Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01228 ATGGCGCCATTATTGTCCTGTAATTTGCCTGGAATAGCCGAAAGGGATGGTAAATTATTTGCTTCCCAGAATCTTATTTCGGAGAAACTTCCTTCTGGCTGGCCTTTGCCGGCTGTGCTGGCCAGAGTTTTTATTCTTAAGCAACTGAATCACCTATACGATCCAAACTACTGGGATTCGACCTGGATATCCTCGTCGCGTCAGTGCAAGTTCATCTCCAATCTGATGGGATCAACAGAGGAGAAAACAAATTACCTATCAGATGAAGGAACTCCGTTGAAGTCCTCACCGGTCGCGAAAAATGTATCGCATAGCTTCGATTGCGAGACGGGTCCTGTTCGTTCTTCCCCAGATGTTACAAGATGGTGGAAGACTAACAACATTCGTATTAGACCTCTTAGAAGTGCTTATATAGTGTTAGTTAGAGCAAAGATCAACGTGTTACTACCTTTTGGTCCTTTGGCTATTCTGCTACACTACTTGACCGGAAAGCATGGATGGGTCTTCTTTTTCACTTTACTTGGCATTGCACCCTTGGCAGAGCGTCTTGGTTATGCAACCGAGCAGCTTGCCTTCTACACTGGACCAACAGTTGGCGGTCTTTTGAATGCAACATTTGGAAATGCTACCGAAATGATTATATCGATTTATGCGTTAAAGAGTGGGATGATTAGGGTTGTTCAACAGTCATTACTGGGTTCAATCTTGTCAAATATGCTCCTTGTTCTTGGTTGTGCTTTCTTTACTGGTGGGATTGTTCATCATAAGGTGCAGGTTTTCAATAAGGGTTCTGCTGTTGTTAATTCAGGATTGTTGTTGATGGCTGTTATGGGAACAACTTTTCCGGCTGTTCTTCATTTCACCCACACAGAACTTCATTCTGGAGAGTCAGCACTATCTCTTTCAAGATTTAGCAGCTGTATTATGTTAATTGCATATGCAAGCTATCTTTTCTTTCAACTTAAAAGTCAGCAGGACCTCTATGGTCCTCTTGATGAGGTAGGTGAAGATGAAGTTGAGGATGATTCTGAGATTTATGCTTGGGAAGCAATTGGATGGCTTGCTATCTTGACTGTATGGGTATCTATTTTATCTGGATATCTTGTTGATGCTATCCAGGGAGCATCTGAATCATTGAATTTGCCAGTGGCTTTTATTAGTGTAATTTTGTTGCCAATTGTTGGAAATGCTGCTGAACATGCGAGTGCAATCATGTTTGCCATGAAGGATAAGCTTGACATCACCCTTGGAGTTGCTATTGGATCGTCGACACAAATATCCATGTTTGTGATCCCGTTTTGCGTGGTTGTTGGATGGTGCATGGGGGAACCAATGGACTTGAACTTTAAACTCTTTGAGACAGCGACTTTGTTCATCACTGTTTTAGTGGTGGCCTTTATGTTGCAGGAGGGGACATCCAATTATTTCAAAGGTGTAATGCTTATTCTATGCTACCTCATTGTGGCAGCCAGTTTTTTTGTACACATTGACCCTACTAATGCAAGTATGTCCCTGGGAATTTACTGCAACCTGAACCTTTGCATTGCATTGGTTCTCAAACCACCATTGCTTCAGTTCGATGGAACCTGCAAACATTGGAGGACTCACACAAATGGTTTGGTCTTTAAATGGAGTTTGGTTTCATTTGTTGAACTGTACTGTAATCTTTTTGTGGCTTGA 1680 42.08 MAPLLSCNLPGIAERDGKLFASQNLISEKLPSGWPLPAVLARVFILKQLNHLYDPNYWDSTWISSSRQCKFISNLMGSTEEKTNYLSDEGTPLKSSPVAKNVSHSFDCETGPVRSSPDVTRWWKTNNIRIRPLRSAYIVLVRAKINVLLPFGPLAILLHYLTGKHGWVFFFTLLGIAPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHKVQVFNKGSAVVNSGLLLMAVMGTTFPAVLHFTHTELHSGESALSLSRFSSCIMLIAYASYLFFQLKSQQDLYGPLDEVGEDEVEDDSEIYAWEAIGWLAILTVWVSILSGYLVDAIQGASESLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGEPMDLNFKLFETATLFITVLVVAFMLQEGTSNYFKGVMLILCYLIVAASFFVHIDPTNASMSLGIYCNLNLCIALVLKPPLLQFDGTCKHWRTHTNGLVFKWSLVSFVELYCNLFVA 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9748614 9753418 - CmaCh14G012280.1 Cma14g01228 308211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01228 559 Pfam Sodium/calcium exchanger protein 351 490 IPR004837 GO:0016021|GO:0055085
Cma14g01228 559 Pfam Sodium/calcium exchanger protein 167 321 IPR004837 GO:0016021|GO:0055085
Cma14g01228 559 PANTHER VACUOLAR CATION/PROTON EXCHANGER 76 507 - -
Cma14g01228 559 TIGRFAM caca2: calcium/proton exchanger 139 493 - -
Cma14g01228 559 Gene3D - 196 336 IPR044880 -
Cma14g01228 559 Gene3D - 337 494 IPR044880 -
Cma14g01228 559 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 76 507 IPR004713 GO:0006812|GO:0008324|GO:0016021
Cma14g01228 559 TIGRFAM cax: calcium/proton exchanger 148 493 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma14g01228 Cma-Chr14:9748614 Cma20g00699 Cma-Chr20:3216684 0 dispersed
Cma14g01228 Cma-Chr14:9748614 Cma01g00022 Cma-Chr1:86530 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01228 K07300 - csv:101219432 781.171