Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00675 ATGGGTTCTGATAATAGGTTCTATTCCACTGATGAATTCTATTTGGATGCCAAATGGTTGATTGATCCTAGACATCTTTTTGTTGGGCCGAAGATTGGGGAAGGTGCCCATGCTAAGGTGTATGAGGGAAAATACAAAACTCAGATTGTAGCTATCAAAATAGTGGGCAAAGGAGATACTCCTGAGAGGATGGTCAGAAGAGCAGCTCGGTTTGCCAGAGAGGTAGCAATGTTGTCCAAAGTGCAGCACAAGAACTTAGTGAAGGCAATGATCAATTCTACTTTTGGAACTTTTGCTTCTTTTTATCACTTTATTGGCGCTTGCAAGGAACCTGTGATGGTTATAGTGACTGAATTGCTCACAGGCGGCACATTGCGTAAATATCTATTGAATTTGAGGCCAATGAGCATGAAACTTAATGTGGCGATTGGGTTTGCGCTTGATATTGCTCGTGCAATGGAGTGTTTACACTCACATGGAATTATTCACCGTGACCTTAAACCAGAAAACTTGATATTGAGTGCAGATCATAAAACAGTTAAGCTTGCTGATTTTGGTTTGGCAAGAGAAGAATCGGTAACAGAGATGATGACTGCAGAAACAGGAACATATAGATGGATGGCTCCAGAGCTCTATAGCACAGTCACTTTAAAACATGGAGATAAAAAGCATTATAATCATAAAGTTGATGTATACAGCTTTGCCATTGTCTTGTGGGAGCTCATCCTTAACAGGTTGCCTTTCGAAGGCATGTCGAATTTACAGGCAGCATATGCAGCGGCTTTTAAGAACATGAGGCCCAGTGCTGAAAACCTTCCAGAGGACTTAGCTTTATTAGTGACATCATGTTGGAGAGAGGATCCAAATACAAGGCCAAACTTTAGCCAGATTATACAGATGCTATTGCAGTCCCTGGCTAGAATATCACCTCGAGAACCCGTAATCCCGCCTCGGATATGTGCTTCTGAAAATGTCATGATGCCACCTGAATCTCCCGGTACAGATTCCTTGATGGCTGTCCGACATGGCTCAGGGGAAGCCTCACACGGCATGATAGAAGAAACCCCTAAAAGCTCCTTCTTCTGCTTTAACAAGTGTTACTGA 1104 42.66 MGSDNRFYSTDEFYLDAKWLIDPRHLFVGPKIGEGAHAKVYEGKYKTQIVAIKIVGKGDTPERMVRRAARFAREVAMLSKVQHKNLVKAMINSTFGTFASFYHFIGACKEPVMVIVTELLTGGTLRKYLLNLRPMSMKLNVAIGFALDIARAMECLHSHGIIHRDLKPENLILSADHKTVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLKHGDKKHYNHKVDVYSFAIVLWELILNRLPFEGMSNLQAAYAAAFKNMRPSAENLPEDLALLVTSCWREDPNTRPNFSQIIQMLLQSLARISPREPVIPPRICASENVMMPPESPGTDSLMAVRHGSGEASHGMIEETPKSSFFCFNKCY 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3434476 3437564 + CmaCh14G006750.1 Cma14g00675 307658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00675 367 Pfam Protein tyrosine and serine/threonine kinase 29 301 IPR001245 GO:0004672|GO:0006468
Cma14g00675 367 SUPERFAMILY Protein kinase-like (PK-like) 16 326 IPR011009 -
Cma14g00675 367 CDD STKc_MAP3K-like 32 301 - -
Cma14g00675 367 ProSitePatterns Protein kinases ATP-binding region signature. 32 57 IPR017441 GO:0005524
Cma14g00675 367 SMART serkin_6 26 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00675 367 PANTHER PROTEIN KINASE ATN1 1 344 - -
Cma14g00675 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Cma14g00675 367 PANTHER SERINE-THREONINE PROTEIN KINASE 1 344 - -
Cma14g00675 367 PRINTS Tyrosine kinase catalytic domain signature 117 130 IPR001245 GO:0004672|GO:0006468
Cma14g00675 367 PRINTS Tyrosine kinase catalytic domain signature 229 251 IPR001245 GO:0004672|GO:0006468
Cma14g00675 367 PRINTS Tyrosine kinase catalytic domain signature 272 294 IPR001245 GO:0004672|GO:0006468
Cma14g00675 367 PRINTS Tyrosine kinase catalytic domain signature 155 173 IPR001245 GO:0004672|GO:0006468
Cma14g00675 367 ProSiteProfiles Protein kinase domain profile. 26 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00675 367 Gene3D Transferase(Phosphotransferase) domain 1 21 312 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma04g02680 Cma14g00675 CCT
Cma04g02680 Cma14g00675 ECH
Cma11g01458 Cma14g00675 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00018 Cma-Chr14:75726 Cma14g00675 Cma-Chr14:3434476 4.96E-140 dispersed
Cma14g00675 Cma-Chr14:3434476 Cma12g00938 Cma-Chr12:7297489 3.41E-72 dispersed
Cma10g00092 Cma-Chr10:373193 Cma14g00675 Cma-Chr14:3434476 0 wgd
Cma11g01458 Cma-Chr11:9621175 Cma14g00675 Cma-Chr14:3434476 0 wgd
Cma11g00066 Cma-Chr11:334910 Cma14g00675 Cma-Chr14:3434476 7.40E-125 wgd
Cma14g00675 Cma-Chr14:3434476 Cma04g02680 Cma-Chr4:18179202 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69065 PF07714 PK_Tyr_Ser-Thr 2.90E-51 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00675 - - csv:101219563 645.195