Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01112 ATGGAGTTGGTAGCCGAGAAGAAGGATTTTGATTCTGCTAACGACAACAACAAGCTTAACTCTGCTCAAGCAGTTCTTGATTCTTCTTATCCTCCCTCAGTCGCTGCGGATGAAACTGGTAGTAATAACAATTCTAAAGAAGCTGAAGATTTGAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACATCATATGAGGACAACATAAAAAAGATTGTGGACTTTAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCATTACCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCCAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGCCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGGGACCAGCTTGATTTCGGTGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAATGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCTGATCATCAGGCAGTGATGGGTCTGCGAGATTCAATCAAACGACACTTAAAGCTCCCACATGGGTATGTTATGGAATACAAACCTCACGATGCATCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGATCTTGA 735 43.95 MELVAEKKDFDSANDNNKLNSAQAVLDSSYPPSVAADETGSNNNSKEAEDLSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRGS 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8228464 8241578 - CmaCh14G011120.1 Cma14g01112 308095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01112 244 MobiDBLite consensus disorder prediction 1 52 - -
Cma14g01112 244 Pfam Eukaryotic initiation factor 4E 65 223 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cma14g01112 244 ProSitePatterns Eukaryotic initiation factor 4E signature. 121 144 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cma14g01112 244 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 43 243 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cma14g01112 244 PANTHER BNAA10G16710D PROTEIN 43 243 - -
Cma14g01112 244 Gene3D RNA Cap, Translation Initiation Factor Eif4e 35 236 IPR023398 -
Cma14g01112 244 MobiDBLite consensus disorder prediction 15 42 - -
Cma14g01112 244 SUPERFAMILY eIF4e-like 42 239 IPR023398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01112 Cma-Chr14:8228464 Cma17g00145 Cma-Chr17:719790 1.37E-27 dispersed
Cma14g01112 Cma-Chr14:8228464 Cma18g00446 Cma-Chr18:2462683 1.70E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01112 K03259 - csv:101204290 462.225