Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g01006 | ATGCGGAAGAAGCGTCGAGTTCCAGAGGTTCTATGGCGGCTCTTCCGCCACCGCGCACGCACGCTTGCTGAAACCATCACGTCATTACTTCCACCGGCCGATTGCCGCTGCGAGAGGCGGCGATGTCTGCACTGCAGCGGTGCTGCGCCGGAGGGTTTCCTCCTCAGACCAGGTGATCCTCGCGCTTATCGAGACCTTCTGACTCAGTGTTACGTTGTTGTCTCTGAGAAGGCGTCTCCGCGCTCTGATTTTTCAAATGAATCGCACTGGTCTCTGCATGAGATTGTGGTGAGGACTATAGAAATCATAATCAGTACACAACGGGTTGATAGCAATTTAATTTGCAGTGGTTTTGATAAGTTCACCCGGTCAAGTCCAGTTGTTGATCTTTTAACTTGTCCGGCCTGGGATCTTCTCTTAAGCCGGGTTAGGGATGATATGATGGTCTATCTGCTAATGCATACTTCAATATTCTTGCCCCAACCAAAGAAGAGGCATTATCAGGTGGCAGGTCTTCCCATCAATAATTTATGCATTAAGTTGTCAGAATATTCAGCTGTTTCCCCAAATCAAAGTAATTTATTTGGTAAACATGGACTGCAGAAGAGGAAAAGAGATGGTGATCAACCTTGTGGTTCCTTCATTGATACTTGTCCTCCCTTTCACACCGAATATTTTTCTGGGTGCAAAAGTAGTTATTGCCAATCATCATGCTGGGATCAAGAGGACAAACAGTTCCAATTGGGTTCATTGAACATAATTAGTCAATCGATCAGTATTCCTACTCCCACTCTTGAAAATAATTCAGATAGGAAATCAGAAAAGTCGAGCACGTCTGTTACAAAACTCGGAAAGCGTTCAAGGCCATTTAGATGGCAACGGGAAAGAAAGCGTAGGCTATTAGATCCTGGCAATAGTTGGGGGTTGACCCCTTGCACGTCAACGTATTCTGATAAGAATACCTTACATGAGAAGCCTCCAAATCAGTTTAGTGCACACTCATGCCATTCCCACAAGCAATCTCGAAAGAATATTGAAGAGGTTTACATCAACAGGAAATCCATGTTTTACAATCTGGATTGTCCTTCAGCAATTCTTCTGAAAGGAAGTATCCTATTTTTAGATATACTTCGTTCCTTGAAGCCAAACTTTGCTGGTTCAGATAGTCTTGCTAGATATATCTTTGGTTCATATGATACAAATGGAAATGCGCCTTCCTCATTACTCATCTGCAACGATGGCACCTGTCCATTTGGATCAAAATGCCTATATCATTCACTTACCAAATTGCTCAAAGTTCTGATTCGTAGAAGCCGTAATTGTCAGTATGTTAGATTATTGGATAAGCACTGTGGTGCCCCGTCGTTAGACCAAATATCCATTGGAAATTCAGGCTCCATCTTTGAGTGTCATGGAAGTGAGTTGAATAGAGATATTGGTGAAGGCACCCGTGGTTCTGATGTCAAACATAGCAAGAATTATCTAGAAGCAATCGATCCTCAATTTGCGGCCAAGTTCTATTGCCCCAAAAATCAGGTGGTCTCATTCATATGGGCGGTTTGTCGGAGTATAGTTCCTGCAGATATGCTGGGAACCTGTTCTAATTGGAGAATATTGAGGAGAAATATTTCCAAGTTTATAAAATTAAGAAGATTTGAAAACTTTTCCCTGAAGCAAGCTATGCATAAATTGAAAATCTCATGGTTTCCATTTTTATCAGATAAACATTCTTTATGTTGCCAGAATGGTAAGGTGCCAAACTCTGTGGAGCTGAGGAGGGTTATGCACGAAGGATTCAGCATGTCAAAGGAAGCAGCATACATGATGAAACACAATCTTACGGAAAGTTGGATTTATTGGTTATTTTCACACTTAATTGTACCATTGATCCAAGCACACTTCTACGTTACTGAAACTGAATTTGGGAAACAAGATGTTTATTTTTTCCGGAAGTCAATATGGGAGAAGTTAACAAAGGGCGCTACCACTAGCTTTAAGGATAAAGGTTATTGTAACTTGAATGACTCAGCTGTCAGAAATATTCTTGCAAATAGATCATTTGGTTTCTCAAAACTTAGGCTTTGCCCAAAAGAAAATGGAGTAAGGATTCTGGCAAATCTCAAGGCATGTTCAAGAATGCCAACAGAAGAGTTCTATTTCAAAGATGGTCAATCTTGTGGAGTGCATGGAAAGAAAAAGCGAATCAAGTTTGATTACTACAAGTCTGTGAACAATGTTCTTAGAGATACCCACGCTGTTCTGAAAGGTATTAAGTTGAAAGAACCAGAGCTTTTGGGATCGTCGGTATTTGATTACAATGATGTCTATAAAAAGTTACGTATACTTTTACTTGGACTGGAGAAGGCTAAGGCTTCCATGCCTGGCTTATTCCTTGTTGTTTCTGATGTATCAAATGCATTTGATTCTATTGATCAAGATAAGCTGCTTGATGTGATGAAAAACATTATTGTGAAAGATGAGTATCATCTTAAACAATACCATTACGTTTTATGCACAAAGAAGACTTTGTGGGTTCATGAGAATGTAATGTTGGTTGATCCAAATATGAGCCCAAGATTTTCTCCTCCACAGTTTCATTCCTTGCATAGCGTCCTTGTTAATCAGGATCTGTGTAGCTTTTTAAACAAGGAAAAGCTCTTTTATACCCTACGTGAGCACGTGAAGCGAAATGTTATGCAATTTGATAAAAAGTTTTACTTACAAAGAACAGGTATTCCTCAAGGAAGTGTTTTATCATCTTTGCTCTGCTCATTATACTTCGGAGATCTCGAGAGGAAGGTGATTTTTCCATTTCTTGGGAGAGTTGTTGAATCTAAGGTTGACAATCCATCTGTGAGACAAAATTGTCTTGACCCTTCTATTTCCCTGAGTAGCAAGGAGGATGAAATGATAACAAATCCTAGTTATTTGCTGCTTAGATTTATTGATGATTTCCTTTTCATATCAACCTCGAAGCATCTGGCAGCAAATTTCTTATTCAGACTTCACAGAGGATTCCGGGAATATAATTGCTACATGAATGAAAGTAAGTTTGGTCTGAACTTTGATGTGGGAAATACATCAGGACTCGTCTCCAAAAGAGTCTATGTTGGTAAAGATGGCATTTCATTTCTTCGATGGAGTGGTTTGCTCATCAACTGTCAGTCTCTCGAAATTCAGGCAGACTACACAAAGTATTTGAATAACCACTTAAATTCAACCCTAACTGTTTGCTGGAAAGGCAAACCTGGACATCATCTGAAGGCAAAGCTGTGTGACTATTTAAGGCCCAAATGCCATCCGATCTTCTTTGATTTGAATATCAATACTGCTGCAGTTGTCAGATTAAACATTTTTCAAGCATTTCTTTTATGTGCCATGAAGTTCCATTGCTACATATGCCATTTGTCATATATGTGCAAATTCAGCAGAAAATTTCTTTTGAACATCATTCTAAGATCTCTAAGGTACATGGATGTGCTCGTAAAGAATAGGATGTCTTCTATTCAGCTCGATTTGCTTCCACGTCCAAGATTGCAGTTAGAGGATGGAGAAGTTGAATGGCTAGGACTAAATGCTTATGTTCAAGCATTGACAAGGAAACAGGCACGACATGCTCGGTTACTGTCATTGTTGAAGTCGAGGTTAGTTGCTCATCAGTTGTCGGGGTGCATCTCTTCGGATCTGATCTATGCAGTTGATCCCTCACATTCCTCCTTACTCTGGAAAATCAAGCCGAACCTTGTGTTTGAGAAATTAGGGTTTCTTTGTAGAGAAATGGCGTTGGCTAGTCGCATGAGATCCACCATCCCTGTTCTCAGCAATTTTTTGAGGTCCGAATCGTCCTGCACTCCGCTCTCAAGGACTTATGCCGCTACATCAGGGAAAAGTGAAGCAAAAGTGAAGGTTCCTATTGCATTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTCTGTATATAGCTGCAGTAAAAGCTAATTCTTTAGACAACGTGGAGTCTGAGCTTGTTAACTTTGTCGAGGCTATTAAGAAAAGCCCAACATTTTCTCAGTTCACAATGGACCTGTCAGTTCCAGCTGAAACTAGAGTTAAGGCTATCACTGAAATTTCTGCGGAAGCTAAATTTTCGGATGTCGTAAAGAACTTTTTAGTTGTGCTGGCTGAGAATGGGAGGCTGAGATATGTAGATAGTATAGCAAAGAGATTTTTGGAGTTGACTATGGCTCATAGGGGAGAAGTTAAAGCATTTGTTACTACTGTTATTCCCATTCCACCACAAGAAGAGAAAGAATTGACGGAGACGTTGCAAGATATAATTGGACAGGGAAAGAAGGTTAAGCTCGAGCAGAAGATTGATCCCAGCATACTTGGTGGTCTAGTTGTAGAATTTGGCGAGAAGGTATTTGACATGTCCATTAAAACCCGGGCACGTCAAATGGAGAGGTTCTTGTGTCAACCTGTAACTTTTGATGGACTCTGA | 4479 | 40.54 | MRKKRRVPEVLWRLFRHRARTLAETITSLLPPADCRCERRRCLHCSGAAPEGFLLRPGDPRAYRDLLTQCYVVVSEKASPRSDFSNESHWSLHEIVVRTIEIIISTQRVDSNLICSGFDKFTRSSPVVDLLTCPAWDLLLSRVRDDMMVYLLMHTSIFLPQPKKRHYQVAGLPINNLCIKLSEYSAVSPNQSNLFGKHGLQKRKRDGDQPCGSFIDTCPPFHTEYFSGCKSSYCQSSCWDQEDKQFQLGSLNIISQSISIPTPTLENNSDRKSEKSSTSVTKLGKRSRPFRWQRERKRRLLDPGNSWGLTPCTSTYSDKNTLHEKPPNQFSAHSCHSHKQSRKNIEEVYINRKSMFYNLDCPSAILLKGSILFLDILRSLKPNFAGSDSLARYIFGSYDTNGNAPSSLLICNDGTCPFGSKCLYHSLTKLLKVLIRRSRNCQYVRLLDKHCGAPSLDQISIGNSGSIFECHGSELNRDIGEGTRGSDVKHSKNYLEAIDPQFAAKFYCPKNQVVSFIWAVCRSIVPADMLGTCSNWRILRRNISKFIKLRRFENFSLKQAMHKLKISWFPFLSDKHSLCCQNGKVPNSVELRRVMHEGFSMSKEAAYMMKHNLTESWIYWLFSHLIVPLIQAHFYVTETEFGKQDVYFFRKSIWEKLTKGATTSFKDKGYCNLNDSAVRNILANRSFGFSKLRLCPKENGVRILANLKACSRMPTEEFYFKDGQSCGVHGKKKRIKFDYYKSVNNVLRDTHAVLKGIKLKEPELLGSSVFDYNDVYKKLRILLLGLEKAKASMPGLFLVVSDVSNAFDSIDQDKLLDVMKNIIVKDEYHLKQYHYVLCTKKTLWVHENVMLVDPNMSPRFSPPQFHSLHSVLVNQDLCSFLNKEKLFYTLREHVKRNVMQFDKKFYLQRTGIPQGSVLSSLLCSLYFGDLERKVIFPFLGRVVESKVDNPSVRQNCLDPSISLSSKEDEMITNPSYLLLRFIDDFLFISTSKHLAANFLFRLHRGFREYNCYMNESKFGLNFDVGNTSGLVSKRVYVGKDGISFLRWSGLLINCQSLEIQADYTKYLNNHLNSTLTVCWKGKPGHHLKAKLCDYLRPKCHPIFFDLNINTAAVVRLNIFQAFLLCAMKFHCYICHLSYMCKFSRKFLLNIILRSLRYMDVLVKNRMSSIQLDLLPRPRLQLEDGEVEWLGLNAYVQALTRKQARHARLLSLLKSRLVAHQLSGCISSDLIYAVDPSHSSLLWKIKPNLVFEKLGFLCREMALASRMRSTIPVLSNFLRSESSCTPLSRTYAATSGKSEAKVKVPIALFGGSGNYASALYIAAVKANSLDNVESELVNFVEAIKKSPTFSQFTMDLSVPAETRVKAITEISAEAKFSDVVKNFLVVLAENGRLRYVDSIAKRFLELTMAHRGEVKAFVTTVIPIPPQEEKELTETLQDIIGQGKKVKLEQKIDPSILGGLVVEFGEKVFDMSIKTRARQMERFLCQPVTFDGL | 1492 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 5295228 | 5308428 | - | CmaCh14G010060.1 | Cma14g01006 | 307989 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g01006 | 1492 | SMART | Telomerase_RBD_2 | 511 | 667 | IPR021891 | GO:0003964 | |
Cma14g01006 | 1492 | CDD | TERT | 901 | 1053 | - | - | |
Cma14g01006 | 1492 | Hamap | ATP synthase subunit delta [atpD]. | 1306 | 1485 | IPR000711 | GO:0015986|GO:0046933 | |
Cma14g01006 | 1492 | TIGRFAM | ATP_synt_delta: ATP synthase F1, delta subunit | 1313 | 1482 | IPR000711 | GO:0015986|GO:0046933 | |
Cma14g01006 | 1492 | Gene3D | - | 969 | 1065 | - | - | |
Cma14g01006 | 1492 | Pfam | ATP synthase delta (OSCP) subunit | 1312 | 1481 | IPR000711 | GO:0015986|GO:0046933 | |
Cma14g01006 | 1492 | Gene3D | - | 1071 | 1229 | - | - | |
Cma14g01006 | 1492 | ProSitePatterns | ATP synthase delta (OSCP) subunit signature. | 1445 | 1464 | IPR020781 | GO:0015986|GO:0016020|GO:0046933 | |
Cma14g01006 | 1492 | MobiDBLite | consensus disorder prediction | 261 | 288 | - | - | |
Cma14g01006 | 1492 | Gene3D | - | 367 | 676 | - | - | |
Cma14g01006 | 1492 | ProSiteProfiles | Reverse transcriptase (RT) catalytic domain profile. | 676 | 1052 | IPR000477 | - | |
Cma14g01006 | 1492 | PANTHER | TELOMERASE REVERSE TRANSCRIPTASE | 3 | 1245 | IPR003545 | GO:0003677|GO:0003721 | |
Cma14g01006 | 1492 | PRINTS | ATP synthase delta subunit signature | 1391 | 1405 | IPR000711 | GO:0015986|GO:0046933 | |
Cma14g01006 | 1492 | PRINTS | ATP synthase delta subunit signature | 1380 | 1391 | IPR000711 | GO:0015986|GO:0046933 | |
Cma14g01006 | 1492 | PRINTS | ATP synthase delta subunit signature | 1310 | 1329 | IPR000711 | GO:0015986|GO:0046933 | |
Cma14g01006 | 1492 | PRINTS | ATP synthase delta subunit signature | 1458 | 1476 | IPR000711 | GO:0015986|GO:0046933 | |
Cma14g01006 | 1492 | PRINTS | ATP synthase delta subunit signature | 1443 | 1458 | IPR000711 | GO:0015986|GO:0046933 | |
Cma14g01006 | 1492 | SUPERFAMILY | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 1311 | 1412 | IPR026015 | - | |
Cma14g01006 | 1492 | Pfam | Telomerase ribonucleoprotein complex - RNA binding domain | 512 | 663 | IPR021891 | GO:0003964 | |
Cma14g01006 | 1492 | Gene3D | - | 1311 | 1403 | IPR026015 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma01g00931 | Cma-Chr1:5787559 | Cma14g01006 | Cma-Chr14:5295228 | 8.01E-15 | dispersed | |
Cma09g01282 | Cma-Chr9:8822951 | Cma14g01006 | Cma-Chr14:5295228 | 6.76E-15 | dispersed | |
Cma01g00223 | Cma-Chr1:1027840 | Cma14g01006 | Cma-Chr14:5295228 | 1.52E-138 | wgd | |
Cma14g01006 | Cma-Chr14:5295228 | Cma17g00952 | Cma-Chr17:7086849 | 1.65E-89 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g01006 | K11126 | - | csv:101209644 | 1884.0 |