Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g00591 | ATGGCCACTGGTAATTGGAGCGCCGCCCATGAAGAAGCCTTCATCTCCGTCGGAACCGATTACTCCGATCCCCACCAATCCTTCTTCCGCGACCGATTTCAACAACTCTGCCCTCCCGAGTTCTCAAGAAAGCTTGTGGCGGAGGTGATTGCGACGTATTTGCTTGTGTTTGTCACTTGTGGGGCGGCGGCATTGAGTGTGAGTGATGAGCGACAAGTGTCGAAGCTTGGAGCGTCGATGACCGGTGGGCTCATTGTGACGGTGATGATTTACGCCGTTGGACATATCTCCGGCGCCCATATGAACCCCGCTGTCACCTTTGCTTTTGCCGCTGTGAAGCGATTTCCTTGGAAACAGGTTCCATTGTATGCAGCAGCTCAATTAAGTGGAGCTACATCGGCAGCCTTTACACTACGCATATTATTGGACCCAATTAAAGAACTCGGGACTACTTCGCCTTCTGGACCCGAGTTTAAAGCACTTATTGTGGAGATTGTTGTCTCCTTCTGTATGATGTTCGTCACTTCCGCAGTCGCTACCGACACAAAAGCTATAGGAGAGCTTGCAGGTATAGCAGTAGGCTCATCTGTATGCATCACGTCCATCTTTGCCGGGCCTATATCCGGTGGGTCCATGAACCCCGCGAGATCAATAGGACCCGCCATTGCAAGTTCACATTATGAAGGGATATGGGTGTACCTAGTCGGGCCAGTTGCAGGAACATTATTGGGGGCATGGTCATATAATTTCATACGAACAAGTGAAAAACATGGGCATCAGCTTTCTCTACAATGA | 795 | 50.19 | MATGNWSAAHEEAFISVGTDYSDPHQSFFRDRFQQLCPPEFSRKLVAEVIATYLLVFVTCGAAALSVSDERQVSKLGASMTGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVKRFPWKQVPLYAAAQLSGATSAAFTLRILLDPIKELGTTSPSGPEFKALIVEIVVSFCMMFVTSAVATDTKAIGELAGIAVGSSVCITSIFAGPISGGSMNPARSIGPAIASSHYEGIWVYLVGPVAGTLLGAWSYNFIRTSEKHGHQLSLQ | 264 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2933065 | 2935849 | + | CmaCh14G005910.1 | Cma14g00591 | 307574 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g00591 | 264 | SUPERFAMILY | Aquaporin-like | 35 | 254 | IPR023271 | - | |
Cma14g00591 | 264 | ProSitePatterns | MIP family signature. | 100 | 108 | IPR022357 | - | |
Cma14g00591 | 264 | PANTHER | MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED | 31 | 262 | - | - | |
Cma14g00591 | 264 | CDD | MIP | 43 | 251 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00591 | 264 | Pfam | Major intrinsic protein | 40 | 248 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00591 | 264 | PANTHER | AQUAPORIN NIP2-1 | 31 | 262 | IPR034294 | - | |
Cma14g00591 | 264 | Gene3D | Glycerol uptake facilitator protein. | 18 | 261 | IPR023271 | - | |
Cma14g00591 | 264 | PRINTS | Major intrinsic protein family signature | 43 | 62 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00591 | 264 | PRINTS | Major intrinsic protein family signature | 82 | 106 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00591 | 264 | PRINTS | Major intrinsic protein family signature | 119 | 138 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00591 | 264 | PRINTS | Major intrinsic protein family signature | 163 | 181 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00591 | 264 | PRINTS | Major intrinsic protein family signature | 194 | 216 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cma14g00591 | 264 | PRINTS | Major intrinsic protein family signature | 231 | 251 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma11g01024 | Cma-Chr11:5571213 | Cma14g00591 | Cma-Chr14:2933065 | 1.03E-129 | dispersed | |
Cma11g01025 | Cma-Chr11:5589421 | Cma14g00591 | Cma-Chr14:2933065 | 1.22E-157 | dispersed | |
Cma14g00591 | Cma-Chr14:2933065 | Cma01g00179 | Cma-Chr1:791522 | 1.20E-62 | dispersed | |
Cma14g00590 | Cma-Chr14:2925480 | Cma14g00591 | Cma-Chr14:2933065 | 8.19E-135 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g00591 | K09874 | - | csv:101205456 | 408.297 |