Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g00675 | ATGGGTTCTGATAATAGGTTCTATTCCACTGATGAATTCTATTTGGATGCCAAATGGTTGATTGATCCTAGACATCTTTTTGTTGGGCCGAAGATTGGGGAAGGTGCCCATGCTAAGGTGTATGAGGGAAAATACAAAACTCAGATTGTAGCTATCAAAATAGTGGGCAAAGGAGATACTCCTGAGAGGATGGTCAGAAGAGCAGCTCGGTTTGCCAGAGAGGTAGCAATGTTGTCCAAAGTGCAGCACAAGAACTTAGTGAAGGCAATGATCAATTCTACTTTTGGAACTTTTGCTTCTTTTTATCACTTTATTGGCGCTTGCAAGGAACCTGTGATGGTTATAGTGACTGAATTGCTCACAGGCGGCACATTGCGTAAATATCTATTGAATTTGAGGCCAATGAGCATGAAACTTAATGTGGCGATTGGGTTTGCGCTTGATATTGCTCGTGCAATGGAGTGTTTACACTCACATGGAATTATTCACCGTGACCTTAAACCAGAAAACTTGATATTGAGTGCAGATCATAAAACAGTTAAGCTTGCTGATTTTGGTTTGGCAAGAGAAGAATCGGTAACAGAGATGATGACTGCAGAAACAGGAACATATAGATGGATGGCTCCAGAGCTCTATAGCACAGTCACTTTAAAACATGGAGATAAAAAGCATTATAATCATAAAGTTGATGTATACAGCTTTGCCATTGTCTTGTGGGAGCTCATCCTTAACAGGTTGCCTTTCGAAGGCATGTCGAATTTACAGGCAGCATATGCAGCGGCTTTTAAGAACATGAGGCCCAGTGCTGAAAACCTTCCAGAGGACTTAGCTTTATTAGTGACATCATGTTGGAGAGAGGATCCAAATACAAGGCCAAACTTTAGCCAGATTATACAGATGCTATTGCAGTCCCTGGCTAGAATATCACCTCGAGAACCCGTAATCCCGCCTCGGATATGTGCTTCTGAAAATGTCATGATGCCACCTGAATCTCCCGGTACAGATTCCTTGATGGCTGTCCGACATGGCTCAGGGGAAGCCTCACACGGCATGATAGAAGAAACCCCTAAAAGCTCCTTCTTCTGCTTTAACAAGTGTTACTGA | 1104 | 42.66 | MGSDNRFYSTDEFYLDAKWLIDPRHLFVGPKIGEGAHAKVYEGKYKTQIVAIKIVGKGDTPERMVRRAARFAREVAMLSKVQHKNLVKAMINSTFGTFASFYHFIGACKEPVMVIVTELLTGGTLRKYLLNLRPMSMKLNVAIGFALDIARAMECLHSHGIIHRDLKPENLILSADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDVYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKNMRPSAENLPEDLALLVTSCWREDPNTRPNFSQIIQMLLQSLARISPREPVIPPRICASENVMMPPESPGTDSLMAVRHGSGEASHGMIEETPKSSFFCFNKCY | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 3434476 | 3437564 | + | CmaCh14G006750.1 | Cma14g00675 | 307658 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g00675 | 367 | Pfam | Protein tyrosine and serine/threonine kinase | 29 | 301 | IPR001245 | GO:0004672|GO:0006468 | |
Cma14g00675 | 367 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 326 | IPR011009 | - | |
Cma14g00675 | 367 | CDD | STKc_MAP3K-like | 32 | 301 | - | - | |
Cma14g00675 | 367 | ProSitePatterns | Protein kinases ATP-binding region signature. | 32 | 57 | IPR017441 | GO:0005524 | |
Cma14g00675 | 367 | SMART | serkin_6 | 26 | 305 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g00675 | 367 | PANTHER | PROTEIN KINASE ATN1 | 1 | 344 | - | - | |
Cma14g00675 | 367 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 161 | 173 | IPR008271 | GO:0004672|GO:0006468 | |
Cma14g00675 | 367 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 1 | 344 | - | - | |
Cma14g00675 | 367 | PRINTS | Tyrosine kinase catalytic domain signature | 117 | 130 | IPR001245 | GO:0004672|GO:0006468 | |
Cma14g00675 | 367 | PRINTS | Tyrosine kinase catalytic domain signature | 229 | 251 | IPR001245 | GO:0004672|GO:0006468 | |
Cma14g00675 | 367 | PRINTS | Tyrosine kinase catalytic domain signature | 272 | 294 | IPR001245 | GO:0004672|GO:0006468 | |
Cma14g00675 | 367 | PRINTS | Tyrosine kinase catalytic domain signature | 155 | 173 | IPR001245 | GO:0004672|GO:0006468 | |
Cma14g00675 | 367 | ProSiteProfiles | Protein kinase domain profile. | 26 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g00675 | 367 | Gene3D | Transferase(Phosphotransferase) domain 1 | 21 | 312 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma04g02680 | Cma14g00675 | CCT | |
Cma04g02680 | Cma14g00675 | ECH | |
Cma11g01458 | Cma14g00675 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma14g00018 | Cma-Chr14:75726 | Cma14g00675 | Cma-Chr14:3434476 | 4.96E-140 | dispersed | |
Cma14g00675 | Cma-Chr14:3434476 | Cma12g00938 | Cma-Chr12:7297489 | 3.41E-72 | dispersed | |
Cma10g00092 | Cma-Chr10:373193 | Cma14g00675 | Cma-Chr14:3434476 | 0 | wgd | |
Cma11g01458 | Cma-Chr11:9621175 | Cma14g00675 | Cma-Chr14:3434476 | 0 | wgd | |
Cma11g00066 | Cma-Chr11:334910 | Cma14g00675 | Cma-Chr14:3434476 | 7.40E-125 | wgd | |
Cma14g00675 | Cma-Chr14:3434476 | Cma04g02680 | Cma-Chr4:18179202 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69065 | PF07714 | PK_Tyr_Ser-Thr | 2.90E-51 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g00675 | - | - | csv:101219563 | 645.195 |