAGCTTTCATTAAAAACAGCTTGATACAGCTAAGGTTGCAGGATTTGGACAAAGTTGGGAAAAAGGGAAGGTCGATTTGTGGTCCATCCTTCTGCTTGGAGTTGCCCTTCCTATCTGATAGAAAAGGATCCCATGATCCTGAACCGATCTTACCTGGGATTGCAAATCCCAATTGCGACGATATCACCGCTGCCGCCGCCGTCGCCGTGGAGTGCCTGCCAGATTTGAGAGGTCAACCTGTTCACAGGCGACAACATTTGGAGAAGCAGGATGAGCTTCTTATGGATGCTTATAGATCAATGTCACATGAACTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTCTATGAAATAATGTCTGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCATGATAGTTGTAGCGGCGAAAGGAATGCGTTAGCATCTATTACTGATAGTAAATTGGACTAG 1356 43.88 MGIKFSKQGQGKVENLSLQHHLMNYLSKKFYIRNLVSKQRRRMLVAGYDLDMSYITDHILAMSFPAERMRAMYRNPLWQVKSVLDMRHQGHYKAGKGRTGLMVCAYLVYCGMSVEDALHLYAQRRTTNNEGVSIPSQRRYVGYWAKCLSFPKGVYNGSPEVKLPIPCRRELQRIRLYDTVNTESIFFVVSELQEVPSQLYRPSMERTRSCCRQFKSGYESSNSPRYFLSFVEGENEENKSEVEPHFIVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNSAFIKNSLIQLRLQDLDKVGKKGRSICGPSFCLELPFLSDRKGSHDPEPILPGIANPNCDDITAAAAVAVECLPDLRGQPVHRRQHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGHDSCSGERNALASITDSKLD 451
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 2850326 2858107 - CmaCh14G005700.1 Cma14g00570 307553
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00570 451 Gene3D - 216 336 - -
Cma14g00570 451 PANTHER BNAC03G16750D PROTEIN 94 334 - -
Cma14g00570 451 ProSiteProfiles C2 tensin-type domain profile. 182 336 IPR014020 -
Cma14g00570 451 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 233 333 IPR035892 -
Cma14g00570 451 PANTHER BNAC03G16750D PROTEIN 1 93 - -
Cma14g00570 451 ProSiteProfiles Phosphatase tensin-type domain profile. 41 151 IPR029023 -
Cma14g00570 451 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 94 334 - -
Cma14g00570 451 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 93 - -
Cma14g00570 451 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 49 146 IPR029021 -
Cma14g00570 451 SMART PTEN_C2_2 164 335 IPR014020 -
Cma14g00570 451 MobiDBLite consensus disorder prediction 426 451 - -
Cma14g00570 451 Pfam C2 domain of PTEN tumour-suppressor protein 259 333 IPR014020 -
Cma14g00570 451 Gene3D Protein tyrosine phosphatase superfamily 28 92 IPR029021 -
Cma14g00570 451 Gene3D Protein tyrosine phosphatase superfamily 93 150 IPR029021 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01149 Cma-Chr11:6608799 Cma14g00570 Cma-Chr14:2850326 1.03E-52 dispersed
Cma11g01150 Cma-Chr11:6614904 Cma14g00570 Cma-Chr14:2850326 5.50E-18 dispersed
Cma14g00570 Cma-Chr14:2850326 Cma19g00587 Cma-Chr19:6516097 2.08E-06 transposed
Cma14g00570 Cma-Chr14:2850326 Cma11g01730 Cma-Chr11:11504002 4.73E-07 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00570 K01110 - csv:101212127 456.062