Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00668 ATGGCGGGTCTCGAGGAACTCAAGAGAAAACTTACTCCCTTGTTTGATGCTGAAAAAGGGCTTTCTATGGATTCCCCTGTGGACCCTTCTGATTCATATACGTTTTCAGACAATGGGACTGTTAATTTGCTGAGCCGATCGTATGGGGTTTACAATTTTAATGAGCTAGGGTTACAAAAATGTACATCGTGGCTTGCCGATAATTCGGGGAGTAGTGAAAGGACATATCGATGTGCTTCCCGTGAAATGAGGATATTTGGAGCCATTGGTAGTGGGGCTAGCAGTGTTGTTCAGAGAGCTATCCACATTCCTGCTCATCGAATCATGGCATTGAAGAAGATTAATATCTTTGAAAAGGAGAAAAGGCAGCAGCTTCTTACCGAGATAAGGACACTATGCGAAGCACCCTGTTCCGAGGGCCTTGTGGAGTTTCATGGAGCATTTTATACCCCTGATTCTGGGCAAATTAGCATAGCTTTGGAGTACATGGATGGAGGGTCGTTGGCAGATGTCCTACGTTTGAAAAAATGTATACCCGAGCCTGTCCTTTCGTCTATGTTTCAGAAACTTCTTCAAGGTCTAAGTTATCTGCATGGAATGAGACATTTGGTTCACAGAGATATAAAGCCAGCCAATTTACTTGTAAATCTGAAGGGTGAAGCAAAAATTACTGATTTTGGCATAAGTGCTGGCTTGGAGAATTCAATGGCAATGTGTGCTACTTTCGTCGGAACTGTCACATACATGTCACCAGAGCGAATTCGAAACGAGAGCTATTCTTATCCAGCTGACATTTGGAGCCTTGGGCTTGCACTCTTTGAGTGTGGTACTGGTGAATTTCCATATTCAGCTACTGAAGGTCTAGTGAACCTTATGTTGCAGATTTTGGATGACCCGTCTCCATCACCATCAAAACATAAGTTTTCTCCGGAGTTTTGCACGTTTGTTGATGCTTGCTTGCAGAAAGACGCAGATGCTAGGCCAACAGCGGAGCAGCTGCTTTCACACCCATTTATCAAAAAATATGAGGATGAACAAGTAGACTTGGCAGCTTTTGTACAGAATGTGTTTGATCCAGTACAGAGGATGAAGGACTTGGCCGATATGTTGACTATTCATTATTACTTGCTCTTTGATGGACCTGATGAATTATGGCACCATACAAAGGCTTTATACCATGAAAGCTCAACTTTAAGTTTCTCAGGGAAGCAATTTTCTGGTCCAAATGATATCTTTGCCAAACTATCAGACATTCGAAGTACATTAGGGGGAGACTGGCCTCTTGAAAAACTAGTTCATGTCGTCGAGAAACTCCAATGCCGAGCTCACGGTCGGGATGGAGTTGCCGTAAGGGTGTCTGGATCCTTCATCGTTGGGAACCAATTCCTCATATGTGGAGACGGTGTACAAGTAGAGGGACTGCCAAATTTTAAAGATCTCTCCATCGACATGGCGAGTAAGAAAATGGGATCCTTCCGTGAGCAGTTCATCATCGAACCGAGTGACCTCATCGGCCGATACTTCATAGCCAAACAAGAGCTTTATATAATTCAATAG 1557 43.55 MAGLEELKRKLTPLFDAEKGLSMDSPVDPSDSYTFSDNGTVNLLSRSYGVYNFNELGLQKCTSWLADNSGSSERTYRCASREMRIFGAIGSGASSVVQRAIHIPAHRIMALKKINIFEKEKRQQLLTEIRTLCEAPCSEGLVEFHGAFYTPDSGQISIALEYMDGGSLADVLRLKKCIPEPVLSSMFQKLLQGLSYLHGMRHLVHRDIKPANLLVNLKGEAKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALFECGTGEFPYSATEGLVNLMLQILDDPSPSPSKHKFSPEFCTFVDACLQKDADARPTAEQLLSHPFIKKYEDEQVDLAAFVQNVFDPVQRMKDLADMLTIHYYLLFDGPDELWHHTKALYHESSTLSFSGKQFSGPNDIFAKLSDIRSTLGGDWPLEKLVHVVEKLQCRAHGRDGVAVRVSGSFIVGNQFLICGDGVQVEGLPNFKDLSIDMASKKMGSFREQFIIEPSDLIGRYFIAKQELYIIQ 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3361622 3366080 + CmaCh14G006680.1 Cma14g00668 307651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00668 518 Gene3D - 363 517 - -
Cma14g00668 518 ProSiteProfiles Nuclear transport factor 2 domain profile. 366 516 IPR018222 -
Cma14g00668 518 CDD PKc_MAPKK_plant_like 84 343 - -
Cma14g00668 518 SUPERFAMILY NTF2-like 364 516 IPR032710 -
Cma14g00668 518 SUPERFAMILY Protein kinase-like (PK-like) 85 371 IPR011009 -
Cma14g00668 518 Gene3D Phosphorylase Kinase; domain 1 77 158 - -
Cma14g00668 518 SMART serkin_6 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00668 518 ProSiteProfiles Protein kinase domain profile. 83 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00668 518 Gene3D Transferase(Phosphotransferase) domain 1 159 362 - -
Cma14g00668 518 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 517 - -
Cma14g00668 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Cma14g00668 518 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Cma14g00668 518 PANTHER - 2 517 - -
Cma14g00668 518 Pfam Protein kinase domain 87 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g01322 Cma-Chr12:10107708 Cma14g00668 Cma-Chr14:3361622 3.47E-74 dispersed
Cma14g00668 Cma-Chr14:3361622 Cma14g01229 Cma-Chr14:9753485 2.90E-42 dispersed
Cma14g00668 Cma-Chr14:3361622 Cma05g01373 Cma-Chr5:10326136 6.60E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69063 PF00069 Pkinase 1.30E-59 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00668 K20607 - csv:101217978 1000.35