Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00628 ATGGCCGCCGCTGGAGGAACAGAGGCTTTCCCTGATCTTGGCCGCCACTGCCAGCACTCCGATTGCCATCAGCTCGATTTCCTTCCTTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTCAAATCCCACGACTGCCCGAAATCCGATTGGAACAGTAGAAAAGTTGTGGTCTGCGAAATCTGCTCCATGTCGATCGAGACCACCAGGAAGGACGGCGGTGACGAGAGCAGGATTTTGGAGAGGCATCATGAATCAGGAGATTGCGATCCAAGAAAGAAGAAAAAACCCACTTGTTCAGCGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACCTGTGTGTGTAAAACCTGCCGTTTGAAGGTGTGTTTGAAACACCGGTTTCCGGCGGAGCATAATTGTGGACGGGTGGATACAGGGCGGTGGAATGAGAAGTTTATGGCGGCTTTGGAATTGAGGAGCGGCGGCGATTGTGGGAAAAGGGGACGTCCGACGGCGGCTAATGGGTCTTCCCCATCTGTTAAAGCTTGTTGA 552 52.72 MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDWNSRKVVVCEICSMSIETTRKDGGDESRILERHHESGDCDPRKKKKPTCSARRCREILTFSNTCVCKTCRLKVCLKHRFPAEHNCGRVDTGRWNEKFMAALELRSGGDCGKRGRPTAANGSSPSVKAC 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3110075 3110924 - CmaCh14G006280.1 Cma14g00628 307611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00628 183 SMART AN1_Zf_4 17 56 IPR000058 GO:0008270
Cma14g00628 183 SMART AN1_Zf_4 104 145 IPR000058 GO:0008270
Cma14g00628 183 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 172 - -
Cma14g00628 183 ProSiteProfiles Zinc finger AN1-type profile. 98 148 IPR000058 GO:0008270
Cma14g00628 183 Pfam AN1-like Zinc finger 104 142 IPR000058 GO:0008270
Cma14g00628 183 Pfam AN1-like Zinc finger 17 54 IPR000058 GO:0008270
Cma14g00628 183 SUPERFAMILY AN1-like Zinc finger 96 143 IPR035896 -
Cma14g00628 183 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 7 172 - -
Cma14g00628 183 Gene3D - 80 157 IPR035896 -
Cma14g00628 183 Gene3D - 2 70 IPR035896 -
Cma14g00628 183 ProSiteProfiles Zinc finger AN1-type profile. 11 59 IPR000058 GO:0008270
Cma14g00628 183 SUPERFAMILY AN1-like Zinc finger 10 57 IPR035896 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00628 Cma-Chr14:3110075 Cma03g00071 Cma-Chr3:646816 1.51E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00628 - - cmax:111482351 403.29