Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01133 ATGGGTTTCTCTTCGTCTTCTTTTTCAGTTATCAAATGGTTCTCCTTCTGCAGACCTACCTCTTCAATACTTCTTTTTCTATACTGCATCCTCTTCTTCTTTCATACTGAAGCTATTTTGGGCGGTTCAGACAAATCCGTGCTTCTTCAGTTCAAAAATGCTGTTTCCGACCCTTACGGCTTGCTCTCCACCTGGACTTCCAGTTCTTCTGATTACTGCTTGTGGTTCGGCGTTTCGTGCGACCTCAATTCTCGGGTTGTGTCCCTCAACATTTCCGGGAATGGTGGTGCAGGTAATTCGAATGCATTTTCCTGCTCTGACTCTTCTAAATTTCCTCTTTATGGGTTTGGAGTCAGGAGGGGTTGTGTCGGTAATAGAGGCTCACTGATGGGGAAGCTTCCGCCAGTGATTGGGAAGCTCACTGAGCTGAGGACTTTGTCTCTTACGTTTCATGGTTTTGAGGGTGAACTTCCGGGTGAAATCTTGGGATTGGAGAACCTTGAGGTTCTTGATCTTGAAGGAAACTCTTTAACTGGACTGCTTAATAATGATTTTGTCAGGCTGCGCAAGTTGCGCATTCTCAATCTTGGATTTAATAGGCTTACTGGTGAGATTCCTGGCGCGCTTTCTGGTTGTGCAAGTTTAGAGGTCATGAATTTAGCTGGGAATCAGTTGAATGGCACAATTCCACAGTTTGTTGGTCGGTTGAGAGGGGTCTACTTGTCTTTCAATTTTTTTACAGGATCCATTCCAAGTGAGCTTGGGAATAACTGTCAGCTTGAGCATCTTGACCTGTCTGGTAATTTTTTGGTCAGTGGGATTCCAAGTAGTTTGGGGAATTGCGGTCAGTTGCAGACATTGTTGCTGTACTCCAACATGCTGGAGGAGGCCATTCCAGCTGGATTTGGTAAGTTGCAGAAGCTGGAACTGCTTGATCTTTCTAGGAATAGTCTCAGTGGTCCAATACCCTCCGAGCTCGGAAACTGCTTGCAGTTGTCTGTCCTTGTGCTCTCGAATCTCTTTGATCCAATTCCCAAGATCAACTACACAGACAAAGACTCCCCAACTGAGGAACTTAGTGATGATAGTTTTAACTATTTTTCCGGCAGTATACCTGAGTCGATTACAACCCTTCCAAAGCTGAGGATATTGTGGGCCCCTAGTGCAAACCTTAATGGAAGATTCCCTTCCCAATGGGGTAAGTGTGAAAACTTGGAGATGGTCAACTTAGCTGGTAATTATCTTTACGGGGAGCTTCCAAGTGGATTTAGCGTCTGCAAAAAAATTCAAGTTCTTGATTTAAGCATGAACCGGCTTTCTGGAGAACTTGATAAAAACCTTCCTTTTCCTTACATGAATCTGTTTGATATTAGCGGTAATCTCTTAACTGGTGAGATTCCTATGGTCTGTGGCCAAGATTGCTCACTGCCAATATCCCATTCAAACAGATATTTGGATGTTGATGACGTGTCGTCTCGGTATCTTGCATTTTTTGCCACTAGTATTCGAGGTGCAACGCCTTTTACATTTCTTGGAAATGATGATCTGATAATGCATAACTTTGGGGACAATAACTTTACTGGCAGTCTTCTGTCGTTACCATTTCCACGTGAAAGAATGGGAAGAAAAACTGTTTATGCTTATCTTGTAGGTGGAAATAAGCTGACTGGACGATTTCCTGATAGTTTATTTGAAATATGCGATGGTTTGGCGGGATTGATCTTCAATATTAGCAGCAATAAAATCTCTGGTCCGTTTTCTGTGGAAATTGGTAAAAAGTGTGGTTCTCTCAAATTCTTGGATGCATCTGGTAATCAGATGACTGGGCAGGTACCTGCTAGCTTTGGAGAGCTATTATCTCTGAATCACCTCAACCTAAGCAGGAACAAGTTTCAGTATGAAATACCAACTTCTCTCGGACATATAGCTGATTTGAAGTACCTTTGTTTGGCTGGCAATAACTTTAATGGTTCTATACCTTCTACATTGGGAAAGTTGCAGTCTTTGGAGTTGCTGGATCTTTCACATAATGATCTTTCGGGTGAAATTCCAGTCGATCTTGTTAACTTGAGAGGCTTAAAAGTTCTACTTCTCAATAATAATTCACTCTCTGGACCGGTCCCCTCTGGTTTGGCAAATGTTACCACACTCTCTGCATTCAATGTGTCATTCAATAACTTGTCTGGTTCCTTACCATCAAATAATAACATGATCAAATGTAGTGGTGCGATTGGAAATCCTTACCTCCGCCCGTGCCATTTGTTTTCTCTGGCCGTGCCCTCATCTGGAATGCAAGGTTCAGAAGGTGACCCGAGTAGTCTTGCAGCTTCACCATCTGGTGTTGCACCCCAAACAAGTGGAGGTGGCAGCTTCAATTCAATTGAGATAGCATCCATTACGTCTGCCTCTGCCATTGTTTCTGTTCTTATTGCTCTGATTATCCTTTTTATATATACACGAAAGTGGAACACGAAGTCTAAAGTTCTTGGATCAATGAGAAAGGAAGTGACGGTTTTTACTGATATTGGGGTTTCCCTGACGTTTGATAATGTAGTGCGTGCCACAAGTAATTTCAATGCAAGCAATTGCATTGGAAGTGGAGGATTTGGGGCAACTTACAAGGCAGAGATCGCATTGGGGGTGCTCGTTGCAATAAAACGACTTGCTGTAGGTCGATTTCAAGGGGTCCAACAGTTTGATGCAGAAATTAAAACTCTTGGAAGGCTGCGCCATCCGAACCTTGTCACCTTAATTGGTTACCATGCCAGTGAAACAGAGATGTTCCTGATATATAATTATTTGCCAGGAGGCAATTTGGAAAAATTCATCCAGGAGAGGTCTACAAGAGCAGTTGATTGGAGAATTCTTCACAAGATTGCGCTGGACATAGCCCGTGCACTTGCATATCTTCATGATCAGTGTGTACCACGAGTCCTCCACCGCGATGTGAAACCGAGCAATATACTATTAGACGATGATTTCAATGCTTATCTCTCTGACTTTGGATTGGCCAGGCTTCTTGGGACTTCTGAAACCCATGCTACCACAGGTGTGGCTGGAACTTTCGGCTATGTCGCTCCTGAATATGCCATGACGTGTCGTGTCTCTGATAAAGCAGACGTGTACAGTTATGGCGTGGTTCTTCTCGAGCTACTCTCGGACAAGAAAGCACTAGATCCCTCATTTTCCTCGTACGGTAATGGTTTTAACATAGTAGCTTGGGCGTGTATGCTGCTTCGGCAGGGGCGAGCCAAGGAATTCTTCACAGCAGGGTTGTGGGAGGTAGGTCCCCATGATGATTTGGTTGAAGTATTACACTTGGCAGTTGTTTGTACAGTGGACTCTTTGTCGACTAGGCCAACGATGAAACTAGTCGTACGAAGGCTTAAGCAGCTTCAACCGCCATCGTGTTAG 3414 43.76 MGFSSSSFSVIKWFSFCRPTSSILLFLYCILFFFHTEAILGGSDKSVLLQFKNAVSDPYGLLSTWTSSSSDYCLWFGVSCDLNSRVVSLNISGNGGAGNSNAFSCSDSSKFPLYGFGVRRGCVGNRGSLMGKLPPVIGKLTELRTLSLTFHGFEGELPGEILGLENLEVLDLEGNSLTGLLNNDFVRLRKLRILNLGFNRLTGEIPGALSGCASLEVMNLAGNQLNGTIPQFVGRLRGVYLSFNFFTGSIPSELGNNCQLEHLDLSGNFLVSGIPSSLGNCGQLQTLLLYSNMLEEAIPAGFGKLQKLELLDLSRNSLSGPIPSELGNCLQLSVLVLSNLFDPIPKINYTDKDSPTEELSDDSFNYFSGSIPESITTLPKLRILWAPSANLNGRFPSQWGKCENLEMVNLAGNYLYGELPSGFSVCKKIQVLDLSMNRLSGELDKNLPFPYMNLFDISGNLLTGEIPMVCGQDCSLPISHSNRYLDVDDVSSRYLAFFATSIRGATPFTFLGNDDLIMHNFGDNNFTGSLLSLPFPRERMGRKTVYAYLVGGNKLTGRFPDSLFEICDGLAGLIFNISSNKISGPFSVEIGKKCGSLKFLDASGNQMTGQVPASFGELLSLNHLNLSRNKFQYEIPTSLGHIADLKYLCLAGNNFNGSIPSTLGKLQSLELLDLSHNDLSGEIPVDLVNLRGLKVLLLNNNSLSGPVPSGLANVTTLSAFNVSFNNLSGSLPSNNNMIKCSGAIGNPYLRPCHLFSLAVPSSGMQGSEGDPSSLAASPSGVAPQTSGGGSFNSIEIASITSASAIVSVLIALIILFIYTRKWNTKSKVLGSMRKEVTVFTDIGVSLTFDNVVRATSNFNASNCIGSGGFGATYKAEIALGVLVAIKRLAVGRFQGVQQFDAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGRAKEFFTAGLWEVGPHDDLVEVLHLAVVCTVDSLSTRPTMKLVVRRLKQLQPPSC 1137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8725070 8728483 + CmaCh14G011330.1 Cma14g01133 308116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01133 1137 ProSiteProfiles Leucine-rich repeat profile. 668 691 IPR001611 GO:0005515
Cma14g01133 1137 Gene3D Phosphorylase Kinase; domain 1 819 933 - -
Cma14g01133 1137 Gene3D Ribonuclease Inhibitor 42 236 IPR032675 -
Cma14g01133 1137 ProSiteProfiles Protein kinase domain profile. 858 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01133 1137 ProSitePatterns Protein kinases ATP-binding region signature. 864 886 IPR017441 GO:0005524
Cma14g01133 1137 SUPERFAMILY RNI-like 130 467 - -
Cma14g01133 1137 PRINTS Leucine-rich repeat signature 308 321 - -
Cma14g01133 1137 PRINTS Leucine-rich repeat signature 666 679 - -
Cma14g01133 1137 Pfam Leucine Rich Repeat 259 281 IPR001611 GO:0005515
Cma14g01133 1137 Pfam Leucine Rich Repeat 307 329 IPR001611 GO:0005515
Cma14g01133 1137 Gene3D Ribonuclease Inhibitor 493 756 IPR032675 -
Cma14g01133 1137 Gene3D Ribonuclease Inhibitor 237 359 IPR032675 -
Cma14g01133 1137 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 1136 - -
Cma14g01133 1137 CDD STKc_IRAK 864 1132 - -
Cma14g01133 1137 SMART LRR_typ_2 618 642 IPR003591 -
Cma14g01133 1137 SMART LRR_typ_2 164 187 IPR003591 -
Cma14g01133 1137 SMART LRR_typ_2 188 212 IPR003591 -
Cma14g01133 1137 SMART LRR_typ_2 258 281 IPR003591 -
Cma14g01133 1137 SMART LRR_typ_2 305 329 IPR003591 -
Cma14g01133 1137 SMART LRR_typ_2 666 690 IPR003591 -
Cma14g01133 1137 SUPERFAMILY RNI-like 364 733 - -
Cma14g01133 1137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 978 990 IPR008271 GO:0004672|GO:0006468
Cma14g01133 1137 SMART serkin_6 858 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01133 1137 Pfam Leucine rich repeat N-terminal domain 43 81 IPR013210 -
Cma14g01133 1137 SUPERFAMILY Protein kinase-like (PK-like) 843 1129 IPR011009 -
Cma14g01133 1137 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 22 1136 - -
Cma14g01133 1137 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Cma14g01133 1137 Gene3D Ribonuclease Inhibitor 360 475 IPR032675 -
Cma14g01133 1137 Gene3D Transferase(Phosphotransferase) domain 1 934 1134 - -
Cma14g01133 1137 Pfam Protein kinase domain 861 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01133 Cma-Chr14:8725070 Cma15g00806 Cma-Chr15:4068916 0 dispersed
Cma01g00445 Cma-Chr1:2235998 Cma14g01133 Cma-Chr14:8725070 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69078 PF00069 Pkinase 7.90E-43 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01133 - - csv:101218045 1904.03