Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01055 ATGGCGGGTAAGGCGGCGCCGGCGAGGAATGTTCTGTTTGGAAAATACGAAATGGGTCGGCTATTGGGGAAAGGAACCTTTGCGAAGGTCTACCATGGAAGAAACTTGATGACCCACGACAGTGTCGCCATTAAAGTGATCCTCAAGGACAGGGTAAAGAAAGAGGGACTTCTTGAGCAAGTCCGGCGAGAAATTTCTGTCATGGGGTTGGTTCGTCATCCCCATATAGTGGAATTGAAAGAAGTAATGGCCACGAAATCCAAGGTGTATTTTGTGATGGAATGCGTTAATGGAGGCGAACTGTTTGTTAAATTGTCTCAACAAGGAAAATTGACAGAAGATGGAGGAAGAAAGTACTTTCAACAGCTTCTCTCCGCCGTGGACTTTTGCCACAGCCGTGGTGTCTCTCACCGTGATTTGAAGCCTGAAAATCTCCTTCTCGACGAGAATGGGAATTTGAAGGTATCTGATTTTGGTCTCTCCGCCCTGCCGGAGCAGCTCCGGATCGACGGATTGCTTCACACACGGTGTGGAACACCGGCTTATGTAGCGCCTGAGGTGCTCAGAAAGAGGGGATACGAGGGCGCTAAGTCGGATCTTTGGTCTTGTGGAGTGATTTTGTTTGTGTTGCTTGCTGGGTCTCTGCCATTTAAAGCTGATAATGTGATGAAGTTGTATAGGAAGATTTTCAAGGCGGAGTTTGAGTTTCCTCCTTGGTTTTCTTCAGAAGCTAAGGAAATGGTGTCCAAGCTTCTGGTTGTTGATCCTGAGAAGAGAGCTTCAATGGATGAGATTATGCAGAGTTCTTGGTTTCAAAAGGGCTTCACAAAGCCACTTTCATTCAATGACAAAGATGAATTCAAGAGTGAAATCTCTGAATTGGCGAATCCCAAGATGTTGTCATCTTCTCCTCCTTTCTACAATGCCTTCGAGTTCATTTCCTCAATGTCCTCTGGTTTTGACTTGACTAGTTTGTTTGAAAGCAAGAAGAAACAAGCCTCAATTTTCACTTCAAAATGCTCTGCTTCAGCCATTATAGCCAAGCTTCAGTCTCTAGCGCAGAAGCTGAACTTCAAGGCTACTAATCAGAGGGAGTTCAAGGTGAGACTGCAGGCCATGGAGGAGGGGAGGAAAGGGAAGCTGGCGGTGACGATGGAGGTTTACGAGGTAGCGCCGGAGCTGGCGGTGGTCGAGTTCTCGAAGTCAGCGGGGGACACATTGGAGTACAATAAGTTTTGTGAGAAGGATGTGAGGCCTGCGTTGAAGGACATAGTTTGGAGCTGGCAAGGAGAGAATGAGTGCCTATAA 1308 47.02 MAGKAAPARNVLFGKYEMGRLLGKGTFAKVYHGRNLMTHDSVAIKVILKDRVKKEGLLEQVRREISVMGLVRHPHIVELKEVMATKSKVYFVMECVNGGELFVKLSQQGKLTEDGGRKYFQQLLSAVDFCHSRGVSHRDLKPENLLLDENGNLKVSDFGLSALPEQLRIDGLLHTRCGTPAYVAPEVLRKRGYEGAKSDLWSCGVILFVLLAGSLPFKADNVMKLYRKIFKAEFEFPPWFSSEAKEMVSKLLVVDPEKRASMDEIMQSSWFQKGFTKPLSFNDKDEFKSEISELANPKMLSSSPPFYNAFEFISSMSSGFDLTSLFESKKKQASIFTSKCSASAIIAKLQSLAQKLNFKATNQREFKVRLQAMEEGRKGKLAVTMEVYEVAPELAVVEFSKSAGDTLEYNKFCEKDVRPALKDIVWSWQGENECL 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5577570 5578877 + CmaCh14G010550.1 Cma14g01055 308038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01055 435 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
Cma14g01055 435 PANTHER - 9 434 - -
Cma14g01055 435 Gene3D Transferase(Phosphotransferase) domain 1 96 277 - -
Cma14g01055 435 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 9 434 - -
Cma14g01055 435 ProSitePatterns Protein kinases ATP-binding region signature. 22 54 IPR017441 GO:0005524
Cma14g01055 435 Gene3D Phosphorylase Kinase; domain 1 8 95 - -
Cma14g01055 435 SUPERFAMILY Protein kinase-like (PK-like) 12 283 IPR011009 -
Cma14g01055 435 CDD CIPK_C 308 422 - -
Cma14g01055 435 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01055 435 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01055 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Cma14g01055 435 Gene3D Kinase associated domain 1, KA1 301 427 - -
Cma14g01055 435 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01055 435 Pfam NAF domain 304 360 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g01660 Cma-Chr1:11355900 Cma14g01055 Cma-Chr14:5577570 0 dispersed
Cma14g01055 Cma-Chr14:5577570 Cma10g00478 Cma-Chr10:2169579 1.56E-172 dispersed
Cma14g01055 Cma-Chr14:5577570 Cma09g00414 Cma-Chr9:1766505 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69074 PF00069 Pkinase 1.60E-75 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01055 - - csv:101218600 780.4