Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01270 ATGAGTCGAGAATCGAAACGGGGAAAGCAGGACAAAGGTTCTGATGATGCTCAGAAAGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTTGTTTGGGCGTTGACTCATGTTGTTCAAATTGGTGATTGCATAACTTTGCTGGTTGTTGTTCCTTCTCAGAGCTCTGGTAGAAAATTCTGGGGTTTTCCGAGATTCGCTGGGGATTGTGCGAGTGGTCACAAGAAAGCTCACTCTGGAACGAGCTCGGAGCTGAAATGTGATATCACTGATTCATGTTCACAGATGATCCTTCAGCTTCATGATGTTTATGATCCAAATAAGATCAATGTGAAAATTAAGATCGTTTCGGCATCGCCTAATGGGGCCGTGGCCGCAGAGGCCAAGAGAGCTCAAGCTAGCTGGGTTGTACTAGACAAACATCTCAAACACGAGGAGAAATGTTGCATGGAAGAGTTACAATGCAACATTGTTGTAATGAAGCGATCGCAGCCAAAAGTTCTTCGTTTGAACTTGGTTGGTTCTCCAAAGAAGGAACCAGACATGCCTTCTCTGTTACCTTATGATATAGACGACGGGTCCGAAAGCAATCGAAAAGAAAACGATCCTCTCGATTTCATTCGAGGACCAGTTGTGACTCCCAATAGCAGTCCAGAGTTAGACACGCCTTTTACTGCTACCGAAGCTGGAACATCATCAGTGTCGAGCTCAGATCCTGGAACTTCTCCATTTTTCGTCTCGGAAATGAACGGAGACATGAAGAAAGAGGAGTTGTTTGTTATCAAGGAAAATAAAGAACTTGATGCTGCTAGTTCAGACTCAGATATTGAGAATTTATCTGTTTCTTCGAGGAGTTTAAGGTTCCAACCATGGATGTCAGAACTTCTAAGCTCTCATCTTCAATCCTCTCAACACATTGGAAGGCCACAAAGATGTGATGATAGGAATCAAATGTCGACAAGAAAATCTTCAAAACTCGACAGAGAATCTAGCATTGGAATGTCGAGCCATATAAGCGACAATGATTTCCATGGCGATGTACGAGATGCAGTTTCATTATCCAGGAACACGCCGCCCGGCCCTCCTCCCTTATGTTCAATATGCCAACACAAGGCACCAGTTTTCGGAAAGCCTCCGAGGTGGTTCAGCTATGCCGAGCTCGAGCTCGCTACAGGTGGATTTTCACAAGCCAACTTTTTGGCAGAAGGAGGATATGGATCTGTTCACCGAGGTGTCCTCCCGGACGGACAGGTGATTGCTGTCAAGCAGCACAAACTGGCTAGTTCTCAAGGAGACCATGAATTTTGTTCCGAAGTCGAAGTTCTTAGCTGTGCACAGCATCGAAATGTCGTTTTGTTGATCGGCTTTTGTATAGAGGAGAAAAGAAGGTTGTTGGTTTATGAATACATCTGCAATGGCTCATTAGATTCTCATTTATATGGACGACAACAAGAGCCGTTAGAATGGTCTGCTCGACAAAAAGTTGCCGTGGGAGCTGCACGGGGACTACGGTATCTCCATGAAGAATGTCGAGTCGGTTGCATTGTTCATCGGGATATGCGGCCGAACAACATTCTTATCACCCATGATTTCGAACCATTAGTTGGAGATTTTGGTCTTGCAAGATGGCAGCCTGACGGAGATACCGGTGTCGAGACGAGAGTTATTGGAACGTTTGGGTATTTGGCTCCCGAGTACGCTCAAAGCGGTCAAATCACCGAAAAAGCTGATGTTTATTCCTTCGGCGTGGTACTGGTGGAGCTAATTACCGGAAGAAAAGCCGTTGACCTTAACCGACCAAAAGGTCAACAGTGTCTCACTGAATGGGCACGCCCCCTGTTGGATGAGTTTCTCATTGATGAACTGATTGATCCAAGGTTGGGAAATAGCTTCGCCGAGAATGAAGTATACTGTATGCTGCACGCCGCGTCGTTATGCATCCGAAGAGATCCGAACGCGAGGCCTCGTATGTCACAGGTTTTACGGATTCTAGAGGGCGACCTCATCATGGATGCTAATTACCTGTCGACACCCGGTTACGACGTGGGTAATCGTAGCGGTCGGATGTGGACTGAGCAGCAGCAGCAGCGGCAAAACTACAGTGGCTCGTTATCGGACGAGACGCTCGAGAGGTTCAATGAAAAGGCGTGTCTTGAGAGCTTAAGATCAGGTGGTTACTGGGAGAGGGACAAGACAAGGAGGAGTTCAAGTAGCAGTAATTTGTAA 2238 46.29 MSRESKRGKQDKGSDDAQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSELKCDITDSCSQMILQLHDVYDPNKINVKIKIVSASPNGAVAAEAKRAQASWVVLDKHLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEPDMPSLLPYDIDDGSESNRKENDPLDFIRGPVVTPNSSPELDTPFTATEAGTSSVSSSDPGTSPFFVSEMNGDMKKEELFVIKENKELDAASSDSDIENLSVSSRSLRFQPWMSELLSSHLQSSQHIGRPQRCDDRNQMSTRKSSKLDRESSIGMSSHISDNDFHGDVRDAVSLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVLLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKVAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLNRPKGQQCLTEWARPLLDEFLIDELIDPRLGNSFAENEVYCMLHAASLCIRRDPNARPRMSQVLRILEGDLIMDANYLSTPGYDVGNRSGRMWTEQQQQRQNYSGSLSDETLERFNEKACLESLRSGGYWERDKTRRSSSSSNL 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10054936 10059376 - CmaCh14G012700.1 Cma14g01270 308253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01270 745 ProSitePatterns Tyrosine protein kinases specific active-site signature. 519 531 IPR008266 GO:0004672|GO:0006468
Cma14g01270 745 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 703 - -
Cma14g01270 745 PANTHER OS01G0253100 PROTEIN 15 703 IPR045271 GO:0004714|GO:0006468
Cma14g01270 745 Gene3D Transferase(Phosphotransferase) domain 1 474 678 - -
Cma14g01270 745 MobiDBLite consensus disorder prediction 219 247 - -
Cma14g01270 745 Pfam Protein tyrosine and serine/threonine kinase 402 666 IPR001245 GO:0004672|GO:0006468
Cma14g01270 745 MobiDBLite consensus disorder prediction 195 247 - -
Cma14g01270 745 Gene3D Phosphorylase Kinase; domain 1 370 473 - -
Cma14g01270 745 MobiDBLite consensus disorder prediction 304 349 - -
Cma14g01270 745 CDD STKc_IRAK 404 670 - -
Cma14g01270 745 ProSiteProfiles Protein kinase domain profile. 398 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01270 745 SUPERFAMILY Protein kinase-like (PK-like) 382 676 IPR011009 -
Cma14g01270 745 MobiDBLite consensus disorder prediction 312 332 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00070 Cma14g01270 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01288 Cma-Chr4:6566999 Cma14g01270 Cma-Chr14:10054936 2.40E-95 dispersed
Cma04g02412 Cma-Chr4:16645846 Cma14g01270 Cma-Chr14:10054936 1.29E-105 dispersed
Cma09g00181 Cma-Chr9:763087 Cma14g01270 Cma-Chr14:10054936 0 dispersed
Cma10g00709 Cma-Chr10:3187557 Cma14g01270 Cma-Chr14:10054936 0 dispersed
Cma14g01270 Cma-Chr14:10054936 Cma15g00198 Cma-Chr15:963133 2.62E-98 dispersed
Cma01g00070 Cma-Chr1:300554 Cma14g01270 Cma-Chr14:10054936 0 wgd
Cma11g00681 Cma-Chr11:3301309 Cma14g01270 Cma-Chr14:10054936 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69086 PF07714 PK_Tyr_Ser-Thr 2.60E-40 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01270 - - csv:101206876 1394.41