Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00890 ATGGCTGGCCGGATCTCCGGTGGTGCACAGGAAGTTTCCGCCGTCGTCTCCATAGAAGAGGAAGAAGTTGCGCCGTCTGGTTCCGATGTTCCGACTCCTCAAGAGAGGAAAATGTCGTGGCAAAATCTCCGGCGACACGACTCCTTGTATTTAGAGTCCCGTAAACTCCATGGTCGCGATCACTCCGATGCCGACAAGAAGAAATGGAGTGTGATATTACAACTAGCATTCCAGAGCATCGGAGTTGTGTACGGAGACATTGGAACCTCGCCGCTCTACGTGTACGCCGGCATCTTTCCGAAGGGAATCAAGCACCAGGACGACGTTTTAGGAGCGATGTCTTTGATCTTCTACACCTTAACTCTCATTCCAGTCATTAAATACGTGTTCATCGTCCTCAGAGCCAACGACAACGGCGATGGCGGAACCTTCGCACTGTACTCTCTGATTTGCCGGTATGCGAAAGTAGGGCTGATTCCAAACGCAGAGATGGAGGATGGAGAGGTGTCCAATTACCAATTGAATTTGCCGAATCGGAGACAGAAGAGAGCTTCGAGGATTCAGTCGGCGCTGGAGAACAGCCATTTTGCGAAGGTCTTTCTTCTCTTTGCGACGATGCTCGGAACCGCCATGGTTATCGGCGACGGCGTTCTCACCCCTTGTATCTCAGTTTTATCTGCTGTGGGAGGGATCACGGCGGCAACCCCTGCAATGACAGAAGGAAGGATTGTTTGGACTTCAGTAGCCATCTTGGTGTTTCTGTTCATGGCTCAAAGATTAGGAACCGACAAAGTTGGCTACACTTTTGCCCCAATCATCTTCATTTGGTTTGCTTTCATCGCTGCAATCGGTGTTTACAACTTCTTCAAATACGACCCAACTGTGATCAAGGCCTTAAATCCAGCCTACATTATTTATTATTTCCAAAGGAACAAAAAGGACGCTTGGATTTCTCTCGGCGGCGTTGTTCTTTGCATTACAGGGACGGAAGCATTGTTCGCCGACGTCGGGCATTTCAGCGTCCGATCGATCCAGCTGAGTATGTCCCTAGTGACCTACCCAGCTCTAATATGCGCTTATGCAGGCCAATCCTCGTTTCTTCGCAAGCACAGTGATCTAGTTTCGAATGCATTCTACAAGTCCACTCCTGGAAGTTTGTATTGGCCAATGTTTGTGGTGGCAGTTTTAGCATCAATCATAGCAAGCCAAGCCATGATCTCAGGAACTTTTTCTATAATTCAGCAGTCACTTTCACTTGGATGCTTCCCAAGAGTTAAAGTGGTTCATACTTCTGCTAAGCATGAAGGCCAAGTTTATGTTCCTGAGATCAATTACCTTCTCATGTTGGCTTGTGTTTGTGTTACTTTGGTCTTCAAGAATACTACAAATATCGGCAATGCATATGGAATAGCAGTGGTGTTTGTGATGACACTCACGTCCTCCTTCCTAGTATTGATAATGGTAATGATATGGAAAACCCACATCCTGTTGGTAATCACTTACGTTGTCATAATTGGGAGCGTGGAATTGGTGTATCTGAGTTCAGTTCTTTACAAGTTCGACCAAGGAGGGTATCTCCCTCTGGCTTTTGCAGCTGTTTTGATGACAATAATGTATGTGTGGAATAGTGTGTTTAGAAAGAAGTACTTTTACGAGCTCAACCACAAAATCTCTCCAGAAAAGTTCAATGAAATGGTGAGTACCACCAGCTTTAGAAGACTTCCTGGCATGGCATTTTTCTACACGGAGCTCGTTCAAGGCATCCCTCCCATCATCAAGCATTACATCGAGCACGTGCCCGCTTTGCAGTCTGTGCTCGTCTTTGTCACCATTAAATCGCTTCCTGTCAGCAAGGTTCCAGCAGACGAACGTTTCCTCTTCCGACGAGTAGAGGCAAAGGAGATCGACGTGTTTCGTTGTGTAGTTCGATATGGATACACGGAAGTGCGCGCCGAACATGAGCTGTTCGAGAAGATTTTACTGGAAAGATTGGAAGAGTTCGAAAGTGATGGACGGGCATTGTGTAACGGCGATGGGAGAGTTGAAGAAGCTGAAGAGGATAGGAATGGATTTGGAGGCGTTGCAGAAGCATGGAAGCAAGGAGTTGTTCATTTCATTGGGGAAACAGAGGTGGTTGCTAAACCGGGTGCTGGGTTTGGAGATAGGATTATGATAAACTATGCGTATAGCTTCTTGAAGAGAAATTTGAGGGAAACTGATCAAGTCTTTGAAATTCCTCACAAATGTATGCTCAAAGTTGGAATGACCTATGAACTTTAG 2280 46.36 MAGRISGGAQEVSAVVSIEEEEVAPSGSDVPTPQERKMSWQNLRRHDSLYLESRKLHGRDHSDADKKKWSVILQLAFQSIGVVYGDIGTSPLYVYAGIFPKGIKHQDDVLGAMSLIFYTLTLIPVIKYVFIVLRANDNGDGGTFALYSLICRYAKVGLIPNAEMEDGEVSNYQLNLPNRRQKRASRIQSALENSHFAKVFLLFATMLGTAMVIGDGVLTPCISVLSAVGGITAATPAMTEGRIVWTSVAILVFLFMAQRLGTDKVGYTFAPIIFIWFAFIAAIGVYNFFKYDPTVIKALNPAYIIYYFQRNKKDAWISLGGVVLCITGTEALFADVGHFSVRSIQLSMSLVTYPALICAYAGQSSFLRKHSDLVSNAFYKSTPGSLYWPMFVVAVLASIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSAKHEGQVYVPEINYLLMLACVCVTLVFKNTTNIGNAYGIAVVFVMTLTSSFLVLIMVMIWKTHILLVITYVVIIGSVELVYLSSVLYKFDQGGYLPLAFAAVLMTIMYVWNSVFRKKYFYELNHKISPEKFNEMVSTTSFRRLPGMAFFYTELVQGIPPIIKHYIEHVPALQSVLVFVTIKSLPVSKVPADERFLFRRVEAKEIDVFRCVVRYGYTEVRAEHELFEKILLERLEEFESDGRALCNGDGRVEEAEEDRNGFGGVAEAWKQGVVHFIGETEVVAKPGAGFGDRIMINYAYSFLKRNLRETDQVFEIPHKCMLKVGMTYEL 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4609242 4612815 + CmaCh14G008900.1 Cma14g00890 307873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00890 759 TIGRFAM kup: potassium uptake protein 75 758 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma14g00890 759 MobiDBLite consensus disorder prediction 17 38 - -
Cma14g00890 759 Pfam K+ potassium transporter 76 648 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cma14g00890 759 PANTHER POTASSIUM TRANSPORTER 29 757 - -
Cma14g00890 759 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 29 757 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00890 Cma-Chr14:4609242 Cma17g01110 Cma-Chr17:7779664 0 dispersed
Cma14g00890 Cma-Chr14:4609242 Cma17g01109 Cma-Chr17:7776646 3.13E-13 wgd
Cma14g00890 Cma-Chr14:4609242 Cma08g00406 Cma-Chr8:2327699 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00890 K03549 - csv:101215797 1177.93