Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01158 ATGGCTGTACCCATTTACCGATTACCCTCTTTCTTTCCACTTCTCGCCATATTTTTTGCCTTCTCCACCTTCCTTGCTTCCACAGAAGCATATGACCCACTTGATCCAAATGGAAACATTACTGTCAAATGGGATGTTATAAACTGGACTCCTGATGGCTATGTTGCTGTGGTTACTCTGTACAATTTCCAACAATATCGTCATATTCAAGCACCGGGATGGTCTCTGCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAGCATGTTGGGGGGCCAAACAACAGAGCAAGGTGATTGCTCTAGATATAAAGGCAACATCCCTCATTGCTGCAAGAGGGATCCAACCATTGTCGATTTACTGCCCGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAAAGGTGGAGTTCTCAACTCCTGGGTGCAAGATCCTGTTACTGCAGTGAGCTCATTTCAGCTCAGTGTTGGTGCTGCTGGAACCTCGAATAAAACTGTTCGTCTGCCGAAGAACTTCACCCTAAAAGCACCTGGGCCTGGTTATACTTGTGGACCGGCAAAAATCGTTAAACCGAGCAAATTCATTTCAGCTGACAAACGGAGAGTTACACAGGCCTTGATGACATGGAATGTTACGTGCACATATTCGCAATTTCTGGCTCAAAAAACTCCGACTTGCTGTGTTTCACTGTCGTCGTTTTACAATGATACAATTGTTTCTTGCCCAAAATGCTCCTGTGGCTGCCAAAGCAACTTGAATGATCCCCAAAGTTGTGTGGAGCCAAATTCTCCACACTTGGCCTCCGTTGTTACGGGTGCTAGTTCTCGTTCTAGCAAGAACAATGTGGCACCTTTGGTTCAGTGTACCAGCCACATGTGCCCCATCCGAGTTCACTGGCATGTGAAGATCAACTATAAGGAGTACTGGCGTGTGAAGATCACGATTACAAATTTCAATTACGTGATGAACTATACAAATTGGAACTTAGTTGTCCAACATCCTAACTTCGACAATCTTACTCAGATTTTCAGCTTCAACTACAAGTCGATCAATCCATACGGAACAATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAATGATTTGCTCATGCAAGCAGGCCCGCTTGGCAACGTGCAGACGGAGTTACTTTTCCAGAAGGATCAATCGACTTTCACATTCGATAAGGGCTGGGCTTTCCCTCGAAGGATCTATTTCAATGGTGACAATTGTGTTATGCCTCCTCCAGAGGCCTATCCCTACTTACCGAACACAGGTTCTAAGCACGGTGTCACGATGTTTACTATGTTGTTGCTGATTTCCTTGACTCTATTGTCCTTCCACCATTTGCTTACATAA 1368 44.66 MAVPIYRLPSFFPLLAIFFAFSTFLASTEAYDPLDPNGNITVKWDVINWTPDGYVAVVTLYNFQQYRHIQAPGWSLQWKWAKKEVIWSMLGGQTTEQGDCSRYKGNIPHCCKRDPTIVDLLPGTPYNQQIANCCKGGVLNSWVQDPVTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFISADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCQSNLNDPQSCVEPNSPHLASVVTGASSRSSKNNVAPLVQCTSHMCPIRVHWHVKINYKEYWRVKITITNFNYVMNYTNWNLVVQHPNFDNLTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFQKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPEAYPYLPNTGSKHGVTMFTMLLLISLTLLSFHHLLT 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9168574 9172061 - CmaCh14G011580.1 Cma14g01158 308141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01158 455 PANTHER COBRA-LIKE PROTEIN 9 451 - -
Cma14g01158 455 PIRSF COBRA 5 454 IPR006918 GO:0010215|GO:0031225
Cma14g01158 455 PANTHER PROTEIN COBRA 9 451 IPR006918 GO:0010215|GO:0031225
Cma14g01158 455 Pfam COBRA-like protein 54 217 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma11g01571 Cma14g01158 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma11g00218 Cma-Chr11:1105995 Cma14g01158 Cma-Chr14:9168574 0 dispersed
Cma11g00220 Cma-Chr11:1109507 Cma14g01158 Cma-Chr14:9168574 0 dispersed
Cma14g01158 Cma-Chr14:9168574 Cma19g00723 Cma-Chr19:7310841 8.54E-88 dispersed
Cma01g00420 Cma-Chr1:2113623 Cma14g01158 Cma-Chr14:9168574 0 wgd
Cma13g01062 Cma-Chr13:8051454 Cma14g01158 Cma-Chr14:9168574 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01158 - - cmos:111457618 919.457