Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01176 ATGACCAACAACTTCTCTACCTCTCTTCTTCTCACAATCTTCTTCTACATCTCTCCATCTCTTAGCACATACAAAGATTGCTCCCTCGTGTTCAATTGTGGGAAGATCGCTGACGTTGGCTTCCCTTTCTGGGGCGAAGATCGTCCGCCAAGCTGCGGAGTTCCTAAATTGAAACTCACCTGTAAAGATAATATCGCCGGGATCGAGATGATGCAAGTGAAATATAGGGTGTTGCAGGTGGATCCGAGTAAAAAAACGCTCAAGATGGCGCGAGACGACTATTTGGACGGCATCTGCCCAGAAACTCGTCTGAAGAACACGACCCTGAACCCAAATCTCTTCGAAATGGGGGATGGGTACGTGAATCTAACACTGCTTTATGGGTGCAATTCACCTCTTATGGTGGTTCCTGACCATTTGAGATTCTCGTGTCCCGTCCATGGAGATGGGTGCGTGAACCTTGGGGAGGAAATGGGGCTATGGGGCTGCAAGGACAGCGTTGTGGTTCCTGTTCGTGGCGATGAGGGGCTTTTGGTTGGAGTTTCCAAGATGGAAGAAGCCATTAAAGAAGGGTTTGAGGTGAAATGGAAGGTGGATAGCGGTGGTTGTGGTGGCGAGTGTGTGGAGTCCGGTGGCGTTTGTGGTTATGATTTGAAGCTCCGCCGTGGGATATGTTTCTGTGAGAATGGTGTTTCTTCTTCTTCTTCTTCTTCAGCAGATGTTTGCCGGAAGGACGGTGGTGCCTCCGTCCACCAGGCGTCAGGCTCTGCAGCCAAGACAGGTGGGAGTGAATCCAAGAAAAAACACATAATAATAGGCCTTTGTGTTGGAGGGGCAACTGCATTAGGCTTATGCCTAGGATGCTTTGTCTTCTGCATTACACGACGAAATAAAAAACATGTTCATCCCAAGTTGAAAAGCAAGGATCTTGCTTCGCCTCCTTCAACTGCACCCATTCTGATTCCCTCCACGTTTCGCTCTAATATCATTCCTTCCTATCCTTATTCGAGATCCGATCTCGAGAACGGAAGCTCCTACTTCGGAGCTCAACTCTTTACCTATGATGAACTTGAGGAAGCAACTCATAATTTTGATCCTTCAAAGGAGCTTGGAGATGGAGGTTATGGTACTGTTTACTTTGGAACACTTAAAGATGGACGGATGGTTGCAGTAAAGCGTCTATACGAAAACAACTATAAACGTGTTGAACAATTCATGAACGAAGTCGAGATTCTCTCACGATTGCAACACCCGAACCTCGTGAAGCTTTACGGATGCACATCTAGACATAGTCGAGAGCTCCTCCTAGTATATGAGTACATTCCCAATGGAACAGTGGCTGACCATCTACATGGAAAACAAGCAAATTCAGGTCAGCTCAATTTGGCTGTTAGGCTAAAGATTGCCATAGAGACGGCTAATGCACTAGCTTACCTCCATCGCCAAGACATCATTCACCGCGATGTCAAAACCAACAACATTCTTCTAGACAACAACTTCAAAGTAAAAGTGGCTGATTTCGGGCTCTCACGGTTATTTCCCCTCGATGTAACCCATGTTTCAACTGCTCCACAAGGGACACCAGGCTATGTTGATCCCGAGTATTATCAGTGCTATCAACTAACCTGTAAGAGTGATGTGTATAGCTTTGGAGTCGTTTTGATTGAGCTGATATCGTCGCTGCAGGCAGTTGATATCAACAGGAATAGAAATGATATCAATTTGTCGAATATGGCTATTGATAGAATTCAAAAGCATAGTTTGGGTGATTTAGTAGATCCGGATCTTGGGTTTGAGAGGGATTATGTTGTAAGGTCTATGATAATGTCGGTGGCTGAGTTGGGCTATCGATGTCTTCAACAAACAAGGGATGTGAGGCCTTCTATGGATGAAGTGCTGCAAGCTCTGAGAGAAATAGGGAAAGAAGTGCTAGACATTGGTAATGATATGTGA 1953 45.67 MTNNFSTSLLLTIFFYISPSLSTYKDCSLVFNCGKIADVGFPFWGEDRPPSCGVPKLKLTCKDNIAGIEMMQVKYRVLQVDPSKKTLKMARDDYLDGICPETRLKNTTLNPNLFEMGDGYVNLTLLYGCNSPLMVVPDHLRFSCPVHGDGCVNLGEEMGLWGCKDSVVVPVRGDEGLLVGVSKMEEAIKEGFEVKWKVDSGGCGGECVESGGVCGYDLKLRRGICFCENGVSSSSSSSADVCRKDGGASVHQASGSAAKTGGSESKKKHIIIGLCVGGATALGLCLGCFVFCITRRNKKHVHPKLKSKDLASPPSTAPILIPSTFRSNIIPSYPYSRSDLENGSSYFGAQLFTYDELEEATHNFDPSKELGDGGYGTVYFGTLKDGRMVAVKRLYENNYKRVEQFMNEVEILSRLQHPNLVKLYGCTSRHSRELLLVYEYIPNGTVADHLHGKQANSGQLNLAVRLKIAIETANALAYLHRQDIIHRDVKTNNILLDNNFKVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYYQCYQLTCKSDVYSFGVVLIELISSLQAVDINRNRNDINLSNMAIDRIQKHSLGDLVDPDLGFERDYVVRSMIMSVAELGYRCLQQTRDVRPSMDEVLQALREIGKEVLDIGNDM 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9379243 9382994 + CmaCh14G011760.1 Cma14g01176 308159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01176 650 Pfam Protein kinase domain 367 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01176 650 Gene3D Phosphorylase Kinase; domain 1 338 440 - -
Cma14g01176 650 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Cma14g01176 650 Pfam Wall-associated receptor kinase C-terminal 162 229 IPR032872 -
Cma14g01176 650 PANTHER - 10 644 - -
Cma14g01176 650 SUPERFAMILY Protein kinase-like (PK-like) 345 639 IPR011009 -
Cma14g01176 650 SMART serkin_6 364 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01176 650 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 644 IPR044652 -
Cma14g01176 650 Gene3D Transferase(Phosphotransferase) domain 1 441 644 - -
Cma14g01176 650 Pfam Wall-associated receptor kinase galacturonan-binding 27 90 IPR025287 GO:0030247
Cma14g01176 650 ProSiteProfiles Protein kinase domain profile. 364 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01176 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00494 Cma14g01176 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00308 Cma-Chr10:1393265 Cma14g01176 Cma-Chr14:9379243 2.73E-164 dispersed
Cma11g00286 Cma-Chr11:1425816 Cma14g01176 Cma-Chr14:9379243 6.68E-168 dispersed
Cma13g01013 Cma-Chr13:7795485 Cma14g01176 Cma-Chr14:9379243 1.82E-176 dispersed
Cma14g01176 Cma-Chr14:9379243 Cma15g00054 Cma-Chr15:282771 0 dispersed
Cma14g01176 Cma-Chr14:9379243 Cma01g00400 Cma-Chr1:2027839 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69081 PF00069 Pkinase 2.20E-48 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01176 - - cmax:111479894 1291.95