Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00672 ATGGAGCCACTTGCTGATGGTATGAGTTCTTTACTGAAAAATCAGAACCCGACATCTGCATCAAGGATTCTTGATTCCTCTAAACCATCGAAAAATGAAGCAACTTCTTCGACTTCCTGTGTTATGTCTCAAAATTGTGCCAAGAAACCAATTCGCCATCCAAATGGTTCTTCTGTAAGTAGTAAAAAACATCCTGCCAATTTGAACCAAGATGTGCAGCTTGAAGATTTAGCTGATGTGAAAAAACATACACATGTTTCGAATGAGGGGAAATCCGAGCTTGTGAAGCCTATTATCGATGATTCTAAGGATTGTTGTTCAAATGGCTTGGAAGAATCTGGAAATCAAGTATTGAACGCATCAAAAGGAGCTGCCACACAAATAAATGACCAACAAAAGTCTCAGCCAGCTGAATTATCTTGTCCAAGTCCTCAGGCCAGCATATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCAAACACAGAAGTGAGCGAATGTGCAAGCAGCATTGACAAGTCTTGTGAAAGCGTCAACATCACAAGTTCCTATGATATTGACAAAAGCAGGAAGACGAGTGTGTACCGAGGCAGTACTGGCAGTGATATTAGTGATGAGAGCAACTCGAGTAGTTTAAGCAATGCCATGTCTAAGCCCCATCAGGCAAATGACACAAGATGGGAAGCATTACAAGTCGTGAGATCCCATGATGGGATGTTAGGATTGAACCATTTCCGGTTACTTCGAAGACTGGGATGTGGCGATATTGGCAGCGTCTATCTTTCGGAGTTAACTGGTACCAAAACTTACTTTGCCATGAAGGTTATGGATAAGGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACTGAACGTGAGATATTGCAATCTCTGGATCATCCATTCCTGCCAACTTTGTATACACATTTCGAGACAGAGAAGTTCTCTTGTTTGGTAATGGAGTTTTGCCCCGGGGGCGACTTGCACGCGCTTCGGCAGAGACAACCTGGGAAATATTTTCCTGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATCTGCACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGATGATGGACACATAATGCTATCTGATTTTGACCTCTCTCTTAGATGTGCGGTCTCCCCGACCCTTGTTAAATCATCGAACTCGGGTTTAGAAGCTAAAAGCTCAGGATACTGTGTCCAGCCTGCTTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACGCCTCGATTCTTTAGCAGACACAGGAAAGAAAAGAAGTCAAAACCAAAACCGAAAAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCAGAACCGACAAGTGCGAGATCGATGTCTTTTGTTGGTACACATGAGTACCTGGCACCTGAAATCATAAAAGGTGAAGGCCATGGCAGTGCTGTGGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTTTTGTTCGGTAGAACTCCGTTCAAGGGGGCAGGGAACCGTGCTACATTATTTAACGTGGTTGGTCAGCCATTGAGATTTCCAGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCCGAGGTTTGCTTGTAAAAGAACCACAACATCGTCTTGCTTATAGACGTGGTGCTACCGAGATCAAGCAACATCCATTCTTCCAAAGCGTGAATTGGGCACTCATCCGCTGCGCCAATCCTCCAGAGGTACCAAGAATGGATGTCATTGATTTCTCTTCAAAAATGGGGACACCACACGCCGCCGCAGCAGCAGCAGCAGCGGCGGCAGCCTGCGAAAAGATGCCGGGAGTCGACGTGAAGCCTGAAGAACGACATTTGTTTTCCACTGCTCTCCGGCGATCTTCGCCGTTTGACGACTCGGTGGCGCCGCCTAACAAGGCAAGCTATGCGATTATGGCGACCAAATCATTGCTTCTGTTCTCTCAGCAAAACTCTACGTGA 2055 45.5 MEPLADGMSSLLKNQNPTSASRILDSSKPSKNEATSSTSCVMSQNCAKKPIRHPNGSSVSSKKHPANLNQDVQLEDLADVKKHTHVSNEGKSELVKPIIDDSKDCCSNGLEESGNQVLNASKGAATQINDQQKSQPAELSCPSPQASIYSTTLYAEAKQSFSNTEVSECASSIDKSCESVNITSSYDIDKSRKTSVYRGSTGSDISDESNSSSLSNAMSKPHQANDTRWEALQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKYFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCVQPACIEPTCIMQPDCIQPACFTPRFFSRHRKEKKSKPKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRMDVIDFSSKMGTPHAAAAAAAAAAACEKMPGVDVKPEERHLFSTALRRSSPFDDSVAPPNKASYAIMATKSLLLFSQQNST 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3423555 3428541 + CmaCh14G006720.1 Cma14g00672 307655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00672 684 MobiDBLite consensus disorder prediction 1 67 - -
Cma14g00672 684 PANTHER FLIPPASE KINASE 1-RELATED 38 642 - -
Cma14g00672 684 Pfam Protein kinase domain 248 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00672 684 Pfam Protein kinase domain 482 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00672 684 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 38 642 - -
Cma14g00672 684 MobiDBLite consensus disorder prediction 9 67 - -
Cma14g00672 684 MobiDBLite consensus disorder prediction 195 225 - -
Cma14g00672 684 Gene3D Transferase(Phosphotransferase) domain 1 331 398 - -
Cma14g00672 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 368 380 IPR008271 GO:0004672|GO:0006468
Cma14g00672 684 Gene3D Phosphorylase Kinase; domain 1 245 330 - -
Cma14g00672 684 SUPERFAMILY Protein kinase-like (PK-like) 221 607 IPR011009 -
Cma14g00672 684 CDD STKc_phototropin_like 246 608 - -
Cma14g00672 684 MobiDBLite consensus disorder prediction 195 223 - -
Cma14g00672 684 ProSiteProfiles Protein kinase domain profile. 247 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00672 684 SMART serkin_6 247 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00672 684 Gene3D Transferase(Phosphotransferase) domain 1 480 603 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma13g00321 Cma-Chr13:3713637 Cma14g00672 Cma-Chr14:3423555 0 dispersed
Cma14g00672 Cma-Chr14:3423555 Cma18g00622 Cma-Chr18:5507489 0 dispersed
Cma11g01457 Cma-Chr11:9603199 Cma14g00672 Cma-Chr14:3423555 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69064 PF00069 Pkinase 9.60E-36 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00672 K08286 - csv:101219962 1100.12