Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g00837 | ATGGAGAATTTAATGGGTCTGCTCAGAATCCATGTCTTTAGAGGTGTCAATCTTGCTGTAAGAGACGTTGTTAGCAGTGATCCATATGTCGTTTTCAAGATGGGCAAACAGAAGTTGAAGACCCGAGTAGTGAAACAAAATATCAACCCAGAGTGGAACGAAGATCTAACTCTATCAATCCAAGATCCAAATCTTCCCGTCTACTTGATTGTATACGACAAGGACAAGTTCTCGTTCGATGACAGGATGGGGGACGCGGAGTTCGACGTTCAACCGTTCATGGAGGCGGTGAAGATGAGATTGAACAACCTACCAAATGGAACCATCATAAGGAAGGTTCAACCAAGTAGGGAGAATTGCTTGTCTGAAGAGAGTTGCATAGTTTGGGGAAATGGTCAAGTTAGTCAAAGAATGTTTCTAAGGCTAAGAAATGTGGAGTCTGGTGAAGTTGAGCTGCAATTGCAATGGATTGATATTCCTGGCTCTAGGGGTATAAATTAA | 501 | 42.51 | MENLMGLLRIHVFRGVNLAVRDVVSSDPYVVFKMGKQKLKTRVVKQNINPEWNEDLTLSIQDPNLPVYLIVYDKDKFSFDDRMGDAEFDVQPFMEAVKMRLNNLPNGTIIRKVQPSRENCLSEESCIVWGNGQVSQRMFLRLRNVESGEVELQLQWIDIPGSRGIN | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 4298388 | 4299516 | + | CmaCh14G008370.1 | Cma14g00837 | 307820 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g00837 | 166 | Pfam | C2 domain | 6 | 94 | IPR000008 | - | |
Cma14g00837 | 166 | Gene3D | C2 domain | 4 | 161 | IPR035892 | - | |
Cma14g00837 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 164 | IPR044562 | - | |
Cma14g00837 | 166 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
Cma14g00837 | 166 | ProSiteProfiles | C2 domain profile. | 1 | 103 | IPR000008 | - | |
Cma14g00837 | 166 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 105 | IPR035892 | - | |
Cma14g00837 | 166 | CDD | C2_ArfGAP | 6 | 148 | - | - | |
Cma14g00837 | 166 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE | 1 | 164 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g00363 | Cma14g00837 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma03g00593 | Cma-Chr3:5292547 | Cma14g00837 | Cma-Chr14:4298388 | 4.93E-45 | dispersed | |
Cma10g00328 | Cma-Chr10:1510138 | Cma14g00837 | Cma-Chr14:4298388 | 2.05E-83 | dispersed | |
Cma11g00314 | Cma-Chr11:1562997 | Cma14g00837 | Cma-Chr14:4298388 | 1.20E-81 | dispersed | |
Cma13g00989 | Cma-Chr13:7660727 | Cma14g00837 | Cma-Chr14:4298388 | 3.32E-79 | dispersed | |
Cma14g00837 | Cma-Chr14:4298388 | Cma18g00074 | Cma-Chr18:329922 | 1.78E-82 | dispersed | |
Cma01g00363 | Cma-Chr1:1803784 | Cma14g00837 | Cma-Chr14:4298388 | 9.16E-63 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g00837 | - | - | csv:101218477 | 305.449 |