Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01039 ATGGCTGTTGAAGCTCTTCAGAATGACTTCATTTTCCGCTCCAAACTGCCCGATATTTACATTCCTAACCACCTTCCTCTGCACTCCTATTGCCTACACGAAAACCTCGCCAAAATCGGCCACCGGACTTGTCTAATCAATGCCGTCACTGCCGAATCCTTTACCTACCACGACGTCGACCTCGCCGCACGCAAGGTCGCCTCGGGATTGAACAAACTCGGCATTGCGCAAGGCGATGTGATTTTGCTCCTCCTCCAGAATTCACCCGAATTCGTCTTCGCTTTCCTTGGTGCGTCGTATCGCGGCGCGATTATGACAGCGGCGAATCCTTTCTTCACGGCGGCGGAGATCGCAAAGCAAGCAAAAGGATCGAATGCGAAATTAATCGTGACGCAATCGTCGTATTATGAAAAAGTGAAGGAAATAACAGAGGAATTACCTGATGTTAAAATCATGACCGTCGATTCTCCGCCGGACGGTTGTTTATCATTCGCCGATCTAATTCAGGCCGACGAACGAGAGATGCCGACTGTTGAAATCAATCCGGACGATGTGGTTGCGCTGCCGTATTCCTCTGGAACCACCGGATTGCCAAAAGGAGTGATGCTTACACACAGAGGATTAGTGACGAGTGTGGCTCAGCAAGTGGACGGTGAAAATCCGAATCTGTACTACCGAAATGAGGACGTGATTCTGTGCGTTTTGCCGCTCTTCCATATCTATTCGCTTAATTCCGTCCTCCTCTGCGGATTACGGGCGGGGACCACGATTTTGATTATGCCTAAATTCGAGATCGGTTCGCTTTTGCAATTGGTGCAGAAATTCAAAGTGTCGATTGCGCCGATTGTGCCGCCGATTGTTTTGGCCATCGCGAAGTCGCCGGACCTCGATAAGTACGATCTTTCGTCTATCAGAGTTATCAAATGCGGCGGCGCTCCGCTTGGGAAGGAGCTTGAAGATTCCGTGAGAGCCAAGTTTCCCAAGGCTGTGCTCGGCCAGGGATACGGAATGACGGAGGCCGGTCCAGTGCTAACGATGGGTTTAGCATTTGCAAAGGAGCCATTTCCGATGAAACCGGGCGCCTGTGGCACCGTCGTGAGAAACGCCGAGATGAAGATTGTCGACACCGAAAACGGATGTTCGTTGCCTCGAAATACGCCAGGAGAGATATGCATCAGAGGCGATCAAATCATGAAAGGGTATCTGAACAATCCGGAGGCGACAGCCGCCACAATCGACAAGGATGGGTGGTTGCACACTGGCGACATCGGATTCATCGACGACGACGACGAGCTGTTCATCGTCGATCGATTGAAGGAACTTATAAAGTATAAGGGATTTCAAGTGGCTCCAGCGGAATTGGAAGCTCTGTTGCTCACTCATCCGGCAATCTCTGATGCCGCCGTCGTTCCAATGAAAGATGAAGAAGCCGGAGAGGTTCCAGTTGCATTCGTGGTGAGATTGAAGAACTCTGAAGTAACTGAAGATGAAATTAAACAATTCATATCAAAGCAGGTGGTTTTCTACAAGAGAATCAAGAGGGCGTTTATGATAGACGCAATTCCGAAATCGCCGTCCGGAAAGATCTTGAGGAAGGAGTTGAGGGCAAAGTTGGCAACTGGTTTTCCAATTTCTAATTAA 1641 49.6 MAVEALQNDFIFRSKLPDIYIPNHLPLHSYCLHENLAKIGHRTCLINAVTAESFTYHDVDLAARKVASGLNKLGIAQGDVILLLLQNSPEFVFAFLGASYRGAIMTAANPFFTAAEIAKQAKGSNAKLIVTQSSYYEKVKEITEELPDVKIMTVDSPPDGCLSFADLIQADEREMPTVEINPDDVVALPYSSGTTGLPKGVMLTHRGLVTSVAQQVDGENPNLYYRNEDVILCVLPLFHIYSLNSVLLCGLRAGTTILIMPKFEIGSLLQLVQKFKVSIAPIVPPIVLAIAKSPDLDKYDLSSIRVIKCGGAPLGKELEDSVRAKFPKAVLGQGYGMTEAGPVLTMGLAFAKEPFPMKPGACGTVVRNAEMKIVDTENGCSLPRNTPGEICIRGDQIMKGYLNNPEATAATIDKDGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPAISDAAVVPMKDEEAGEVPVAFVVRLKNSEVTEDEIKQFISKQVVFYKRIKRAFMIDAIPKSPSGKILRKELRAKLATGFPISN 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5470037 5473047 - CmaCh14G010390.1 Cma14g01039 308022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01039 546 CDD 4CL 21 534 - -
Cma14g01039 546 SUPERFAMILY Acetyl-CoA synthetase-like 17 540 - -
Cma14g01039 546 Gene3D - 439 540 IPR045851 -
Cma14g01039 546 Pfam AMP-binding enzyme 37 444 IPR000873 -
Cma14g01039 546 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Cma14g01039 546 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Cma14g01039 546 Gene3D - 5 438 IPR042099 -
Cma14g01039 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 540 - -
Cma14g01039 546 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00666 Cma-Chr5:3423758 Cma14g01039 Cma-Chr14:5470037 0 dispersed
Cma10g00401 Cma-Chr10:1859499 Cma14g01039 Cma-Chr14:5470037 0 dispersed
Cma11g00400 Cma-Chr11:1971997 Cma14g01039 Cma-Chr14:5470037 0 dispersed
Cma01g00200 Cma-Chr1:910054 Cma14g01039 Cma-Chr14:5470037 0 wgd
Cma14g01039 Cma-Chr14:5470037 Cma17g00916 Cma-Chr17:6899532 0 wgd
Cma14g01039 Cma-Chr14:5470037 Cma08g00570 Cma-Chr8:3253231 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01039 K01904 - csv:101215427 956.822