Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cma14g01057 | ATGCCGATCGATACCTCTGCAGTTTCCGGCCAAATTGTGTGTGTCACCGGCGCTGGAGGCTTCATTGCTTCTTGGCTTGTAAAGCTTCTTCTTGTAAAGGGCTACACTGTTCGAGGAACTGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGCAATTGGATGGAGCTAATGAGCGTCTGTCTTTGTATAGCGCTGATCTTCTTGATTTTGAAAGCCTCAAAGCAGCTATTATGGGCTGCAATGGTGTCTTCCACACTGCCTCTCCAGTCACCGATGACCCCGAAAAGGTGGAACAAGCCATAATTGGAACTAAGAATGTCATGACCGCCGCAGCGGAAGCAAAAGTTCAACGAGTAGTGTTCACATCGTCCATCGGCACCGTCTACATGAACCCTAACCGTAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGATCTTGACTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCCAAGACAATAGCAGAGCAGGCAGCATGGGCAGTGGCAGAAGAAAAAGGAGTGGATTTAGTAGTGGTGAACCCAATGTTGGTATTGGGGCCTCTATTGCAAGAGGGTGTGAATGCGAGCGTGGTTCACATAATGAAGTACTTAACAGGGTCAGCCAAGACATATGTAAATGCAGTTCAAGGATATGTTGATGTGAAGGATGTGGCGAAAGCCCATGTCTTGGTTTATGAAACTCCTTCAGCTTCAGGCAGATATATATGCGTTGAGAGCATGCTTCATCGTGGAGAATTGGTTGATGTTCTTGCTAAGTTGTTCCCTCAATATCCACTTCCATCCAAGTGTTCAGATGAGGTGAATCCCAGAAAGAAGCCTTATAAATACAGTGTTGAGAAATTGAAGTCATTGGGAATGGAGTTCACACCAATCAAACAATGCATATATGAAACAGTGAAGAGCTTACAAGAAAAGGGTCATCTACCGCTTCCCTCCCAACTTCAGCATTGA | 990 | 45.35 | MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLVKGYTVRGTVRNPDDQKNAHLKQLDGANERLSLYSADLLDFESLKAAIMGCNGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVQRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTIAEQAAWAVAEEKGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDVLAKLFPQYPLPSKCSDEVNPRKKPYKYSVEKLKSLGMEFTPIKQCIYETVKSLQEKGHLPLPSQLQH | 329 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 5613286 | 5614985 | - | CmaCh14G010570.1 | Cma14g01057 | 308040 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cma14g01057 | 329 | CDD | FR_SDR_e | 13 | 298 | - | - | |
| Cma14g01057 | 329 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 8 | 324 | - | - | |
| Cma14g01057 | 329 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 6 | 316 | IPR036291 | - | |
| Cma14g01057 | 329 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 243 | IPR001509 | - | |
| Cma14g01057 | 329 | PANTHER | CINNAMOYL-COA REDUCTASE | 8 | 324 | - | - | |
| Cma14g01057 | 329 | Gene3D | - | 3 | 329 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cma01g00183 | Cma-Chr1:806211 | Cma14g01057 | Cma-Chr14:5613286 | 0 | dispersed | |
| Cma09g00018 | Cma-Chr9:110002 | Cma14g01057 | Cma-Chr14:5613286 | 3.21E-83 | dispersed | |
| Cma14g01057 | Cma-Chr14:5613286 | Cma14g01059 | Cma-Chr14:5644557 | 0 | dispersed | |
| Cma14g01057 | Cma-Chr14:5613286 | Cma14g01058 | Cma-Chr14:5639941 | 0 | tandem | |
| Cma02g01256 | Cma-Chr2:7373999 | Cma14g01057 | Cma-Chr14:5613286 | 3.35E-105 | transposed | |
| Cma13g00044 | Cma-Chr13:430330 | Cma14g01057 | Cma-Chr14:5613286 | 2.75E-96 | transposed | |
| Cma20g00694 | Cma-Chr20:3180653 | Cma14g01057 | Cma-Chr14:5613286 | 1.34E-77 | transposed | |
| Cma01g00182 | Cma-Chr1:802536 | Cma14g01057 | Cma-Chr14:5613286 | 0 | wgd | |
| Cma14g01057 | Cma-Chr14:5613286 | Cma17g00896 | Cma-Chr17:6791765 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cma14g01057 | K09753 | - | csv:116401668 | 615.535 |