Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01226 ATGGAGAAGAAATGGAGCTGGGGAGAGCTGTTGCTGCTAATCAGTATCTGCATTTTGGGATGGAGGGTCAGTTTTATCAATGGAGCTACGGATCCAGGAGATGTCTCTGCTCTAAATGCCATGTATAGTAGTTTAAACTCGCCTCCAATTCTAACACTATGGAGTTCAAGTGGTGGCGATCCATGTGGACAAATTTGGAAAGGCATTACTTGTTCAGGCTCAAGGATCACTGAAATTTCATTGACTGGTTTAGGACTTTCTGGATCATTGGGATACCAGCTCTCAAGTTTGGCATCTCTAATTAATCTAGATGTGAGTTCCAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTAAATCTTGGATGGAATAACTTCAGTGGAAGCATCCCGTATTCTCTTTCTCAAATGAGTTTGCTTATTTCCTTGAACATCAGCCACAATCAACTTGGGAATCAAGTGAATGATATGTTTTGGAAGCTTTCTTCCTTGGCCATGTTGGATGTCTCTTTCAATTCTCTGTCAGGTGCCCTTCCCCAGAGTTTTAGCAACCTTACCAGTATGAATGCAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTACAAATCTTCCACTACAAAATTTGAATGTCGAGAACAATCATTTTACAGGATGGGTTCCTGAACGATTGAAGAACATAAATATTCAGGAGGGTGGCAATTCTTGGAGCTTTGGGCTTGCACCCCCACCTCCACCTGGTACACCTCCAGCCAACCAAGATTACAGATATCATAAGCCGGGAAATATTTACAGCCCACTGAGTAGTCATGCTGCTGGTGGAGATAGCAGATCAGGTATCAGTGGTGGTGCCCTTGCTGGAATTGTTATATCTGTGCTAGTGGTGGGAGCAGTAATAGCATACATGCTTGTAAAGAGAAGATCCAAAAGGTCTTCCTCAGACATAGACAAGCAAAAGCTTGGGAACTTGCCTATCGTATCTCCTGCTTCAAATGGAGTGCAAGATCCGTTGGCAGAGATGAAGCTTGTTCATACTTCATCATCATTTGATGCAAAATCATTGGATTCTCCTGCTTCAATCAATCTTAAGCCCCCACCTACTGATTCTCATAAATCATTCGATGACAATGATACATCAAAGATACCTGTAGTGAAGAAGACCATTGTCACCCCTCCGATAAGTGTGAAGTCTTATTCAATAGCAGATCTTCAAATGGCTACGGGCAGTTTCGATGTAGAAAACCTTCTCGGTGAGGGATCACTTGGACGTGTTTATCGGGCTCAGTTTGATGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCTGCCTTCCCTAGAGGATTGTTGGAAGATTTCACAGAGATAATTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCGGAGCATGGCCTGCATTTGCTAATATATGAGTTCCATAAGAATGGCTCGCTACATGACTTTTTGCACATATCAGATGAATATAGCAAGCCACTGACCTGGAACTCCCGTGTCAAGATTGCTTTGGGGACGGCTCGTGCATTAGAGTACCTGCATGAAGTTTGTGAACCGTCAGTTGTTCACAGAAATATTAAGTCAGCCAATATCTTATTAGATGCTGAAATTAATCCTCATCTCTCTGATTGTGGCCTGGCTAGCTTTATAACCAATCTTGATCAGGCATTAGATCACCAGGTAGGATCTGGGTACAATGCCCCTGAGGTTACCATGTCGGGTCAATATATATTGAAGAGCGATGTATACAGCTTTGGAGTGGTTATGTTGGAACTTCTAAGTGGGCGTAAGCCATTTGATAGTTCAAGGCCAAGAGATGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGACATCGATGCCTTGACGAAAATGGTTGATCCTGCTCTTAAAGGACTCTACCCAGTCAAGTCTCTCTCGAGATTTGCAGACGTTGTGGCTCTTTGCGTCCAGCCGGAGCCTGAATTTAGACCACCTATGTCAGAGGTGGTGGAGTCATTGGTTCGGCTTGTGCAGAGATCCAACATGAGCCGAAGAACGTTTGGAAGTGATCATGGATCATCCTTTAGAACTGATGATCCTGATGCACGAGAGACATCTTAA 2178 43.3 MEKKWSWGELLLLISICILGWRVSFINGATDPGDVSALNAMYSSLNSPPILTLWSSSGGDPCGQIWKGITCSGSRITEISLTGLGLSGSLGYQLSSLASLINLDVSSNNLGPDIPYQLPQNLQKLNLGWNNFSGSIPYSLSQMSLLISLNISHNQLGNQVNDMFWKLSSLAMLDVSFNSLSGALPQSFSNLTSMNAMFLQNNQFSGTIDVLTNLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPPANQDYRYHKPGNIYSPLSSHAAGGDSRSGISGGALAGIVISVLVVGAVIAYMLVKRRSKRSSSDIDKQKLGNLPIVSPASNGVQDPLAEMKLVHTSSSFDAKSLDSPASINLKPPPTDSHKSFDDNDTSKIPVVKKTIVTPPISVKSYSIADLQMATGSFDVENLLGEGSLGRVYRAQFDDGKVLAVKKIDSAAFPRGLLEDFTEIIANVSQLHHPNVTELMGYCSEHGLHLLIYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCEPSVVHRNIKSANILLDAEINPHLSDCGLASFITNLDQALDHQVGSGYNAPEVTMSGQYILKSDVYSFGVVMLELLSGRKPFDSSRPRDEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVESLVRLVQRSNMSRRTFGSDHGSSFRTDDPDARETS 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9734658 9741357 - CmaCh14G012260.1 Cma14g01226 308209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01226 725 Gene3D Phosphorylase Kinase; domain 1 381 497 - -
Cma14g01226 725 PANTHER OS01G0253100 PROTEIN 20 721 IPR045271 GO:0004714|GO:0006468
Cma14g01226 725 MobiDBLite consensus disorder prediction 710 725 - -
Cma14g01226 725 MobiDBLite consensus disorder prediction 703 725 - -
Cma14g01226 725 Gene3D Transferase(Phosphotransferase) domain 1 499 715 - -
Cma14g01226 725 MobiDBLite consensus disorder prediction 245 269 - -
Cma14g01226 725 Gene3D Ribonuclease Inhibitor 31 249 IPR032675 -
Cma14g01226 725 CDD STKc_IRAK 426 695 - -
Cma14g01226 725 Pfam Protein tyrosine and serine/threonine kinase 422 692 IPR001245 GO:0004672|GO:0006468
Cma14g01226 725 MobiDBLite consensus disorder prediction 364 386 - -
Cma14g01226 725 SUPERFAMILY L domain-like 30 236 - -
Cma14g01226 725 ProSiteProfiles Protein kinase domain profile. 420 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01226 725 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 20 721 - -
Cma14g01226 725 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Cma14g01226 725 SUPERFAMILY Protein kinase-like (PK-like) 400 692 IPR011009 -
Cma14g01226 725 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma03g00479 Cma-Chr3:4813485 Cma14g01226 Cma-Chr14:9734658 7.69E-172 dispersed
Cma04g00965 Cma-Chr4:4949158 Cma14g01226 Cma-Chr14:9734658 0 dispersed
Cma13g00416 Cma-Chr13:4703820 Cma14g01226 Cma-Chr14:9734658 0 dispersed
Cma14g01226 Cma-Chr14:9734658 Cma15g01427 Cma-Chr15:9019149 0 dispersed
Cma01g00022 Cma-Chr1:86530 Cma14g01226 Cma-Chr14:9734658 0 wgd
Cma14g01226 Cma-Chr14:9734658 Cma17g00644 Cma-Chr17:5444729 0 wgd
Cma14g01226 Cma-Chr14:9734658 Cma08g00837 Cma-Chr8:5074451 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69083 PF07714 PK_Tyr_Ser-Thr 2.60E-40 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01226 - - csv:101208239 1301.19