Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01199 ATGGAGCCGTCTTATCAACTTTCACAAGCGCCTGAGGAGATTATTCTACGCTGGGACTCAGCTGCGCCGGAGGAACTGAAGGATAAGATGATTTTTGACTCCGATAGGGAAGAGATCGACCGATACTTGCAGGCCGTCGATGAAATCCAGAGGTCTATGTCGTCGGCTTCCATTTCCGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCCATGGCCAGGCTTGAGGATGAGTTCCGTTACATTCTGTCTATTCATACCACTCCAATCGAGGTTGAGTCGCTTACTGATCCGAGTTCCTCTTCTCGCTCCATGTCCACTACTGAGAGTTGTGTATTCGAGGATGAAAACGATGAGGAAGCGGATTCGCATGAAGTTCAGCTTGATTTAAGTAGCAGTAGCAGTCCAAGGTTTGGGTCAAGTGGCCGATCGAGCTATCGGGCGATGAGTAGTATTCGTGAAATTGATCTGATACCTTCGGATGCGATTATCGATCTACGAAGTATTGCTGAGCGGATGATTACGGTGGGGTACCTGCGCGAGTGCATCCAAGTCTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGTCTCGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGCTAGATTGGAATGAGCTGGAGATGAAGATCAGAAGGTGGATTAAAGCAGCAAAGGTTTCTATTAGGACCTTGTTTGCCAGTGAGAAGAAGCTCTGCGAGCAAATCTTTTATGGCATAGGGACCGCCATAGACGATGCTTGTTTTATGGAGACTGTAAAGGGTCCCGTGGTTCAGTTGTTCAATTTCGCCGAAGCGATCAGTATAAGCCGCAGATCGCCTGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTAACGGATTTGATACCCGACATCGATGTGATATTCGATTCAAAATCAGCGGAATATATTCGGATTCAGACGGCGGAGATATTGTCGCGGTTGGCGGAGGCCGTCAGAGGGACTTTGTCGGAGTTTGAAAACGCGGTGATGCGAGATCCGTCTCTGCAGCCGGTTCCCGGTGGGACGCTTCATCCGTTGACAAGGTATGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACGTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCACAACCCCAGATATGGACTTCGCTGAGCTAGAGGGTAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGGTTCTGCAGTTCAATTTGGAGGGAAAGTCCAGGCACTACAGAGACCCTTCTCTAGCTCACCTATTCATTATGAACAACGTTCATTACATTGTTCAGAAGATAAAATTATCCCCAGAATTGCGAGAAATGATCGGAGATGTTTATCTGAAAAGGCTGACCGGGAAGTTCCGACGGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGTGGGCGGGAGCTTGTCTTCCGGACCCGCAAAGAGCCTTATTAGAGAAAGATTCAAGACTTTCAATGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGACTCTCAGCTGAGGGAGGAGCTTCGCATATCCATAACTGAAAAGTTGATCCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAAGCACCCGGAAAATTACATCAAGTACTCGGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCAGTAACCCATAACTTGAGAAGGAGATCCCACTGA 1839 48.56 MEPSYQLSQAPEEIILRWDSAAPEELKDKMIFDSDREEIDRYLQAVDEIQRSMSSASISDDQNKVDSTMQIAMARLEDEFRYILSIHTTPIEVESLTDPSSSSRSMSTTESCVFEDENDEEADSHEVQLDLSSSSSPRFGSSGRSSYRAMSSIREIDLIPSDAIIDLRSIAERMITVGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELEMKIRRWIKAAKVSIRTLFASEKKLCEQIFYGIGTAIDDACFMETVKGPVVQLFNFAEAISISRRSPEKLFKILDLHDALTDLIPDIDVIFDSKSAEYIRIQTAEILSRLAEAVRGTLSEFENAVMRDPSLQPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFAELEGKTPLALHLIWSIVVLQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKLSPELREMIGDVYLKRLTGKFRRAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRERFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9583679 9585517 - CmaCh14G011990.1 Cma14g01199 308182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01199 612 Gene3D Exocyst complex component Exo70 113 608 - -
Cma14g01199 612 Pfam Exo70 exocyst complex subunit 226 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cma14g01199 612 MobiDBLite consensus disorder prediction 128 145 - -
Cma14g01199 612 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 611 IPR004140 GO:0000145|GO:0006887
Cma14g01199 612 MobiDBLite consensus disorder prediction 94 145 - -
Cma14g01199 612 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 611 - -
Cma14g01199 612 MobiDBLite consensus disorder prediction 94 112 - -
Cma14g01199 612 SUPERFAMILY Cullin repeat-like 36 599 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma07g00959 Cma-Chr7:4628775 Cma14g01199 Cma-Chr14:9583679 8.36E-07 dispersed
Cma10g00065 Cma-Chr10:249523 Cma14g01199 Cma-Chr14:9583679 6.29E-149 dispersed
Cma13g00158 Cma-Chr13:1194052 Cma14g01199 Cma-Chr14:9583679 3.45E-102 dispersed
Cma13g00803 Cma-Chr13:6823642 Cma14g01199 Cma-Chr14:9583679 6.69E-152 dispersed
Cma14g00174 Cma-Chr14:721043 Cma14g01199 Cma-Chr14:9583679 2.12E-94 dispersed
Cma14g01199 Cma-Chr14:9583679 Cma18g00319 Cma-Chr18:1702191 9.89E-150 dispersed
Cma14g01199 Cma-Chr14:9583679 Cma01g00010 Cma-Chr1:32956 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01199 K07195 - csv:101204229 1091.64