Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00663 ATGGCTTCCATTTTCATCCATGGAGTTTCCTTCTTCTTCTTCTTCTTCTTCCTGTTCTTCTCTGTTTCTCTCTCAGATCCCCGAATCTCCGAAGCCGGAAGCATCTGCGGAACCTTCAAGCCTCCGCCCAAATCCCGATTCATCCCAACCTTCATCGAAGAAATGGAAGCCATATCCGAGCTTCTCACAACTCGCAATTGGACAACTCATTTCGTCAATTCTACTCCCCCAATGTTCGCCTTATCGCAGTGCTTCAACGATCTCTCTCACAACGATTGCCTTCTCTGTTACGCCGCCAGCCGCACCGCCCTTCCTCGTTGCCTTCCCGCCGTCTCCGCCCGGATCTTCCTCGATGGATGCTTCCTCCGGTATGAAAATTACAGTTTCTACAAAGAGTCCACCGATTCCCTTAGGGATTCTGTGAATTGCACCTCGGAATTGGGGGAAATCGATGAATCTGATAAGTTAGGGTTTGGAGAGAATGTTAGGGTTGTTGTTGAGAATGTGACGAGGACGGCCATGGCGAATGGCGGATTTGGGATTGGTGAAGTTAATGGGATGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTTGAGCCAGCGGGTTGTAGGACTTGCTTGGAGAAGGCGAGGAGGAGTATTACAAGCTGCTTGCCGAGTAGGGAAGGGAGGGCTTTGAATGCTGGGTGCTATTTGAGGTATTCAACTGTGAGGTTCTACAATGATAAGGCTGAAGAACAGGATCATGATGATCAAAACGGATTTTCTGGAAGAAGAGCTGTAGCTGCCATTGTTTTAGCTTCAGTTGCCTCCTTGATCATCGCCATTTCAGCTGCTTTTGCATGCTATACAAGAATATCAAACTTAAAGAAAAAGAAGAAAAAACAATCCCTTATTCCAATTTCCTTTAGGGATTCCGATGTGAATTTCAAGTATGAAACGCTTGAAAAGGCCACTAATTACTTCAGCCCATCAAGTAAGATAGGCCAAGGTGGAGCTGGTTCTGTTTATAAAGGAACTCTTCCAAATGGGAAGATTGTTGCTGTGAAGAGGTTGGTTTTCCATACCAGGCAATGGGTTGATGAGTTCTTCAATGAGGTGAATTTGATTCGTGGAATCCAACACAAAAACCTTGTTACCCTTTTAGGCTGCAGCATTGAAGGGCCTGAAAGCCTGCTGGTCTACGAGTACGCTCCGAATCGGAGCCTCGATCAGTTCATTTTCGATAAGAAGGAGGTTCAGATTCTGAATTGGAGGCAGCGTTTCAATATTATCCTGGGAACAGCTGAGGGGCTTGCACATCTTCATGAAGGTTGTAAGATGAGAATAATCCATAGAGACATAAAGAGTAGTAATGTTCTTCTGGATGAAAATTTCAATCCAAAGATTGCTGATTTTGGTCTCGCTCGGCATTTCGCAGCCGATCACACTCATCTTAGCACCGGAATTGCCGGGACACTAGGTTATATGGCTCCTGAATATCTCGTTCGAGGACAGCTTACCGAAAAGGCAGACGTTTATAGCTTTGGAGTGCTGATACTCGAGATCGTCTGTGGTAGACGAAACAGTTCCTTCACAGAAAACTCTACCCCACTCCTCCAAACAGTTTGGGATCTGTACAAATCAGGGAGATTAAGTGAAGCCATTGACTCATGCTTGAACAAGGATTACCCTGCAAAGGAAGCCATGGATGTTCTGCAAATAGGGCTGTTATGCACACAAGCTCTAGCTTCTTTAAGACCGTCAATGGCGACCGTGGTGAAACTGCTAAGCAGTGAAGGAGAGAGGAAGGTTTCCATCCCAGAACAACCTCCGTTTTTGAATCCTTGTGGAGCCTCCAGAAGATCTTGTAGAGTTAGCAGCTTGGTTTCCAAACTTGATGTTTCTTCTTGCACATCAACAGATTCAGGTTCTTCTTCTTCTAACTTGCCTTCAAGAACTGGAGATTTGACTGAATTGAATCCAAACTAA 1968 45.58 MASIFIHGVSFFFFFFFLFFSVSLSDPRISEAGSICGTFKPPPKSRFIPTFIEEMEAISELLTTRNWTTHFVNSTPPMFALSQCFNDLSHNDCLLCYAASRTALPRCLPAVSARIFLDGCFLRYENYSFYKESTDSLRDSVNCTSELGEIDESDKLGFGENVRVVVENVTRTAMANGGFGIGEVNGMFGLAQCWGSVEPAGCRTCLEKARRSITSCLPSREGRALNAGCYLRYSTVRFYNDKAEEQDHDDQNGFSGRRAVAAIVLASVASLIIAISAAFACYTRISNLKKKKKKQSLIPISFRDSDVNFKYETLEKATNYFSPSSKIGQGGAGSVYKGTLPNGKIVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVTLLGCSIEGPESLLVYEYAPNRSLDQFIFDKKEVQILNWRQRFNIILGTAEGLAHLHEGCKMRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADHTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSGRLSEAIDSCLNKDYPAKEAMDVLQIGLLCTQALASLRPSMATVVKLLSSEGERKVSIPEQPPFLNPCGASRRSCRVSSLVSKLDVSSCTSTDSGSSSSNLPSRTGDLTELNPN 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3324305 3327543 + CmaCh14G006630.1 Cma14g00663 307646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00663 655 SMART serkin_6 321 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00663 655 ProSiteProfiles Gnk2-homologous domain profile. 29 129 IPR002902 -
Cma14g00663 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 16 625 - -
Cma14g00663 655 Pfam Protein kinase domain 324 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00663 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 16 625 - -
Cma14g00663 655 Gene3D - 145 238 IPR038408 -
Cma14g00663 655 Gene3D - 42 129 IPR038408 -
Cma14g00663 655 ProSiteProfiles Gnk2-homologous domain profile. 138 238 IPR002902 -
Cma14g00663 655 CDD STKc_IRAK 327 589 - -
Cma14g00663 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Cma14g00663 655 Pfam Salt stress response/antifungal 153 235 IPR002902 -
Cma14g00663 655 Pfam Salt stress response/antifungal 70 127 IPR002902 -
Cma14g00663 655 Gene3D Phosphorylase Kinase; domain 1 281 396 - -
Cma14g00663 655 MobiDBLite consensus disorder prediction 627 655 - -
Cma14g00663 655 SUPERFAMILY Protein kinase-like (PK-like) 296 589 IPR011009 -
Cma14g00663 655 Gene3D Transferase(Phosphotransferase) domain 1 398 601 - -
Cma14g00663 655 ProSiteProfiles Protein kinase domain profile. 321 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00032 Cma-Chr5:148546 Cma14g00663 Cma-Chr14:3324305 1.22E-164 dispersed
Cma12g00028 Cma-Chr12:105679 Cma14g00663 Cma-Chr14:3324305 1.14E-150 dispersed
Cma14g00663 Cma-Chr14:3324305 Cma03g00517 Cma-Chr3:4979115 1.10E-104 dispersed
Cma16g00381 Cma-Chr16:1820625 Cma14g00663 Cma-Chr14:3324305 2.81E-78 dispersed
Cma14g00663 Cma-Chr14:3324305 Cma18g00785 Cma-Chr18:6945003 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69062 PF00069 Pkinase 1.00E-45 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00663 - - csv:101218775 1058.9