Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma14g00746 | ATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATTCGCCAGGAAGCGGAGGAAAAGGCCAACGAGATCTCCGTCTCCGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAGATGAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGTATCAAAGTTCTGCAAGCTCAGGATGACGTAGTAAATTCTATGAAAGAGGCAGCATCAAAAGAACTTCTGAATGTAAGCCAAAATGAACATGTCTACAAAAATCTTTTGAAGGATCTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTATTGCGATGCCGTGAAAGTGATGTCCATTTGGTGGAGTCTGTGCTGCGTTCAGCAGCCGTGGAGTATGCAGAGAAAGTAAAAGTTCACGAGCCAGAAATTATTGTTGATCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCACGTATTGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCAAGGTTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGAACTAG | 636 | 44.65 | MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKMRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSQNEHVYKNLLKDLIVQSLLRLKEPAVLLRCRESDVHLVESVLRSAAVEYAEKVKVHEPEIIVDHVHLPPGPSHHHHHVLASRDGKIVCENTLDARLDVVFRKKLPEN | 211 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 3716779 | 3720823 | - | CmaCh14G007460.1 | Cma14g00746 | 307729 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma14g00746 | 211 | Hamap | V-type proton ATPase subunit E [atpE]. | 8 | 211 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
| Cma14g00746 | 211 | PANTHER | ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED | 1 | 209 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
| Cma14g00746 | 211 | SUPERFAMILY | V-type ATPase subunit E-like | 87 | 210 | - | - | |
| Cma14g00746 | 211 | PANTHER | BNAC03G72900D PROTEIN | 1 | 209 | - | - | |
| Cma14g00746 | 211 | Gene3D | - | 92 | 211 | IPR038495 | - | |
| Cma14g00746 | 211 | Pfam | ATP synthase (E/31 kDa) subunit | 16 | 210 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
| Cma14g00746 | 211 | Coils | Coil | 38 | 63 | - | - | |
| Cma14g00746 | 211 | Gene3D | - | 1 | 62 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma11g01534 | Cma-Chr11:10005362 | Cma14g00746 | Cma-Chr14:3716779 | 9.28E-134 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma14g00746 | K02150 | - | csv:101217221 | 368.622 |