Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01051 ATGGCGGATCTCAAAGAGCGGTTGCTTCCACCGAAACCTTCATCTGCTATTAATCTTAGGGAGACAATTAATAATCGACCATCAGCCTCTGGGAGGGTGCCTTTTCAAGGTGTGGATGTTCTAGGGCTGAAGAAGCGAGGGCAGGGACTTAGATCTTGGATCCGAGTAGATTCCTCTGGGAACTCCCAGATTATTGAGGTTGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCGCGTGATTTACGTTTGCTTGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTGGTCAATCTAGAGCAGATTCGATGCATTATAACAGCTGAAGAAGTTTTGCTATTAAATTCCCTTGATAGCTATGTACTGCAGTATGTGGTAGAGCTACAGAGGCGATTGAAAACCACCGGGGTTGATGAGGTTTGGCAGAATGATGCAAATCATGGAGCTGACTTAAATCGAAGAAGAGGAAGCAGAAATTTCGATAATGTATTTGGAAACACCTCTCCTGATTATTTGCCCTTTGAATTCAGAGCTTTAGAAGTTGCTTTGGAAGCAGCTTGTACATTTCTTGATTCCCAGGCTGCAGAGTTAGAAATCGAAGCATACCCGTTGCTAGATGAACTTACATCCAAAATCAGTACATTAAATTTGGAGCGGGTCCGCCGCTTGAAAAGCAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGACGATGGAGATATGGCAGAAATGTATCTGACTGAGAAGAAAATGAGAATGGAATCCTTTGTTTATGGCGATCAATCTGTTACTGGATACAGATCAATTGATGGAGCATCTTTTTCTGCTCCTGTTTCTCCTGTATCTTCACCACCCGAATCTCGCAAGCTCGAGAAGAGCCTGAGCATTGCCAGGAGCCGGCATGAGAGTACGAGAAGTTCAGAAAGTTCAACTGAAAATATAGAGGAGCTTGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAATAAGTTGACATCGTTGAAGGAATACATCGATGACACAGAAGATTTCATCAACATCCAGCTGGATAATGTACGTAACCAGTTGATCCAGTTTGAGCTGCTACTCACTACTGCAACATTTGTCGTTGCCATTTTTGGGGTGGTAGCTGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGAATCCTGATGCATTCAAATGGGTTCTTCTAATAACAGGAGTAAGTGGAATTATCATATTTTCTGCATTTGTTTGGTTTTTCAGATACAAAAGACTGATGCCACTCTAA 1344 42.26 MADLKERLLPPKPSSAINLRETINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITAEEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDANHGADLNRRRGSRNFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVTGYRSIDGASFSAPVSPVSSPPESRKLEKSLSIARSRHESTRSSESSTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGNPDAFKWVLLITGVSGIIIFSAFVWFFRYKRLMPL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5538346 5541631 + CmaCh14G010510.1 Cma14g01051 308034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01051 447 Gene3D Magnesium transport protein CorA, transmembrane region 125 378 - -
Cma14g01051 447 Gene3D Magnesium transport protein CorA, transmembrane region 385 445 - -
Cma14g01051 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 447 IPR039204 -
Cma14g01051 447 Pfam CorA-like Mg2+ transporter protein 328 435 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cma14g01051 447 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 447 - -
Cma14g01051 447 CDD Mrs2_Mfm1p-like 53 444 IPR039204 -
Cma14g01051 447 MobiDBLite consensus disorder prediction 293 307 - -
Cma14g01051 447 Gene3D - 41 124 - -
Cma14g01051 447 MobiDBLite consensus disorder prediction 309 329 - -
Cma14g01051 447 MobiDBLite consensus disorder prediction 293 329 - -
Cma14g01051 447 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 437 IPR045863 -
Cma14g01051 447 Coils Coil 228 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g01112 Cma-Chr8:6896552 Cma14g01051 Cma-Chr14:5538346 1.40E-123 dispersed
Cma11g01693 Cma-Chr11:11177026 Cma14g01051 Cma-Chr14:5538346 3.44E-116 dispersed
Cma14g01051 Cma-Chr14:5538346 Cma17g00187 Cma-Chr17:979088 6.41E-119 dispersed
Cma01g00188 Cma-Chr1:840566 Cma14g01051 Cma-Chr14:5538346 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01051 K16075 - csv:101217419 800.816