Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00591 ATGGCCACTGGTAATTGGAGCGCCGCCCATGAAGAAGCCTTCATCTCCGTCGGAACCGATTACTCCGATCCCCACCAATCCTTCTTCCGCGACCGATTTCAACAACTCTGCCCTCCCGAGTTCTCAAGAAAGCTTGTGGCGGAGGTGATTGCGACGTATTTGCTTGTGTTTGTCACTTGTGGGGCGGCGGCATTGAGTGTGAGTGATGAGCGACAAGTGTCGAAGCTTGGAGCGTCGATGACCGGTGGGCTCATTGTGACGGTGATGATTTACGCCGTTGGACATATCTCCGGCGCCCATATGAACCCCGCTGTCACCTTTGCTTTTGCCGCTGTGAAGCGATTTCCTTGGAAACAGGTTCCATTGTATGCAGCAGCTCAATTAAGTGGAGCTACATCGGCAGCCTTTACACTACGCATATTATTGGACCCAATTAAAGAACTCGGGACTACTTCGCCTTCTGGACCCGAGTTTAAAGCACTTATTGTGGAGATTGTTGTCTCCTTCTGTATGATGTTCGTCACTTCCGCAGTCGCTACCGACACAAAAGCTATAGGAGAGCTTGCAGGTATAGCAGTAGGCTCATCTGTATGCATCACGTCCATCTTTGCCGGGCCTATATCCGGTGGGTCCATGAACCCCGCGAGATCAATAGGACCCGCCATTGCAAGTTCACATTATGAAGGGATATGGGTGTACCTAGTCGGGCCAGTTGCAGGAACATTATTGGGGGCATGGTCATATAATTTCATACGAACAAGTGAAAAACATGGGCATCAGCTTTCTCTACAATGA 795 50.19 MATGNWSAAHEEAFISVGTDYSDPHQSFFRDRFQQLCPPEFSRKLVAEVIATYLLVFVTCGAAALSVSDERQVSKLGASMTGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVKRFPWKQVPLYAAAQLSGATSAAFTLRILLDPIKELGTTSPSGPEFKALIVEIVVSFCMMFVTSAVATDTKAIGELAGIAVGSSVCITSIFAGPISGGSMNPARSIGPAIASSHYEGIWVYLVGPVAGTLLGAWSYNFIRTSEKHGHQLSLQ 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2933065 2935849 + CmaCh14G005910.1 Cma14g00591 307574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00591 264 SUPERFAMILY Aquaporin-like 35 254 IPR023271 -
Cma14g00591 264 ProSitePatterns MIP family signature. 100 108 IPR022357 -
Cma14g00591 264 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 31 262 - -
Cma14g00591 264 CDD MIP 43 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00591 264 Pfam Major intrinsic protein 40 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00591 264 PANTHER AQUAPORIN NIP2-1 31 262 IPR034294 -
Cma14g00591 264 Gene3D Glycerol uptake facilitator protein. 18 261 IPR023271 -
Cma14g00591 264 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00591 264 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00591 264 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00591 264 PRINTS Major intrinsic protein family signature 163 181 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00591 264 PRINTS Major intrinsic protein family signature 194 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cma14g00591 264 PRINTS Major intrinsic protein family signature 231 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g01024 Cma-Chr11:5571213 Cma14g00591 Cma-Chr14:2933065 1.03E-129 dispersed
Cma11g01025 Cma-Chr11:5589421 Cma14g00591 Cma-Chr14:2933065 1.22E-157 dispersed
Cma14g00591 Cma-Chr14:2933065 Cma01g00179 Cma-Chr1:791522 1.20E-62 dispersed
Cma14g00590 Cma-Chr14:2925480 Cma14g00591 Cma-Chr14:2933065 8.19E-135 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00591 K09874 - csv:101205456 408.297