Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00820 ATGAAGCAAGACAACACTCATCAATCCCCAAACCCCACCGCCGCCGAGACCAAGAAATTGGCGGTAGGTGACCAGGACGAAGACAAGCTTCTAGCTGCTCTAGGCTACAATGTCCGGTCGTCGGACATGTCTGATGTAGCTCTGAAAATAGAACAGCTTGAAATGGTGATGGGGTTATCCGAACATGATGGAATTTCTCCTCTCTCTTCCAATACAAACCATTATAATCCCTCCGATATGTCTTCTTGGATTGAAACCATGATTGATGAACTCAATAACCCTGTTCATGCCGGAGCTGAATCCATCCCCGCCATTGCCACCACTGCCGCCTTCACCGATGACTCTGAGTACGATCTTCGAGTAATTCCGGGCATTTCCGCTTTCCCTCAACTTAATTCCACCAGCACCAGAAAACGATACAAGAACTCCGATTGCGAATCGGTTCTTGTTAACGCACCGTCGTTCTCGGAGCCGTCGCGCTCGGTGGTTCTGGTGGATTCCGCTGAGACCGGCGTCCATTTGGTCCATAGCCTCCTTGCCTGCGCCGATGCCGTCAGTAAAAACAACATCAACCTCGCCGAAGCTATACTCAAACATATCAAAATCCTCGTCGACGCTCAGGCCGGCGCTGTAAGAAAAGTTGCCGGGTATTTCACCCAAGCCCTGACTTACCGGATTTACCGATTCTACCCATTGAAGCCCTTCGAATGTTCATCTTCATACACCGATCAACTCCAAATCCATTTCTATGAATCTTGCCCTTATCTGAAATTTTCCCATTTCACTGCCAATCAAGCCATTCTGGAATCCATCGGATTATCCGGTTCTGTCCACGTCATCGATTTCAACCTCCAGCAAGGCCTCCAATGGCCGCCGTTGATTCAGGCCCTCGCACTCCGTCCAGGTGGACCTCCGGCGTTTTATCTCACTGGAATCAGCTCCCCGCCGGGCGACGGATTACAGAAAGTGGGTACGAAATTGGCCAATTTCGCGGAGAAATTCGGCGTTAAATTCGAATTCCGTGGTTTCTACTGTAAAAATTTCGGCGATCTCGAACCGTTCATGCTCGATTTAGAAGCGGAAACCGTGGCTATAAATTCCATTTTCGAGCTCCACCGGCTACTGGCTTATCCAGGAGCGATTCAGAAAGCTCTAACCACAATCAAAGCTCTGAACCCGAAAATCATCACTCTGGTGGAGCAGGTCGCGAACCACAATGGGCCATCGTTCATGGAACGATTCACAGAAGCACTGCACTATTACTCGAGCTTATTCGATGCACTTGAAGAAGCGTCGGCCGCTGGGTCGTTGGATGTAGTGAGGTCGGAGGAGTATTTAGGGAGACAAATCTGCAACGTGGTGGGATGTGAAGGTACCGATCGCGTCGAGCGGCATGAAACGGTGGCGCAGTGGCTGAGCCGAATGCAGTCGAGTGGGTTCGAGATGATTCATCTGGGTTCAAACGCATTCAAGCAGGCGAATACTCTGTTGTCGGCTCTGTTCCATGGAAGAAATGGGTACAAAGTTGAAGAGAATAACGGGAGTTTGACGTTGGGTTGGCACACTCGCCCGCTCATCGCCACCTCTGCCTGGACTGTCCCCGTAGCCAGCGGCAGCGGCACCGGCACCGGCGAGCCGAAGTGA 1644 51.16 MKQDNTHQSPNPTAAETKKLAVGDQDEDKLLAALGYNVRSSDMSDVALKIEQLEMVMGLSEHDGISPLSSNTNHYNPSDMSSWIETMIDELNNPVHAGAESIPAIATTAAFTDDSEYDLRVIPGISAFPQLNSTSTRKRYKNSDCESVLVNAPSFSEPSRSVVLVDSAETGVHLVHSLLACADAVSKNNINLAEAILKHIKILVDAQAGAVRKVAGYFTQALTYRIYRFYPLKPFECSSSYTDQLQIHFYESCPYLKFSHFTANQAILESIGLSGSVHVIDFNLQQGLQWPPLIQALALRPGGPPAFYLTGISSPPGDGLQKVGTKLANFAEKFGVKFEFRGFYCKNFGDLEPFMLDLEAETVAINSIFELHRLLAYPGAIQKALTTIKALNPKIITLVEQVANHNGPSFMERFTEALHYYSSLFDALEEASAAGSLDVVRSEEYLGRQICNVVGCEGTDRVERHETVAQWLSRMQSSGFEMIHLGSNAFKQANTLLSALFHGRNGYKVEENNGSLTLGWHTRPLIATSAWTVPVASGSGTGTGEPK 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4141137 4142780 - CmaCh14G008200.1 Cma14g00820 307803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00820 547 PANTHER DELLA PROTEIN RGL1 25 532 IPR030006 GO:0003712|GO:0005634
Cma14g00820 547 ProSiteProfiles GRAS family profile. 165 532 IPR005202 -
Cma14g00820 547 SMART DELLA_2 28 101 - -
Cma14g00820 547 MobiDBLite consensus disorder prediction 1 15 - -
Cma14g00820 547 Gene3D - 26 91 IPR038088 -
Cma14g00820 547 MobiDBLite consensus disorder prediction 1 22 - -
Cma14g00820 547 Pfam Transcriptional regulator DELLA protein N terminal 28 94 IPR021914 -
Cma14g00820 547 Pfam GRAS domain family 174 532 IPR005202 -
Cma14g00820 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 532 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00820 Cma-Chr14:4141137 Cma15g00743 Cma-Chr15:3614862 0 dispersed
Cma01g00377 Cma-Chr1:1893834 Cma14g00820 Cma-Chr14:4141137 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36246 PF03514 GRAS 1.80E-117 CL0063 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00820 K14494 - csv:101203095 778.859