Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01287 ATGCAGCTCTCAGACATGAAGTCCCTCAGAACAATTTTCTTTTCTCGAAAGCACTTTCTCATTTCCACAATCTCCTCTTCTTCTACTCCATCGCCCATCTCCTCCCGCTCCCGCCTCAATCCCAGCTCTTCCCTCTTTCACTGTGCCGGCCGTTTCAACGCCGCGCAGCTGTCAACTACTGACGTCCCTGCTCCGAACGGCAACTGCCTCGCCGCTTCCGGTCCAGGAAACGGAAAGGACCGCGGTGTTTGGACTATTTACGACCCCGTTACGAGTAAGTTGCTTACTCAAAGGGTCAAAAGCAGTAGCGATAGAAAAGATCCCGAACCGAGCTTTGGAAATGAAACCTTCGGAGCTTCGTCGAGAAATGGAGATGGGACTGAGGAGTTCTTGAACGAGAAGACTTCGGAGAGTGTGAGGAAAGTGGGTTTAGAAGGTGGGTCTGTTAGTAGGCCAAAGTTGGGGAAGATTGTGGGATCGAAGAAGAAGAAGAGCAAAGTTTCTTGGGTTTGTTCGAGCTGTGGCCATAGTGAGGGGCAGTGGTGGGGAACTTGTCGCTCCTGTGATATGGTTGGGACAATGAAGCAGTTTACTGAGGGGGATGATACTGGAGGAGGGAGTCGAGGGTTTGAAGTTTCAGAAAATGTGGTTCGAGCATGGCTTCCAAAGCAGGCCACCGACGTGCATCCTCTGCGGTTGACAGATGTGAACCGAGGGATCAACACTCTGGATTGGAGACTTCCTTTGCCTGGTCCCTTTGGAAATGAAGTGGCGAGGGTACTTGGTGGTGGGCTGGTTCCAGGTTCTCTGGTTTTGGTTGGTGGTGATCCTGGTGTTGGCAAGAGTACATTGTTGTTGCAGATTGCTGCAATTTTAGCTGAAGCGTGTGGTGAAGGCGATTTGACATCGGTTATTTATGTCTCTGGTGAAGAGAGTGTGGATCAAATTGGAAATAGAGCAGATCGATTGAATATTGAAACAGAGAATCTTTTCTTGTATTCAAGTACTGATGTTGAGGATATATTCGAGAAGATTCAGCCTCTATCTCCTAGAGCCTTGATCATCGATTCTATTCAGACAGTTTATTTGCAAGGAGTAGCTGGAAGTGCAGGAGGAATTGGACAGGTGAAGGAATGCACCTCGGCCCTTCTTCGTTTTGCAAAGAGAACCGGCATCCCCATTTTATTGGGGGAGAAATGCTCGTCACATCGGCTACTACGACCAGTGAAGAATCGATTTGGATCAACAGATGAGCTTGGAGTATTTGAAATGTTGCCATCGGGACTGGAAGTGGTGTCAAATCCGAGCGAGATGTTTAGAAGGGATAACAATGCAAATTCGAACTCGGAGTATTTGGCAGGACTTGCTGTTGCAGTGATCATGGATGGAACTCGCACCTTCCTGCTTGAAATTCAGGTTCTCATGAAGCAAGCTGGGTTAAAGCTACAAGATAGCAGACTGCAGGAGATCTTGCGATTGCAATGGCAATTTGCAGCAGGCATCTTTTTGGAGTTCCCCATTCCGAACGACATTGCATTCATCGGTGAAATCGGCCTTGGCGGTGAGCTTCGCATGGTGAGTCGAATGGAGAAGCGGATCAATACTGTGTCTAAATTGGGTTTCAAAAGATGTGTAGTACCCAAATCAGCTGAGAAGTGTCTAGGAGTGGTAGAATTGGGAGAGACGAGGCTGATAGGTTGCAGAAATTTGAAAGATGTTATCAACGATGTGTTTATGGCGAGAGATGGAGCTAGAAGTGTACAGTCTTTTGTTGGGTTTGCTACATCGGGTGCAGTTGCTGCAAGACCAACGTCTGGGGGCTTTTTTAGCTGGCTGACTGGAGAACGTTCAAGCTCGCTTCCGCCATTGGAAACACCTCTATCTGGCATTACCCTACCACCACCACTGCCTGATTACGTTGAACCAAGCAAGACCAAGATTACAACTCTTCCTAATGGTGTCAGAATAGCTTCAGAAACTTCTTCGAACCCTGCAGCCTCTATTGGGATATATCTTGATTGTGGTTCCATATATGAGACCCCAGTGTCTTCTGGAGCATCACATTTGTTGGAAAGGTTGGCCTTCAAGAGTACGACAAACCGAAGCCATTTGCGCATTGTTAGGGAAGTTGAAGCTATTGGTGGTAACACAGGTGCCTCCGCCTCCCGAGAGCAAATGGGATACACTTTTGATGCTTTAAAGACGTATAGTCCAGAAATGGTGGAATTGCTTGTAGACTGTGTCAGGAATCCTGTTTTCTTGGATTGGGAAATCGATGAAGAGCTGCAAAAGCTAAAAGCAGAAATTGCAGAACTTTCAAATAACCCACAGGGCTTACTTCTTGAGGCAATTCATTCTGCTGGGTATTCTGGTGCACTTGCAAATCCTCTTGTGGCCCCAGAGTATGCGTTAAGCAGATTGGATGGCACCATCTTGGAGGAATTTATTGCTGATAACTATACTGCCCCTAGAATGGTGCTGGCAGCATCTGGGGTTGAACATGAGGAGCTTTTATCCATTGCAGAACCTCTTCTATCTGACCTACCCAAAGTACCTAGCCCAAAAGTGCCAGAATCTGCCTATGTTGGAGGGGATTATCGTCGCCAAGCTGATTCTGGGAGCACGCATGTTGCCCTGGCTTTTGAGGTTCCTGGTGGCTGGCATAAGGAGAAAGATGCCATTGTTTTGACTGTTCTTCAGATGCTTATGGGAGGTGGTGGTTCATTTTCTGCTGGGGGCCCGGGTAAAGGCATGCACTCGAGGTTATATCTCCGAGTTTTGAATGAGTACCAGCAGATTCAATCTTTTTCTGCATTTAACAGCATCTTCAATAACACGGGACTGTTTGGAATTTATGCTAGTACTGGTTCTGACTTTGTGGCCCATGCCGTTGATATTGCTGCATCAGAACTAATCTCAATTGCAACTCCTGGACAAGTTTCCGAGGTGCAACTTAACCGTGCCAAAGAGTCAACAAAATCTGCAGTTTTGATGAATCTGGAGTCCAGGATGATTGTATCCGAGGATATTGGGAGGCAGATTTTGACATACGGAGAGAGGAAACCTGTTGAGCACTTCTTAAAGGCTGTAGACTCGATCACTTTGAACGATATTACTAACATTGCTCAGAAAGTTATGTCTTCTCCTTTAACAATGGCATCCTATGGAGATGTTATTAATGTCCCGACCTACGAGTCTGTTAACAGAAGTACTCGGTGGAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATAGTTGGTAACGACGGCTCTGTTTGGGCTCAGAGCTCCGAATTCCCCCAGTACAAGCCAGAAGAGATTTCTGCCATTATGAAGGATTTTGATGAGCCTGGAACTCTTGCTCCGACTGGGTTGCACCTTGCTGGATCGAAGTACATGGTTATCCAGGGTGAATCTGGAGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGAATCACTGTAAAGAAAACAAACCAAGCACTGATATTTGGTTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCATGTAA 3624 46.63 MQLSDMKSLRTIFFSRKHFLISTISSSSTPSPISSRSRLNPSSSLFHCAGRFNAAQLSTTDVPAPNGNCLAASGPGNGKDRGVWTIYDPVTSKLLTQRVKSSSDRKDPEPSFGNETFGASSRNGDGTEEFLNEKTSESVRKVGLEGGSVSRPKLGKIVGSKKKKSKVSWVCSSCGHSEGQWWGTCRSCDMVGTMKQFTEGDDTGGGSRGFEVSENVVRAWLPKQATDVHPLRLTDVNRGINTLDWRLPLPGPFGNEVARVLGGGLVPGSLVLVGGDPGVGKSTLLLQIAAILAEACGEGDLTSVIYVSGEESVDQIGNRADRLNIETENLFLYSSTDVEDIFEKIQPLSPRALIIDSIQTVYLQGVAGSAGGIGQVKECTSALLRFAKRTGIPILLGEKCSSHRLLRPVKNRFGSTDELGVFEMLPSGLEVVSNPSEMFRRDNNANSNSEYLAGLAVAVIMDGTRTFLLEIQVLMKQAGLKLQDSRLQEILRLQWQFAAGIFLEFPIPNDIAFIGEIGLGGELRMVSRMEKRINTVSKLGFKRCVVPKSAEKCLGVVELGETRLIGCRNLKDVINDVFMARDGARSVQSFVGFATSGAVAARPTSGGFFSWLTGERSSSLPPLETPLSGITLPPPLPDYVEPSKTKITTLPNGVRIASETSSNPAASIGIYLDCGSIYETPVSSGASHLLERLAFKSTTNRSHLRIVREVEAIGGNTGASASREQMGYTFDALKTYSPEMVELLVDCVRNPVFLDWEIDEELQKLKAEIAELSNNPQGLLLEAIHSAGYSGALANPLVAPEYALSRLDGTILEEFIADNYTAPRMVLAASGVEHEELLSIAEPLLSDLPKVPSPKVPESAYVGGDYRRQADSGSTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTGSDFVAHAVDIAASELISIATPGQVSEVQLNRAKESTKSAVLMNLESRMIVSEDIGRQILTYGERKPVEHFLKAVDSITLNDITNIAQKVMSSPLTMASYGDVINVPTYESVNRSTRWRSKMSWQSYIDDQLMYEVDGQHLKAAAIVGNDGSVWAQSSEFPQYKPEEISAIMKDFDEPGTLAPTGLHLAGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGM 1207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10164737 10178730 + CmaCh14G012870.1 Cma14g01287 308270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01287 1207 Gene3D - 859 1072 - -
Cma14g01287 1207 SUPERFAMILY Ribosomal protein S5 domain 2-like 410 577 IPR020568 -
Cma14g01287 1207 Gene3D - 255 431 IPR027417 -
Cma14g01287 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 257 443 IPR027417 -
Cma14g01287 1207 ProSitePatterns Insulinase family, zinc-binding region signature. 675 698 IPR001431 GO:0004222|GO:0006508
Cma14g01287 1207 Pfam Profilin 1077 1207 IPR005455 GO:0003779
Cma14g01287 1207 SUPERFAMILY Profilin (actin-binding protein) 1078 1207 IPR036140 -
Cma14g01287 1207 Gene3D Dynein light chain 2a, cytoplasmic 1075 1207 - -
Cma14g01287 1207 Pfam Peptidase M16 inactive domain 812 990 IPR007863 -
Cma14g01287 1207 Gene3D - 637 847 - -
Cma14g01287 1207 SMART prof_2 1077 1207 IPR005455 GO:0003779
Cma14g01287 1207 Pfam Insulinase (Peptidase family M16) 656 800 IPR011765 -
Cma14g01287 1207 SUPERFAMILY LuxS/MPP-like metallohydrolase 644 854 IPR011249 GO:0046872
Cma14g01287 1207 MobiDBLite consensus disorder prediction 97 136 - -
Cma14g01287 1207 CDD PROF 1078 1207 IPR005455 GO:0003779
Cma14g01287 1207 SUPERFAMILY LuxS/MPP-like metallohydrolase 861 1065 IPR011249 GO:0046872
Cma14g01287 1207 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 595 1070 IPR037715 GO:0006627
Cma14g01287 1207 Gene3D - 499 591 IPR014721 -
Cma14g01287 1207 Coils Coil 755 775 - -
Cma14g01287 1207 PANTHER METALLOPROTEASE 595 1070 - -
Cma14g01287 1207 Pfam AAA domain 261 396 - -
Cma14g01287 1207 PRINTS Plant profilin signature 1147 1156 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1103 1116 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1180 1193 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1193 1206 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1077 1090 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1128 1142 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Plant profilin signature 1160 1175 IPR005455 GO:0003779
Cma14g01287 1207 ProSiteProfiles RecA family profile 1. 247 402 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Cma14g01287 1207 PRINTS Profilin signature 1079 1088 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1176 1189 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1116 1136 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1140 1154 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1189 1206 IPR005455 GO:0003779
Cma14g01287 1207 PRINTS Profilin signature 1097 1106 IPR005455 GO:0003779
Cma14g01287 1207 SMART AAA_5 267 411 IPR003593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma01g00089 Cma-Chr1:414205 Cma14g01287 Cma-Chr14:10164737 5.20E-117 dispersed
Cma01g00091 Cma-Chr1:420491 Cma14g01287 Cma-Chr14:10164737 5.93E-75 dispersed
Cma01g00455 Cma-Chr1:2314044 Cma14g01287 Cma-Chr14:10164737 7.15E-56 dispersed
Cma05g01381 Cma-Chr5:10355274 Cma14g01287 Cma-Chr14:10164737 0 dispersed
Cma14g01125 Cma-Chr14:8536525 Cma14g01287 Cma-Chr14:10164737 8.07E-58 dispersed
Cma01g00088 Cma-Chr1:409998 Cma14g01287 Cma-Chr14:10164737 0 wgd
Cma12g01274 Cma-Chr12:9918513 Cma14g01287 Cma-Chr14:10164737 3.22E-65 wgd
Cma14g01287 Cma-Chr14:10164737 Cma17g00758 Cma-Chr17:6120509 1.96E-69 wgd
Cma14g01287 Cma-Chr14:10164737 Cma05g01374 Cma-Chr5:10333305 9.84E-70 wgd
Cma14g01287 Cma-Chr14:10164737 Cma08g00743 Cma-Chr8:4459692 5.78E-67 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01287 K01412 - csv:101217854 870.922