Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01287 ATGCAGCTCTCAGACATGAAGTCCCTCAGAACAATTTTCTTTTCTCGAAAGCACTTTCTCATTTCCACAATCTCCTCTTCTTCTACTCCATCGCCCATCTCCTCCCGCTCCCGCCTCAATCCCAGCTCTTCCCTCTTTCACTGTGCCGGCCGTTTCAACGCCGCGCAGCTGTCAACTACTGACGTCCCTGCTCCGAACGGCAACTGCCTCGCCGCTTCCGGTCCAGGAAACGGAAAGGACCGCGGTGTTTGGACTATTTACGACCCCGTTACGAGTAAGTTGCTTACTCAAAGGGTCAAAAGCAGTAGCGATAGAAAAGATCCCGAACCGAGCTTTGGAAATGAAACCTTCGGAGCTTCGTCGAGAAATGGAGATGGGACTGAGGAGTTCTTGAACGAGAAGACTTCGGAGAGTGTGAGGAAAGTGGGTTTAGAAGGTGGGTCTGTTAGTAGGCCAAAGTTGGGGAAGATTGTGGGATCGAAGAAGAAGAAGAGCAAAGTTTCTTGGGTTTGTTCGAGCTGTGGCCATAGTGAGGGGCAGTGGTGGGGAACTTGTCGCTCCTGTGATATGGTTGGGACAATGAAGCAGTTTACTGAGGGGGATGATACTGGAGGAGGGAGTCGAGGGTTTGAAGTTTCAGAAAATGTGGTTCGAGCATGGCTTCCAAAGCAGGCCACCGACGTGCATCCTCTGCGGTTGACAGATGTGAACCGAGGGATCAACACTCTGGATTGGAGACTTCCTTTGCCTGGTCCCTTTGGAAATGAAGTGGCGAGGGTACTTGGTGGTGGGCTGGTTCCAGGTTCTCTGGTTTTGGTTGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGATTGCTGCAATTTTAGCTGAAGCGTGTGGTGAAGGCGATTTGACATCGGTTATTTATGTCTCTGGTGAAGAGAGTGTGGATCAAATTGGAAATAGAGCAGATCGATTGAATATTGAAACAGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGATATATTCGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATCGATTCTATTCAGACAGTTTATTTGCAAGGAGTAGCTGGAAGTGCAGGAGGAATTGGACAGGTGAAGGAATGCACCTCGGCCCTTCTTCGTTTTGCAAAGAGAACCGGCATCCCCATTTTATTGGGGGAGAAATGCTCGTCACATCGGCTACTACGACCAGTGAAGAATCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAAATGTTGCCATCGGGACTGGAAGTGGTGTCAAATCCGAGCGAGATGTTTAGAAGGGATAACAATGCAAATTCGAACTCGGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAACTCGCACCTTCCTGCTTGAAATTCAGGTTCTCATGAAGCAAGCTGGGTTAAAGCTACAAGATAGCAGACTGCAGGAGATCTTGCGATTGCAATGGCAATTTGCAGCAGGCATCTTTTTGGAGTTCCCCATTCCGAACGACATTGCATTCATCGGTGAAATCGGCCTTGGCGGTGAGCTTCGCATGGTGAGTCGAATGGAGAAGCGGATCAATACTGTGTCTAAATTGGGTTTCAAAAGATGTGTAGTACCCAAATCAGCTGAGAAGTGTCTAGGAGTGGTAGAATTGGGAGAGACGAGGCTGATAGGTTGCAGAAATTTGAAAGATGTTATCAACGATGTGTTTATGGCGAGAGATGGAGCTAGAAGTGTACAGTCTTTTGTTGGGTTTGCTACATCGGGTGCAGTTGCTGCAAGACCAACGTCTGGGGGCTTTTTTAGCTGGCTGACTGGAGAACGTTCAAGCTCGCTTCCGCCATTGGAAACACCTCTATCTGGCATTACCCTACCACCACCACTGCCTGATTACGTTGAACCAAGCAAGACCAAGATTACAACTCTTCCTAATGGTGTCAGAATAGCTTCAGAAACTTCTTCGAACCCTGCAGCCTCTATTGGGATATATCTTGATTGTGGTTCCATATATGAGACCCCAGTGTCTTCTGGAGCATCACATTTGTTGGAAAGGTTGGCCTTCAAGAGTACGACAAACCGAAGCCATTTGCGCATTGTTAGGGAAGTTGAAGCTATTGGTGGTAACACAGGTGCCTCCGCCTCCCGAGAGCAAATGGGATACACTTTTGATGCTTTAAAGACGTATAGTCCAGAAATGGTGGAATTGCTTGTAGACTGTGTCAGGAATCCTGTTTTCTTGGATTGGGAAATCGATGAAGAGCTGCAAAAGCTAAAAGCAGAAATTGCAGAACTTTCAAATAACCCACAGGGCTTACTTCTTGAGGCAATTCATTCTGCTGGGTATTCTGGTGCACTTGCAAATCCTCTTGTGGCCCCAGAGTATGCGTTAAGCAGATTGGATGGCACCATCTTGGAGGAATTTATTGCTGATAACTATACTGCCCCTAGAATGGTGCTGGCAGCATCTGGGGTTGAACATGAGGAGCTTTTATCCATTGCAGAACCTCTTCTATCTGACCTACCCAAAGTACCTAGCCCAAAAGTGCCAGAATCTGCCTATGTTGGAGGGGATTATCGTCGCCAAGCTGATTCTGGGAGCACGCATGTTGCCCTGGCTTTTGAGGTTCCTGGTGGCTGGCATAAGGAGAAAGATGCCATTGTTTTGACTGTTCTTCAGATGCTTATGGGAGGTGGTGGTTCATTTTCTGCTGGGGGCCCGGGTAAAGGCATGCACTCGAGGTTATATCTCCGAGTTTTGAATGAGTACCAGCAGATTCAATCTTTTTCTGCATTTAACAGCATCTTCAATAACACGGGACTGTTTGGAATTTATGCTAGTACTGGTTCTGACTTTGTGGCCCATGCCGTTGATATTGCTGCATCAGAACTAATCTCAATTGCAACTCCTGGACAAGTTTCCGAGGTGCAACTTAACCGTGCCAAAGAGTCAACAAAATCTGCAGTTTTGATGAATCTGGAGTCCAGGATGATTGTATCCGAGGATATTGGGAGGCAGATTTTGACATACGGAGAGAGGAAACCTGTTGAGCACTTCTTAAAGGCTGTAGACTCGATCACTTTGAACGATATTACTAACATTGCTCAGAAAGTTATGTCTTCTCCTTTAACAATGGCATCCTATGGAGATGTTATTAATGTCCCGACCTACGAGTCTGTTAACAGAAGTACTCGGTGGAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATAGTTGGTAACGACGGCTCTGTTTGGGCTCAGAGCTCCGAATTCCCCCAGTACAAGCCAGAAGAGATTTCTGCCATTATGAAGGATTTTGATGAGCCTGGAACTCTTGCTCCGACTGGGTTGCACCTTGCTGGATCGAAGTACATGGTTATCCAGGGTGAATCTGGAGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGAATCACTGTAAAGAAAACAAACCAAGCACTGATATTTGGTTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCATGTAA 3624 46.63 MQLSDMKSLRTIFFSRKHFLISTISSSSTPSPISSRSRLNPSSSLFHCAGRFNAAQLSTTDVPAPNGNCLAASGPGNGKDRGVWTIYDPVTSKLLTQRVKSSSDRKDPEPSFGNETFGASSRNGDGTEEFLNEKTSESVRKVGLEGGSVSRPKLGKIVGSKKKKSKVSWVCSSCGHSEGQWWGTCRSCDMVGTMKQFTEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEACGEGDLTSVIYVSGEESVDQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDNNANSNSEYLAGLAVAVIMDGTRTFLLEIQVLMKQAGLKLQDSRLQEILRLQWQFAAGIFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVSKLGFKRCVVPKSAEKCLGVVELGETRLIGCRNLKDVINDVFMARDGARSVQSFVGFATSGAVAARPTSGGFFSWLTGERSSSLPPLETPLSGITLPPPLPDYVEPSKTKITTLPNGVRIASETSSNPAASIGIYLDCGSIYETPVSSGASHLLERLAFKSTTNRSHLRIVREVEAIGGNTGASASREQMGYTFDALKTYSPEMVELLVDCVRNPVFLDWEIDEELQKLKAEIAELSNNPQGLLLEAIHSAGYSGALANPLVAPEYALSRLDGTILEEFIADNYTAPRMVLAASGVEHEELLSIAEPLLSDLPKVPSPKVPESAYVGGDYRRQADSGSTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTGSDFVAHAVDIAASELISIATPGQVSEVQLNRAKESTKSAVLMNLESRMIVSEDIGRQILTYGERKPVEHFLKAVDSITLNDITNIAQKVMSSPLTMASYGDVINVPTYESVNRSTRWRSKMSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSEFPQYKPEEISAIMKDFDEPGTLAPTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGM 1207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10164737 10178730 + CmaCh14G012870.1 Cma14g01287 308270

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01287 1207 Gene3D - 859 1072 - -
Cma14g01287 1207 SUPERFAMILY Ribosomal protein S5 domain 2-like 410 577 IPR020568 -
Cma14g01287 1207 Gene3D - 255 431 IPR027417 -
Cma14g01287 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 257 443 IPR027417 -
Cma14g01287 1207 ProSitePatterns Insulinase family, zinc-binding region signature. 675 698 IPR001431 GO:0004222|GO:0006508
Cma14g01287 1207 Pfam Profilin 1077 1207 IPR005455 GO:0003779
Cma14g01287 1207 SUPERFAMILY Profilin (actin-binding protein) 1078 1207 IPR036140 -
Cma14g01287 1207 Gene3D Dynein light chain 2a, cytoplasmic 1075 1207 - -
Cma14g01287 1207 Pfam Peptidase M16 inactive domain 812 990 IPR007863 -
Cma14g01287 1207 Gene3D - 637 847 - -
Cma14g01287 1207 SMART prof_2 1077 1207 IPR005455 GO:0003779
Cma14g01287 1207 Pfam Insulinase (Peptidase family M16) 656 800 IPR011765 -
Cma14g01287 1207 SUPERFAMILY LuxS/MPP-like metallohydrolase 644 854 IPR011249 GO:0046872
Cma14g01287 1207 MobiDBLite consensus disorder prediction 97 136 - -
Cma14g01287 1207 CDD PROF 1078 1207 IPR005455 GO:0003779
Cma14g01287 1207 SUPERFAMILY LuxS/MPP-like metallohydrolase 861 1065 IPR011249 GO:0046872
Cma14g01287 1207 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 595 1070 IPR037715 GO:0006627
Cma14g01287 1207 Gene3D - 499 591 IPR014721 -
Cma14g01287 1207 Coils Coil 755 775 - -
Cma14g01287 1207 PANTHER METALLOPROTEASE 595 1070 - -
Cma14g01287 1207 Pfam AAA domain 261 396 - -
Cma14g01287 1207 PRINTS Plant profilin signature 1147 1156 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1103 1116 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1180 1193 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1193 1206 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1077 1090 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1128 1142 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1160 1175 IPR005455 GO:0003779
Cma14g01287 1207 ProSiteProfiles RecA family profile 1. 247 402 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Cma14g01287 1207 PRINTS Profilin signature 1079 1088 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1176 1189 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1116 1136 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1140 1154 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1189 1206 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1097 1106 IPR005455 GO:0003779
Cma14g01287 1207 SMART AAA_5 267 411 IPR003593 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01287 K01412 PMPCA, MAS2; mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64] - csv:101217854 870.922
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00089 Cma-Chr1:414205 Cma14g01287 Cma-Chr14:10164737 5.20E-117 dispersed
Cma01g00091 Cma-Chr1:420491 Cma14g01287 Cma-Chr14:10164737 5.93E-75 dispersed
Cma01g00455 Cma-Chr1:2314044 Cma14g01287 Cma-Chr14:10164737 7.15E-56 dispersed
Cma05g01381 Cma-Chr5:10355274 Cma14g01287 Cma-Chr14:10164737 0 dispersed
Cma14g01125 Cma-Chr14:8536525 Cma14g01287 Cma-Chr14:10164737 8.07E-58 dispersed
Cma01g00088 Cma-Chr1:409998 Cma14g01287 Cma-Chr14:10164737 0 wgd
Cma12g01274 Cma-Chr12:9918513 Cma14g01287 Cma-Chr14:10164737 3.22E-65 wgd
Cma14g01287 Cma-Chr14:10164737 Cma17g00758 Cma-Chr17:6120509 1.96E-69 wgd
Cma14g01287 Cma-Chr14:10164737 Cma05g01374 Cma-Chr5:10333305 9.84E-70 wgd
Cma14g01287 Cma-Chr14:10164737 Cma08g00743 Cma-Chr8:4459692 5.78E-67 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi9g257 . . . . . . Bma10g00769 . . . . Cma14g01287 . Car14g01137 Sed06g2192 . . Bhi01g03371 Tan04g2700 Cmetu04g2144 . . . . . . . . . . . . . . . . . Chy04g00960 . . . Bda05g00577 . . . . . . . Cmo14g01320 . . . . . Cpe03g01088 . . . . . . . . . . . . . . Lsi07g00534 Csa03g02343 . Cme04g01152
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cma02g00806 CST 45 421 Cytoskeleton Gene Families AT2G37620 96.3 7.9e-215 743.4
Cma07g00992 . 1 377 Cytoskeleton Gene Families AT2G37620 96.3 1.1e-213 739.6
Cma14g00415 . 38 414 Cytoskeleton Gene Families AT2G37620 96.3 1.5e-213 739.2
Cma07g00783 CCT,CST 1 377 Cytoskeleton Gene Families AT2G37620 95.5 3.3e-213 738.0
Cma20g01073 CCT 1 377 Cytoskeleton Gene Families AT2G37620 95.5 3.3e-213 738.0
Cma03g01077 CCT,CST 30 406 Cytoskeleton Gene Families AT2G37620 95.5 3.3e-213 738.0
Cma02g00615 . 1 377 Cytoskeleton Gene Families AT2G37620 95.5 3.3e-213 738.0
Cma06g00102 . 48 424 Cytoskeleton Gene Families AT2G37620 95.8 1.3e-212 736.1
Cma15g00386 CCT 1 377 Cytoskeleton Gene Families AT2G37620 95.8 2.8e-212 734.9
Cma19g00282 . 1 377 Cytoskeleton Gene Families AT2G37620 94.7 2.8e-212 734.9
Cma20g00406 CST 1 377 Cytoskeleton Gene Families AT2G37620 95.2 2.8e-212 734.9
Cma04g01189 CCT,CST 70 446 Cytoskeleton Gene Families AT2G37620 95.5 3.7e-212 734.6
Cma11g01622 . 1 377 Cytoskeleton Gene Families AT2G37620 94.4 4.8e-212 734.2
Cma04g00220 CCT,CST 1 377 Cytoskeleton Gene Families AT2G37620 95.5 4.8e-212 734.2
Cma03g00427 . 1 371 Cytoskeleton Gene Families AT2G37620 96.2 2.9e-209 724.9
Cma04g02644 . 240 609 Cytoskeleton Gene Families AT2G37620 93.2 1.9e-200 695.7
Cma15g00386 CCT 1 377 Cytoskeleton Gene Families AT5G59370 96.8 8.7e-214 740.0
Cma04g01189 CCT,CST 70 446 Cytoskeleton Gene Families AT5G59370 96.3 3.3e-213 738.0
Cma06g00102 . 48 424 Cytoskeleton Gene Families AT5G59370 96.6 4.3e-213 737.6
Cma14g00415 . 38 414 Cytoskeleton Gene Families AT5G59370 96.3 1.6e-212 735.7
Cma04g00220 CCT,CST 1 377 Cytoskeleton Gene Families AT5G59370 95.8 2.2e-212 735.3
Cma02g00806 CST 45 421 Cytoskeleton Gene Families AT5G59370 95.8 3.7e-212 734.6
Cma20g00406 CST 1 377 Cytoskeleton Gene Families AT5G59370 95.8 8.2e-212 733.4
Cma07g00992 . 1 377 Cytoskeleton Gene Families AT5G59370 95.8 5.3e-211 730.7
Cma19g00282 . 1 377 Cytoskeleton Gene Families AT5G59370 93.9 1.2e-210 729.6
Cma11g01622 . 1 377 Cytoskeleton Gene Families AT5G59370 94.2 1.2e-210 729.6
Cma07g00783 CCT,CST 1 377 Cytoskeleton Gene Families AT5G59370 94.4 4.5e-210 727.6
Cma20g01073 CCT 1 377 Cytoskeleton Gene Families AT5G59370 94.4 4.5e-210 727.6
Cma03g01077 CCT,CST 30 406 Cytoskeleton Gene Families AT5G59370 94.4 4.5e-210 727.6
Cma02g00615 . 1 377 Cytoskeleton Gene Families AT5G59370 94.4 4.5e-210 727.6
Cma03g00427 . 1 371 Cytoskeleton Gene Families AT5G59370 96.0 7.2e-208 720.3
Cma04g02644 . 240 609 Cytoskeleton Gene Families AT5G59370 94.3 5.9e-202 700.7
Cma15g00386 CCT 1 377 Cytoskeleton Gene Families AT3G46520 97.1 3.9e-214 741.1
Cma04g01189 CCT,CST 70 446 Cytoskeleton Gene Families AT3G46520 96.6 1.5e-213 739.2
Cma06g00102 . 48 424 Cytoskeleton Gene Families AT3G46520 96.8 1.9e-213 738.8
Cma14g00415 . 38 414 Cytoskeleton Gene Families AT3G46520 96.6 7.4e-213 736.9
Cma04g00220 CCT,CST 1 377 Cytoskeleton Gene Families AT3G46520 96.0 9.7e-213 736.5
Cma02g00806 CST 45 421 Cytoskeleton Gene Families AT3G46520 96.0 1.6e-212 735.7
Cma20g00406 CST 1 377 Cytoskeleton Gene Families AT3G46520 96.0 3.7e-212 734.6
Cma07g00992 . 1 377 Cytoskeleton Gene Families AT3G46520 96.0 2.4e-211 731.9
Cma19g00282 . 1 377 Cytoskeleton Gene Families AT3G46520 94.2 5.3e-211 730.7
Cma11g01622 . 1 377 Cytoskeleton Gene Families AT3G46520 94.4 5.3e-211 730.7
Cma07g00783 CCT,CST 1 377 Cytoskeleton Gene Families AT3G46520 94.7 2.0e-210 728.8
Cma20g01073 CCT 1 377 Cytoskeleton Gene Families AT3G46520 94.7 2.0e-210 728.8
Cma03g01077 CCT,CST 30 406 Cytoskeleton Gene Families AT3G46520 94.7 2.0e-210 728.8
Cma02g00615 . 1 377 Cytoskeleton Gene Families AT3G46520 94.7 2.0e-210 728.8
Cma03g00427 . 1 371 Cytoskeleton Gene Families AT3G46520 95.7 2.1e-207 718.8
Cma04g02644 . 240 609 Cytoskeleton Gene Families AT3G46520 94.6 2.6e-202 701.8
Cma02g00806 CST 45 421 Cytoskeleton Gene Families AT3G12110 96.8 4.6e-215 744.2
Cma04g00220 CCT,CST 1 377 Cytoskeleton Gene Families AT3G12110 96.8 3.9e-214 741.1
Cma06g00102 . 48 424 Cytoskeleton Gene Families AT3G12110 96.8 3.9e-214 741.1
Cma04g01189 CCT,CST 70 446 Cytoskeleton Gene Families AT3G12110 96.6 8.7e-214 740.0
Cma07g00992 . 1 377 Cytoskeleton Gene Families AT3G12110 96.6 8.7e-214 740.0
Cma20g00406 CST 1 377 Cytoskeleton Gene Families AT3G12110 96.3 8.7e-214 740.0
Cma14g00415 . 38 414 Cytoskeleton Gene Families AT3G12110 96.6 1.1e-213 739.6
Cma15g00386 CCT 1 377 Cytoskeleton Gene Families AT3G12110 96.0 4.3e-213 737.6
Cma07g00783 CCT,CST 1 377 Cytoskeleton Gene Families AT3G12110 95.5 1.3e-212 736.1
Cma20g01073 CCT 1 377 Cytoskeleton Gene Families AT3G12110 95.5 1.3e-212 736.1
Cma03g01077 CCT,CST 30 406 Cytoskeleton Gene Families AT3G12110 95.5 1.3e-212 736.1
Cma02g00615 . 1 377 Cytoskeleton Gene Families AT3G12110 95.5 1.3e-212 736.1
Cma19g00282 . 1 377 Cytoskeleton Gene Families AT3G12110 95.0 3.7e-212 734.6
Cma11g01622 . 1 377 Cytoskeleton Gene Families AT3G12110 95.0 8.2e-212 733.4
Cma03g00427 . 1 371 Cytoskeleton Gene Families AT3G12110 96.0 3.8e-209 724.5
Cma04g02644 . 240 609 Cytoskeleton Gene Families AT3G12110 93.5 2.9e-201 698.4
Cma07g00783 CCT,CST 1 377 Cytoskeleton Gene Families AT3G18780 93.1 6.5e-209 723.8
Cma20g01073 CCT 1 377 Cytoskeleton Gene Families AT3G18780 93.1 6.5e-209 723.8
Cma03g01077 CCT,CST 30 406 Cytoskeleton Gene Families AT3G18780 93.1 6.5e-209 723.8
Cma02g00615 . 1 377 Cytoskeleton Gene Families AT3G18780 93.1 6.5e-209 723.8
Cma15g00386 CCT 1 377 Cytoskeleton Gene Families AT3G18780 92.3 1.4e-208 722.6
Cma04g01189 CCT,CST 70 446 Cytoskeleton Gene Families AT3G18780 92.0 3.2e-208 721.5
Cma02g00806 CST 45 421 Cytoskeleton Gene Families AT3G18780 91.8 5.5e-208 720.7
Cma14g00415 . 38 414 Cytoskeleton Gene Families AT3G18780 91.8 7.2e-208 720.3
Cma06g00102 . 48 424 Cytoskeleton Gene Families AT3G18780 91.8 9.4e-208 719.9
Cma19g00282 . 1 377 Cytoskeleton Gene Families AT3G18780 92.0 1.6e-207 719.2
Cma11g01622 . 1 377 Cytoskeleton Gene Families AT3G18780 92.3 1.6e-207 719.2
Cma04g00220 CCT,CST 1 377 Cytoskeleton Gene Families AT3G18780 91.5 2.1e-207 718.8
Cma07g00992 . 1 377 Cytoskeleton Gene Families AT3G18780 91.8 1.4e-206 716.1
Cma20g00406 CST 1 377 Cytoskeleton Gene Families AT3G18780 91.2 3.0e-206 714.9
Cma03g00427 . 1 371 Cytoskeleton Gene Families AT3G18780 91.4 1.2e-202 703.0
Cma04g02644 . 240 609 Cytoskeleton Gene Families AT3G18780 90.3 1.5e-197 686.0
Cma07g00783 CCT,CST 1 377 Cytoskeleton Gene Families AT1G49240 93.4 2.2e-209 725.3
Cma20g01073 CCT 1 377 Cytoskeleton Gene Families AT1G49240 93.4 2.2e-209 725.3
Cma03g01077 CCT,CST 30 406 Cytoskeleton Gene Families AT1G49240 93.4 2.2e-209 725.3
Cma02g00615 . 1 377 Cytoskeleton Gene Families AT1G49240 93.4 2.2e-209 725.3
Cma15g00386 CCT 1 377 Cytoskeleton Gene Families AT1G49240 92.6 5.0e-209 724.2
Cma04g01189 CCT,CST 70 446 Cytoskeleton Gene Families AT1G49240 92.3 1.1e-208 723.0
Cma14g00415 . 38 414 Cytoskeleton Gene Families AT1G49240 92.0 2.5e-208 721.8
Cma06g00102 . 48 424 Cytoskeleton Gene Families AT1G49240 92.0 3.2e-208 721.5
Cma19g00282 . 1 377 Cytoskeleton Gene Families AT1G49240 92.3 5.5e-208 720.7
Cma11g01622 . 1 377 Cytoskeleton Gene Families AT1G49240 92.6 5.5e-208 720.7
Cma04g00220 CCT,CST 1 377 Cytoskeleton Gene Families AT1G49240 91.8 7.2e-208 720.3
Cma02g00806 CST 45 421 Cytoskeleton Gene Families AT1G49240 91.5 1.2e-207 719.5
Cma07g00992 . 1 377 Cytoskeleton Gene Families AT1G49240 91.5 3.0e-206 714.9
Cma20g00406 CST 1 377 Cytoskeleton Gene Families AT1G49240 91.0 6.7e-206 713.8
Cma03g00427 . 1 371 Cytoskeleton Gene Families AT1G49240 91.1 2.6e-202 701.8
Cma04g02644 . 240 609 Cytoskeleton Gene Families AT1G49240 90.3 1.5e-197 686.0
Cma07g00783 CCT,CST 1 377 Cytoskeleton Gene Families AT5G09810 98.4 1.1e-216 749.6
Cma20g01073 CCT 1 377 Cytoskeleton Gene Families AT5G09810 98.4 1.1e-216 749.6
Cma03g01077 CCT,CST 30 406 Cytoskeleton Gene Families AT5G09810 98.4 1.1e-216 749.6
Cma02g00615 . 1 377 Cytoskeleton Gene Families AT5G09810 98.4 1.1e-216 749.6
Cma11g01622 . 1 377 Cytoskeleton Gene Families AT5G09810 96.6 6.1e-215 743.8
Cma19g00282 . 1 377 Cytoskeleton Gene Families AT5G09810 95.8 3.9e-214 741.1
Cma02g00806 CST 45 421 Cytoskeleton Gene Families AT5G09810 95.2 1.3e-212 736.1
Cma20g00406 CST 1 377 Cytoskeleton Gene Families AT5G09810 95.5 2.8e-212 734.9
Cma14g00415 . 38 414 Cytoskeleton Gene Families AT5G09810 95.8 3.7e-212 734.6
Cma06g00102 . 48 424 Cytoskeleton Gene Families AT5G09810 95.8 4.8e-212 734.2
Cma04g01189 CCT,CST 70 446 Cytoskeleton Gene Families AT5G09810 95.5 6.3e-212 733.8
Cma15g00386 CCT 1 377 Cytoskeleton Gene Families AT5G09810 95.5 8.2e-212 733.4
Cma07g00992 . 1 377 Cytoskeleton Gene Families AT5G09810 95.5 1.4e-211 732.6
Cma04g00220 CCT,CST 1 377 Cytoskeleton Gene Families AT5G09810 95.0 4.1e-211 731.1
Cma03g00427 . 1 371 Cytoskeleton Gene Families AT5G09810 95.1 1.2e-207 719.5
Cma04g02644 . 240 609 Cytoskeleton Gene Families AT5G09810 93.0 5.5e-200 694.1
Cma17g00758 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT2G19760 76.3 3.1e-57 218.4
Cma12g01274 . 162 292 Cytoskeleton Gene Families AT2G19760 77.1 3.1e-57 218.4
Cma05g01374 . 1 133 Cytoskeleton Gene Families AT2G19760 75.9 3.4e-56 214.9
Cma08g00743 CCT,CST,ECH 135 264 Cytoskeleton Gene Families AT2G19760 73.8 1.7e-55 212.6
Cma14g01287 . 1077 1205 Cytoskeleton Gene Families AT2G19760 73.6 5.5e-54 207.6
Cma05g01373 CST 1 128 Cytoskeleton Gene Families AT2G19760 71.1 2.0e-48 189.1
Cma01g00091 CCT,ECH 1 179 Cytoskeleton Gene Families AT2G19760 52.5 5.5e-46 181.0
Cma17g00758 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29350 76.3 9.0e-57 216.9
Cma12g01274 . 162 292 Cytoskeleton Gene Families AT4G29350 76.3 2.6e-56 215.3
Cma05g01374 . 1 133 Cytoskeleton Gene Families AT4G29350 74.4 1.4e-54 209.5
Cma08g00743 CCT,CST,ECH 135 263 Cytoskeleton Gene Families AT4G29350 72.9 1.2e-53 206.5
Cma14g01287 . 1077 1207 Cytoskeleton Gene Families AT4G29350 71.8 1.3e-52 203.0
Cma05g01373 CST 1 128 Cytoskeleton Gene Families AT4G29350 70.3 4.9e-47 184.5
Cma01g00091 CCT,ECH 1 181 Cytoskeleton Gene Families AT4G29350 50.3 2.3e-44 175.6
Cma12g01274 . 1 133 Cytoskeleton Gene Families AT4G29340 85.1 5.9e-64 240.7
Cma05g01374 . 1 133 Cytoskeleton Gene Families AT4G29340 83.6 3.9e-63 238.0
Cma17g00758 CCT,CST,ECH 1 131 Cytoskeleton Gene Families AT4G29340 76.9 4.4e-59 224.6
Cma08g00743 CCT,CST,ECH 135 263 Cytoskeleton Gene Families AT4G29340 76.5 1.4e-57 219.5
Cma14g01287 . 1077 1207 Cytoskeleton Gene Families AT4G29340 70.1 1.1e-52 203.4
Cma05g01373 CST 1 128 Cytoskeleton Gene Families AT4G29340 64.9 1.9e-46 182.6
Cma01g00091 CCT,ECH 1 181 Cytoskeleton Gene Families AT4G29340 51.1 5.6e-46 181.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002061 3 2 3 0 3 2 3 2 1 2 2 1 3 2 2 2 1 3 3 2 2 2 2 2 2 2 2 5 2 2 65
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma14g01287 Cma_Chr14 FPKM 39.962067 43.530338 28.511631 31.471098 40.630104 40.155823 40.062607 37.779713 36.700222 36.821808