Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01054 ATGGCCGCTGATTCTTCTTGGTTGGATTCTGTTGACACTTCTCTAGATCTCAATCTTCAACCTCTCAGATTCTCCGGCGACGCTCCGAAGGAGAGGAATTACATGGAGGTTGAGAGGAAGGTTTCTGTGAAAGAAGAGACTGGGGCTTTAATGGAGGAATTGAAGAGGGTGAATGCAGAGAACAAGAAATTGACTGAAATGTTGTCTGTTGTGTGTGAAAATTACAACACTTTGAGAGGGCATTTGATGGAACAGATGAACAAAAGTGGAGAAAAGGAGATTTGTTGTTCTTCAAAGAAGAGGAAATCTGAGAGTTCTGAGAGTAGCTCAACTGATGAAGACTCTTTCAAGGAACCAAAACAGGAAACCATTAACAAATCTGCTAAAATCACGACAGTTCAAGTCAAAATTGGAGCTTCTGATTCAAATCTGGTTGTTAAAGATGGATATCAATGGAGGAAATATGGCCAAAAGGTCACTAGAGATAATCCTTGTCCTAGAGCTTATTTCAAATGCTCTTTTGCCCCAACCTGCCCTGTCAAGAAGAAGGTTCAAAGAAGTGTAGAAGATCAATCAGTTCTGGTGGCCACATATGAAGGCGAACATAACCATCCACAGGCATCTCAGATCGAACCCACTTCCGCCCGTTCTGTCAGCATAGCTCCGGCGCCGCTCACGGCAGCTCCGAGATCCTTGTCTGCGCCGCCCAAACCGACGACAGAAGCTAAAACGATTTCCAACCCAAGATTTGACTCGCCGGAAGTGCAAAAGTTTCTCGTCGAACAGATGGCTTCTTCGTTGACAAAAGATCCCAATTTTACGGCGGCGCTAGCGGCGGCGATATCGGGAAAGATTTTCCAACATTAA 867 44.75 MAADSSWLDSVDTSLDLNLQPLRFSGDAPKERNYMEVERKVSVKEETGALMEELKRVNAENKKLTEMLSVVCENYNTLRGHLMEQMNKSGEKEICCSSKKRKSESSESSSTDEDSFKEPKQETINKSAKITTVQVKIGASDSNLVVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPTCPVKKKVQRSVEDQSVLVATYEGEHNHPQASQIEPTSARSVSIAPAPLTAAPRSLSAPPKPTTEAKTISNPRFDSPEVQKFLVEQMASSLTKDPNFTAALAAAISGKIFQH 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5555368 5556989 - CmaCh14G010540.1 Cma14g01054 308037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01054 288 Pfam WRKY DNA -binding domain 147 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma14g01054 288 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 7 287 - -
Cma14g01054 288 ProSiteProfiles WRKY domain profile. 141 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cma14g01054 288 MobiDBLite consensus disorder prediction 93 122 - -
Cma14g01054 288 SUPERFAMILY WRKY DNA-binding domain 144 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cma14g01054 288 MobiDBLite consensus disorder prediction 226 248 - -
Cma14g01054 288 Gene3D WRKY domain 130 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cma14g01054 288 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 7 287 IPR044810 GO:0003700
Cma14g01054 288 SMART WRKY_cls 146 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00185 Cma14g01054 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma05g00351 Cma-Chr5:1548177 Cma14g01054 Cma-Chr14:5555368 1.98E-63 dispersed
Cma09g00413 Cma-Chr9:1760990 Cma14g01054 Cma-Chr14:5555368 3.03E-53 dispersed
Cma12g00364 Cma-Chr12:1860926 Cma14g01054 Cma-Chr14:5555368 3.26E-60 dispersed
Cma14g01054 Cma-Chr14:5555368 Cma04g00508 Cma-Chr4:2585081 1.44E-26 dispersed
Cma01g00185 Cma-Chr1:822636 Cma14g01054 Cma-Chr14:5555368 1.87E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
36262 PF03106 WRKY 5.00E-23 CL0274 Cma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01054 - - cmos:111441612 527.324