Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g00965 ATGTCTCGCCAAGTTCCTACTACTGCGTTCCATAAGTCCAAGACGCTTGATAATAAATATATGCTGGGAGATGAGATCGGAAAAGGAGCATATGGGCGAGTCTACAAGGGTCTGGATTTGGAGAACGGGGACTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACATTATCATGCAAGAGATTGACCTACTGAAGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTAAAAACAAAGACTCACCTTCACATAATACTTGAGTATGTGGAGAATGGATCACTTGCCAACATTATCAAGCCAAATAAGTTTGGACCTTTTCCAGAATCATTGGTCGCTGTTTATATTTCTCAGGTTTTGGAAGGCTTGGTTTATCTACATGAGCAGGGTGTAATTCATCGGGACATAAAGGGTGCGAACATACTGACAACCAAAGAGGGTCTCGTGAAACTTGCTGATTTTGGTGTTGCGACAAAATTAACAGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACACCTTACTGGATGGCTCCTGAGGTTATTGAAATGTCAGGAGTTTGTGCTGCTTCTGACATATGGAGTGTTGGATGTACTGTGATCGAACTACTTACATGTGTACCTCCATATTATGATCTACAACCTATGCCAGCTCTGTTTCGCATCGTACAGGACAAGCATCCTCCAATTCCGGATAGCTTATCACCAGATATCACAGATTTCTTACGCCAGTGCTTTAAGAAGGATGCCAGGCAAAGGCCCGATGCAAAAACTTTGCTTTCTCATCCATGGATTCAGAACTGTCGACGGGCCTTGCATTCTTCTCTTCGTCATAGTGGCACATTAAGAAACACTCAACTAGATGGATCAATTGAAGCAGAAATTTCTAATGGAGACGATCAAACCTCTTGTGAAGGCCCTTCAGCAGAAAAAAATGAAGTGACTGATTCTGATTTTAAAGCCGATTCCAGGAAGGAGTTGTCATCAGATGTTGTCACTGATATGAGCAAGTCCCAAAAAAATTTTGCTTCAGGGCCTAATTCTGTTGAGGAAGCAGAAAGTCTGGAAGATGACACCCTATTGGATCAAGTTCCTACCTTATCCATTCATGAAAATTCATCTCTTCTAACTGGTTCTGGCAGAATTGCTACCTCTGAGCCAATTGAGTTTCATGAATCTCATGGTAGAGCCCGTGATGAAGTGATAATGAATGGTGATGTGCCATCAACAGAACTAAGGGAAGACGCTGCTAGACAACATGGAGAGAAAGAAATTTCAACATCTGGAAATAGTTCATTTGGTTTTGAACCTGAAAGTCAGGACAATAGTTTTCAAAAGGTGTCAAAGATGTCAATTGCTTTGGGAGGAAATGAGCTGAGTAAATTTAGTGACACTCCGGGAGATGCTTCCTTAGATGATTTATTTCAACCTTTAGATAAGCTCTCTGGGGATCAAGCGGCTGAAGCATCAACATCTCTATCTACCCTACAATCAAACATGGGTTATCTGCCAGTAAATGATGTTGGAAAAAATGACCTGGCCACAAAATTGAGGGCTACAATTGCTCAAAAGCAAATGGAAAATGAAATGGGACAGGCAAGCAGTGGGGGTGACCTGCTTCGACTAGTGATGGGTGTTTTAAAGGATGATGATATTGATATTGATGGTTTGGTTTTTGATGAGAAGTTATCCGGAGAAAACCTTTTTCCCTTGCAGGCTGTTGAATTTGGCAGATTAGCTGGGTCATTGAGACCTGATGAACCCGAAGATGTAATTGTATCTGCCTGTCAAAAACTGATTGCTATCTTTCATCAAAGGCCTGAGCAGAAAATTGTTTATATTACGCAACATGGTCTACTCCCATTAACAGAGCTGCTTGAAGTTCCTAAAACTCGTATTATATGTTCAGTGCTCCAGCTTATAAATCAGATTGTTAAGGATAACGTTGACTTCCAGGAGAATGCATGTCTTGTTGGTCTAATTCCTCTGGTTATGGGCTTTGCGGTTCCTGATCGTCCCCGAGAGGTTCGTATGGAAGCAGCTTATTTCTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTTGCTTGCCGTGGAATACCTGTATTAGTAAGCTTTCTAGAGGCTGACTATGCAAAGTACAGGGACATGGTTCACCTAGCTATTGATGGGATGTGGCAGATCTTTAAACTGCAGCGTTCCACTCTTAGAAATGGTTTCTGTCGTATAGCTGCAAAAAGTGGAATCCTGCTTAGGCTCATTAACACCCTCTACAGCTTGAACGAGGCAACTCGCTTAGCTTCCATAACAGTCGGGGCAGGATATCCAGTTGATGGTTTACCTCAACGACCACGATCAGGTCAACTAGACCCTAGCCACCCTATATTCAGTCAGTACGAGGCCTCATTTCCTGTGCCTGATCAGCCTGATCTTTTGAAGGTCAGGCATGGAATGGTTGATCATCACCTGTCTACTGGAACACCAGAACCTTCTAGGGCTTCAACTTCACATTCTCAAAGATCAGATGCCAATCAATCTGATCACCGACAGTTTTTCACAGATGCTGATAGGCCTCAATCTAGCAATACCACAAATGAAGCCTTGGGATCTAAACCGTCAGAGCTAGCATCTTTGGATAAAGTTGTAAATTTAGCAACCAAGGAACCTTATGTCTCTGCTTCTAAAGAACATGAAAATGTAGATAGATGGAGACCTGAGAGGATGGCCAACTCTAACAGGACTTCCACAGATAGGCCTCCAAAATTAGTGGAACCTGTAGCTAATGGATTTCCTACAGCATTGGCAGCTACCCAGCAAGAGCAAGTTCGGCCCCTTCTAAGTCTGTTGGACAAAGAACCCCCGTCTCGACATTTTTCTGGTCAGCTCGAGTACATGCGCCACCTTTCTGGATTGGAAAGGCATGAAACTATAATGCCACTATTGCATGCATCAAATGAAAAGAAGATGAATGGGGAGCCTGATTTCTTAATGGCAGAATTCGCTGATGTTTCTCAACGTGGAAAAGACAATGGAAACCTTGACCCCACTTCTAAGGTTTCTCTTAAAGCGGTGGCCAAGAAGGTAGGACCCCAGGTTTCCAATGAAGGGGCTGCATCCACATCTGGAATTGCTTCACAGACAGCATCTGGGGTACTTTCAGGTTCAGGTGTATTAAATGCTAGACCAGGGAGTGCAACATCTTCTGGACTTCTTTCGCACATGGTTTCAACTTTGAATGCTGATGTAGCAAGGGAATACCTGGCGAAGGTAGCTGATCTTTTGCTTGAGTTTGCTCAGGCAGATACAACTGTTAAGTCATATATGTGTAGCCAAAGCTTGCTTAATCGCCTTTTCCAAATGTTCAATAGGGTAGAGCCCCCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACAGATCCAAACTGCTTAGAAAATCTTCAGCGAGCAGATGCAATTAAATATTTGATTCCAAACCTCGAACTCAAAGAAGGGTCTCTGGTGTCGCAAATACATACCGAGGTCCTCAGTGCACTATTCAATTTGTGTAAGATCAATAAGAGGAGACAAGAATATGCAGCTGAAAATGGAATTATTCCACACTTGATGCATTTTATTATATCAGACTCTCCTCTGAAACAATATGCATTGCCTCTACTGTGTGATATGGCCCATGCATCGCGTAATTCTAGGGAGCAGTTAAGAGCCCACGGAGGTCTAGATGTGTATTTGAGCCTGCTTGAGGATGAGCTTTGGTCTGTCACGGCATTGGATTCTATTGCTGTTTGCTTGGCTCATGACAATGACAACCGGAAAGTTGAACAAGCTTTGCTGAAGAAGGATGCTGTCCAGAAATTGGTGAAGTTTTTCCAGTGTTGTCCAGAACAACATTTTGTGCATATATTGGAGCCTTTCTTGAAAATCATTACAAAATCTTCCCGAATCAATACGACTTTGGCCGTGAACGGATTGACCCCATTGCTTATAGCAAGGCTGGACCACCAAGATGCGATTGCTCGGCTTAATCTACTTAAGCTGATAAAGGCTGTGTATGAGCATCATCCACGACCCAAGCAATTGATTGTGGAGAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGGGATGGACAACGGTCTGGTGGGCAGGTGTTGGTGAAGCAAATGGCCACATCTTTGCTTAAAGCTCTTCACATAAATACCGTCTTGTAA 4266 42.52 MSRQVPTTAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALHSSLRHSGTLRNTQLDGSIEAEISNGDDQTSCEGPSAEKNEVTDSDFKADSRKELSSDVVTDMSKSQKNFASGPNSVEEAESLEDDTLLDQVPTLSIHENSSLLTGSGRIATSEPIEFHESHGRARDEVIMNGDVPSTELREDAARQHGEKEISTSGNSSFGFEPESQDNSFQKVSKMSIALGGNELSKFSDTPGDASLDDLFQPLDKLSGDQAAEASTSLSTLQSNMGYLPVNDVGKNDLATKLRATIAQKQMENEMGQASSGGDLLRLVMGVLKDDDIDIDGLVFDEKLSGENLFPLQAVEFGRLAGSLRPDEPEDVIVSACQKLIAIFHQRPEQKIVYITQHGLLPLTELLEVPKTRIICSVLQLINQIVKDNVDFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYRDMVHLAIDGMWQIFKLQRSTLRNGFCRIAAKSGILLRLINTLYSLNEATRLASITVGAGYPVDGLPQRPRSGQLDPSHPIFSQYEASFPVPDQPDLLKVRHGMVDHHLSTGTPEPSRASTSHSQRSDANQSDHRQFFTDADRPQSSNTTNEALGSKPSELASLDKVVNLATKEPYVSASKEHENVDRWRPERMANSNRTSTDRPPKLVEPVANGFPTALAATQQEQVRPLLSLLDKEPPSRHFSGQLEYMRHLSGLERHETIMPLLHASNEKKMNGEPDFLMAEFADVSQRGKDNGNLDPTSKVSLKAVAKKVGPQVSNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSTLNADVAREYLAKVADLLLEFAQADTTVKSYMCSQSLLNRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSALFNLCKINKRRQEYAAENGIIPHLMHFIISDSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5026924 5053992 + CmaCh14G009650.1 Cma14g00965 307948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g00965 1421 MobiDBLite consensus disorder prediction 902 935 - -
Cma14g00965 1421 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 1377 - -
Cma14g00965 1421 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00965 1421 MobiDBLite consensus disorder prediction 432 451 - -
Cma14g00965 1421 MobiDBLite consensus disorder prediction 320 340 - -
Cma14g00965 1421 SMART arm_5 1201 1240 IPR000225 GO:0005515
Cma14g00965 1421 SMART arm_5 1155 1199 IPR000225 GO:0005515
Cma14g00965 1421 SMART arm_5 615 655 IPR000225 GO:0005515
Cma14g00965 1421 SMART arm_5 700 743 IPR000225 GO:0005515
Cma14g00965 1421 MobiDBLite consensus disorder prediction 341 357 - -
Cma14g00965 1421 MobiDBLite consensus disorder prediction 868 884 - -
Cma14g00965 1421 MobiDBLite consensus disorder prediction 292 319 - -
Cma14g00965 1421 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00965 1421 SUPERFAMILY ARM repeat 589 781 IPR016024 -
Cma14g00965 1421 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Cma14g00965 1421 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Cma14g00965 1421 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Cma14g00965 1421 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Cma14g00965 1421 MobiDBLite consensus disorder prediction 834 887 - -
Cma14g00965 1421 SUPERFAMILY ARM repeat 1082 1395 IPR016024 -
Cma14g00965 1421 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Cma14g00965 1421 CDD STKc_Cdc7_like 19 274 - -
Cma14g00965 1421 PANTHER MAP KINASE KINASE KINASE 2 1377 - -
Cma14g00965 1421 Gene3D Transferase(Phosphotransferase) domain 1 17 310 - -
Cma14g00965 1421 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g00965 1421 MobiDBLite consensus disorder prediction 422 451 - -
Cma14g00965 1421 MobiDBLite consensus disorder prediction 840 854 - -
Cma14g00965 1421 Gene3D - 582 784 IPR011989 -
Cma14g00965 1421 MobiDBLite consensus disorder prediction 904 921 - -
Cma14g00965 1421 MobiDBLite consensus disorder prediction 292 365 - -
Cma14g00965 1421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Cma14g00965 1421 Gene3D - 1072 1416 IPR011989 -
Cma14g00965 1421 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00337 Cma-Chr10:1564081 Cma14g00965 Cma-Chr14:5026924 1.50E-25 dispersed
Cma14g00965 Cma-Chr14:5026924 Cma17g00258 Cma-Chr17:1332965 1.58E-73 dispersed
Cma18g01102 Cma-Chr18:9013246 Cma14g00965 Cma-Chr14:5026924 5.16E-56 dispersed
Cma14g00965 Cma-Chr14:5026924 Cma01g00257 Cma-Chr1:1197052 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69070 PF00069 Pkinase 1.30E-72 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g00965 - - csv:101206469 2628.59