Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00956 ATGGGGGTTGGTCTGTTCAAAGCCGCCATGGAAAGTGGCATGGCAACCATGGCTCTTTCATCTACATTCACCGGAAAGGCTATTCCTTTGAACGCACCAACCGAGCTCTCATCCTCGGTTCGCAGCAACAGTAGAGTCTCAATGAGGAGATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTACGGTCCCGACCGTGTCAAGTACCTTGGACCACTATCTGGTGAGCCTCCATCTTACCTCAAAGGGGAGTTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCCGATCCCGAGACCTTTGCCAAGAACCGGGAGCTGGAAGTGATTCACAGCAGATGGGCCATGCTCGGGGCTCTAGGATGTGTATTCCCAGAGCTTCTATCAAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTTAAGGCTGGTTCACAGATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCACGCACAGAGCATTTTGGCCATTTGGGCATCTCAAGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCTGGAGGACCACTTGGAGAAGTTACCGATCCCATCTACCCCGGAGGTAGCTTTGATCCCCTCGGGCTGGCTGACGATCCCGAGGCATTTGCAGAGCTTAAGGTTAAAGAACTCAAGAACGGCCGTCTTGCAATGTTTTCCATGTTCGGATATTTTGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCAGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTCCCTGGGAAGTGA 837 50.78 MGVGLFKAAMESGMATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGPLSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4960365 4962996 - CmaCh14G009560.1 Cma14g00956 307939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00956 278 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 14 278 IPR001344 GO:0009765|GO:0016020
Cma14g00956 278 Gene3D Chlorophyll a/b binding protein domain 69 271 - -
Cma14g00956 278 MobiDBLite consensus disorder prediction 39 54 - -
Cma14g00956 278 Pfam Chlorophyll A-B binding protein 78 244 IPR022796 -
Cma14g00956 278 MobiDBLite consensus disorder prediction 39 60 - -
Cma14g00956 278 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 14 278 - -
Cma14g00956 278 SUPERFAMILY Chlorophyll a-b binding protein 61 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g00956 Cma-Chr14:4960365 Cma20g00260 Cma-Chr20:1270014 3.15E-162 dispersed
Cma01g00265 Cma-Chr1:1250267 Cma14g00956 Cma-Chr14:4960365 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00956 K08912 - csv:101203342 516.538