Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00829 ATGGAGTTCCTCAGTGGATTCCTACGACGAATTTTAGCGGCGGCGCTTCTGGGTTTGCCCTTTTTGGGTTCTGTTCTCGCGGATCTGGCTTCCGACAGGGCGGCGCTGGTGGGTTTCCGGGCGGCCATGGGTGGTCGGCCCCGATTAGAGTGGAATATCTCCGAGGTATCTCCCTGTTCTTGGGCTGGTGTTGGCTGTGATAAGAATGGGGTTTTTGAGCTCCGGCTTCCGGCTATGGGGCTTTCCGGTGAACTTCCGGTGGGGCTTGGGAATTTGACGCAGTTACAAACTCTGTCTCTGAGGTTTAATGCCCTGTCTGGACGGATTCCGGCGGATTTTGCGAATCTTCGTGGGGTGAGGAATCTTTACTTGCAGGGGAATTTGTTTTCCGGCGAGATTCCGGCGTTTCTGTTCGATTTGAAGAATCTGGTTCGGTTGAACATGGCGGACAACAATTTTTCAGGTGAGATTTCATCTGGGTTCAACAATTTGTCCCGTTTGGCTACTCTGTATTTACAGAACAATCAGTTCACCGGAGTGGTTCCTGAGTTAAATCTTCATCTTGAACAATTTAATGTCTCGTTTAATCGATTGAACGGTTCGATTCCGTCGAAGCTCTCTGGTTTTCCAGCGAGTGTTTTTGAGGGAAATTTTCTCTGTGGGGCGCCATTGTTGCTCTGCAACTCGACCGAGCCGACCGAGCCAGGTCGAAAGTCGAAGCTCTCGGGTGGGACGATTGCCGGAATTGTGATAGGTAGTTTGTTTATTTTGGTATTGGTTTTGGTTGTTTTGATTCTCGTGTGTCAAAGAAAGAGGAAGGGGAAATTGGAGTCGAATGAGGGGGTTCGGTCGGCCGGTGAGGTTGAGGTGCCGGGGGAGAAGGCGGCGGCGGTGGAAGGGAGTGGCGAAAGTATAAACATAGATCATTTAATGGCAGCGAAATCGGTTGGGAAGGGCGGCGAGAGAGATAAGAGATTGGTGTTCTTTGGGAATGTGGGGAATGTGTTTGATTTGGAGGATTTGTTGAGGGCGTCTGCGGAGGTTCTCGGGAAGGGGACGTTCGGGACAGCGTATAAGGCGACGCTCGAGACGGGGACGGTGGTTGCTGTGAAGCGGTTGAAGGAGATGACGGCGGCGGAGAAGGAATTCAGGGAGAAGATCGAGGAGGTGGGGAGGATGAAGCATGAGAATTTGGTCCCTCTCCGAGCTTATTATTATAGCAGAGAGGAAAAGCTTTTAGTTTATGATTACATGCCGATGGGAAGCTTGTCTGCCCTTCTACATGGTAGTAGTAGAGAGTCAGGAAGGACTCCGTTGAATTGGGAAGCAAGGTGTGGCATAGCGCTCGGAGTAAGCCACGGGATTCATTACCTTCATTCTCAAGGCCCTACTATCTCTCACGGCAACATCAAGTCTTCAAACATTCTCCTCACTCAATCATACGAAGCATGCGTATCTGACTTCGGCCTTGCACAGCTAGCCATGTCTCCTTCCACTCCAAGTCGTGTTGCTGGGTACCGAGCCCCAGAGGTTACTGATTCTCGAAAAGTATCACAAAAAGCAGATATTTACAGCTTCGGAGTGCTATTATTAGAGATGCTAACAGGAAAACCTCCTACACATTCAATCTTCAACGACGAGGCGGTGGATCTTCCAAGATGGGTCCAGTCAGTGGTTCAAGAGGAATGGACAGCTGAAGTGTTTGATGAACAACTTCTTAGGTACCAAAATGTCGAGGAGGAGATGGTTCAACTCTTAGAACTCGCTCTGCAGTGCACCGTCCCATATCCCGACAACCGTCCAAAAATGGACGAAATCGTTCGACGAATCGAAGAACTCTGTCGATCGTCCTCACAAAAACAGAATGAGGGTATCGACAATGATGAAAGTAATGATATTTCTACACCGTCAAACTTTACTGGATGA 1926 49.43 MEFLSGFLRRILAAALLGLPFLGSVLADLASDRAALVGFRAAMGGRPRLEWNISEVSPCSWAGVGCDKNGVFELRLPAMGLSGELPVGLGNLTQLQTLSLRFNALSGRIPADFANLRGVRNLYLQGNLFSGEIPAFLFDLKNLVRLNMADNNFSGEISSGFNNLSRLATLYLQNNQFTGVVPELNLHLEQFNVSFNRLNGSIPSKLSGFPASVFEGNFLCGAPLLLCNSTEPTEPGRKSKLSGGTIAGIVIGSLFILVLVLVVLILVCQRKRKGKLESNEGVRSAGEVEVPGEKAAAVEGSGESINIDHLMAAKSVGKGGERDKRLVFFGNVGNVFDLEDLLRASAEVLGKGTFGTAYKATLETGTVVAVKRLKEMTAAEKEFREKIEEVGRMKHENLVPLRAYYYSREEKLLVYDYMPMGSLSALLHGSSRESGRTPLNWEARCGIALGVSHGIHYLHSQGPTISHGNIKSSNILLTQSYEACVSDFGLAQLAMSPSTPSRVAGYRAPEVTDSRKVSQKADIYSFGVLLLEMLTGKPPTHSIFNDEAVDLPRWVQSVVQEEWTAEVFDEQLLRYQNVEEEMVQLLELALQCTVPYPDNRPKMDEIVRRIEELCRSSSQKQNEGIDNDESNDISTPSNFTG 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4231658 4233998 - CmaCh14G008290.1 Cma14g00829 307812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00829 641 Gene3D Ribonuclease Inhibitor 29 220 IPR032675 -
Cma14g00829 641 MobiDBLite consensus disorder prediction 617 641 - -
Cma14g00829 641 SMART LRR_typ_2 116 140 IPR003591 -
Cma14g00829 641 SMART LRR_typ_2 92 115 IPR003591 -
Cma14g00829 641 SMART LRR_typ_2 164 187 IPR003591 -
Cma14g00829 641 Pfam Protein kinase domain 346 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00829 641 MobiDBLite consensus disorder prediction 616 641 - -
Cma14g00829 641 SUPERFAMILY L domain-like 50 209 - -
Cma14g00829 641 PANTHER OS05G0588300 PROTEIN 18 626 - -
Cma14g00829 641 Gene3D Transferase(Phosphotransferase) domain 1 418 637 - -
Cma14g00829 641 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Cma14g00829 641 SUPERFAMILY Protein kinase-like (PK-like) 347 610 IPR011009 -
Cma14g00829 641 CDD STKc_IRAK 349 613 - -
Cma14g00829 641 PANTHER INACTIVE RECEPTOR KINASE-RELATED 18 626 - -
Cma14g00829 641 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Cma14g00829 641 ProSiteProfiles Protein kinase domain profile. 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00829 641 Gene3D Phosphorylase Kinase; domain 1 320 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g02279 Cma-Chr4:15899495 Cma14g00829 Cma-Chr14:4231658 0 dispersed
Cma13g00981 Cma-Chr13:7624942 Cma14g00829 Cma-Chr14:4231658 0 dispersed
Cma14g00829 Cma-Chr14:4231658 Cma15g00759 Cma-Chr15:3708343 0 dispersed
Cma14g00829 Cma-Chr14:4231658 Cma18g00081 Cma-Chr18:358045 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69066 PF00069 Pkinase 5.80E-40 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00829 - - csv:101221942 1062.75