Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00629 ATGGAGATTCTTAAATTTTTTTTCGTTCTTCTCTCCACGGCGTTGTTTTTGTCCCTATCGGAATCGGCTCCTCTCACGGCGGATTACTACCGGAAATCCTGTCCGAGATTCAGCCAGATTATACAAGAAACCGTCACCAACAAGCAGATCACTAGTCCTTCCACTGCCGCCGGAACTCTTCGCCTCTTCTTTCATGACTGTCTTCCCAACGGCTGTGATGGCTCCGTCCTCATCTCATCCACTCCCTTCAACAAAGCCGAGCGCGATGCCGATATCAACCTCTCTCTCCCCGGCGACGCCTTTGATGTTATCGTTCGGGCTAAGACCGCTCTCGAGCTTGAATGTCCCAACACCGTCTCCTGTACTGACATCCTCGCCGTTGTCACTCGCGACCTCGTCACCATGGTCGGCGGGCCTTACTACAACGTTCTCCTTGGTCGCAGGGATAGCCGTGTGTCTAAAGCTTCGATGATTCCTGGTGCTCTGCCGAAAGCTACCTCGACTATTCCTCAGATTATTGATATTTTTAAAGCGCGGGGGTTTACCGTGCAGGAAATGGTGGCGTTAAGTGGTGCTCATACGATTGGATTCTCCCATTGCAAGGAGTTCAGCTCTCAGATCTATAATTATAGCAAGTCGTCGTCGTTTGATACGCAGTATAACCCTAGATTAGCGCAAGGGTTGCAGAAGGCTTGTTCTGGTTTTGAAAAAAATCCTACATTATCGGTTTTCAATGACATTATGACTCCGAACAAGTTTGATAACTCTTACTTCCAGAATCTTCCTAGGGGATTGGGGATCTTGAAGTCTGATCATGGGTTGTATAGTGATTGGAGGACGAGGCCATTCGTAGAGGCGTATGCGGCGGATGAGAACAAGTTCTTCAAGGATTTTGCTCGGGCGATGGAGAAGTTGAGTAATTATAAAGTTATCACGGGGAATCAAGGGGAGATTCGACATAAGTGTGATGCTATTAATTGA 981 47.91 MEILKFFFVLLSTALFLSLSESAPLTADYYRKSCPRFSQIIQETVTNKQITSPSTAAGTLRLFFHDCLPNGCDGSVLISSTPFNKAERDADINLSLPGDAFDVIVRAKTALELECPNTVSCTDILAVVTRDLVTMVGGPYYNVLLGRRDSRVSKASMIPGALPKATSTIPQIIDIFKARGFTVQEMVALSGAHTIGFSHCKEFSSQIYNYSKSSSFDTQYNPRLAQGLQKACSGFEKNPTLSVFNDIMTPNKFDNSYFQNLPRGLGILKSDHGLYSDWRTRPFVEAYAADENKFFKDFARAMEKLSNYKVITGNQGEIRHKCDAIN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3113042 3114022 - CmaCh14G006290.1 Cma14g00629 307612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00629 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PANTHER - 5 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 Gene3D - 28 326 - -
Cma14g00629 326 CDD secretory_peroxidase 25 325 IPR033905 GO:0004601|GO:0042744
Cma14g00629 326 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PANTHER PEROXIDASE 31 5 326 - -
Cma14g00629 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cma14g00629 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cma14g00629 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 Pfam Peroxidase 45 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cma14g00629 326 Gene3D Peroxidase, domain 2 163 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00148 Cma-Chr10:676861 Cma14g00629 Cma-Chr14:3113042 3.38E-130 wgd
Cma11g01064 Cma-Chr11:5836905 Cma14g00629 Cma-Chr14:3113042 0 wgd
Cma13g00904 Cma-Chr13:7246240 Cma14g00629 Cma-Chr14:3113042 4.75E-141 wgd
Cma14g00629 Cma-Chr14:3113042 Cma18g00148 Cma-Chr18:760016 7.81E-141 wgd
Cma14g00629 Cma-Chr14:3113042 Cma04g02725 Cma-Chr4:18364076 1.74E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00629 K00430 - csv:101219829 602.053