Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01288 ATGGGGAAGGCAACGAGGTGGTTGAGGACCTTATTGGGGATGAAGAGAGAAAAGAACGCCGATCAGAATTCATGTGATAAAAGAGAGAAGAATCGCTGGAGTTTCTCCAAATCTGGGAAGGAATTCACTGGAAAAGTTCAGAATCTGCCACCGCCGCCGCCGAGAAAAGCGGTGGCGGACGCCGATTGGCAGAGATCCTATAATACAGAAACAGAGGAAGAGCGGAATGAGCATGCGATTGCCGTCGCCGCCGCGTCGGCTGCTGCTGCTGATGCCGCCATGGCGGCTGCTCAGGCGGCTGTGGCGGTTGTTAGGTTGACGAATCAAACCAGAGGAGGTGCTCTGTTCTATGGAGGGAAAGAGATTATGGCGGCTCTTAAAATTCAAAACGTGTTCAGGGGATTTTTGGCAAGAAAGGCGCTACGAGCGTTAAGAGGATTGGTCAAATTACAAGCTTTAGTTAGAGGATTTCTCGTTCGAAAACGAGCTGCTGCAACTTTACAGAGCATGGAAGCTCTGTTCCGAGCACAAACCACCGTCCGATCACAGCGTGCTCGTAGTCGTTCCAATAACGAAGAGAACAAATCCCTACCGGAGAAGTCGGCGGACATCGACGTCAGATCCCTTTACTCCAACGAAATTGAAGACCCAAAAATCGTGGAAATCGACAAACTCTTCAGAAAACCCAAATCAAGATCCCGTCGATTCAACAGCCTTCTCCCGGAGCTGGCGGACGACCGGGCATCGCCGTATCTCTGGACAATGGCGTCGCCGGCGAGATTCTCGGGAGGGGAGTGGTTTTTTGCGGGGGGAGAGGAATGTGGGCGGATGTCGACGCCGACGGCACACAGCACGCCACGAGTGGGGAATAGCGGGTGGGGGGCGGCGGCAGGGGTAGCGACGCCGGCGAGGAGCGTGTATGGGGAGGGGTATTTTCGTGGATATTCGAATTATCCGAATTACATGGCGAGTACGCAGTCATTTAAGGCGAAATTGAGGTCGCGAAGTGCGCCGAAACAGAGGCCGGAGGTATGGACGAAGAAAAGGGCGGCGTGGAATGAGGTGATAGGGCCGAGAAACAGCATTAGCAGCGTTAGGATGCAGAAAAGTTGCCGCGGAGAAGAAGAAGGATTTTATGAACTGTGA 1146 53.23 MGKATRWLRTLLGMKREKNADQNSCDKREKNRWSFSKSGKEFTGKVQNLPPPPPRKAVADADWQRSYNTETEEERNEHAIAVAAASAAAADAAMAAAQAAVAVVRLTNQTRGGALFYGGKEIMAALKIQNVFRGFLARKALRALRGLVKLQALVRGFLVRKRAAATLQSMEALFRAQTTVRSQRARSRSNNEENKSLPEKSADIDVRSLYSNEIEDPKIVEIDKLFRKPKSRSRRFNSLLPELADDRASPYLWTMASPARFSGGEWFFAGGEECGRMSTPTAHSTPRVGNSGWGAAAGVATPARSVYGEGYFRGYSNYPNYMASTQSFKAKLRSRSAPKQRPEVWTKKRAAWNEVIGPRNSISSVRMQKSCRGEEEGFYEL 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10183858 10185715 - CmaCh14G012880.1 Cma14g01288 308271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01288 381 Gene3D - 119 172 - -
Cma14g01288 381 PANTHER IQ-DOMAIN 5-RELATED 1 373 - -
Cma14g01288 381 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Cma14g01288 381 Pfam IQ calmodulin-binding motif 148 162 IPR000048 GO:0005515
Cma14g01288 381 Pfam IQ calmodulin-binding motif 123 142 IPR000048 GO:0005515
Cma14g01288 381 Pfam Protein of unknown function (DUF4005) 286 363 IPR025064 -
Cma14g01288 381 MobiDBLite consensus disorder prediction 15 36 - -
Cma14g01288 381 MobiDBLite consensus disorder prediction 15 58 - -
Cma14g01288 381 PANTHER - 1 373 - -
Cma14g01288 381 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Cma14g01288 381 SMART iq_5 143 164 IPR000048 GO:0005515
Cma14g01288 381 SMART iq_5 120 142 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma08g00741 Cma14g01288 CCT
Cma14g01288 Cma17g00759 CCT
Cma14g01288 Cma17g00759 ECH
Cma08g00741 Cma14g01288 ECH
Cma01g00093 Cma14g01288 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma10g00673 Cma-Chr10:3057232 Cma14g01288 Cma-Chr14:10183858 3.49E-83 dispersed
Cma14g01288 Cma-Chr14:10183858 Cma14g01742 Cma-Chr14:12751382 8.97E-35 dispersed
Cma15g01201 Cma-Chr15:7615369 Cma14g01288 Cma-Chr14:10183858 4.60E-23 dispersed
Cma01g00093 Cma-Chr1:425355 Cma14g01288 Cma-Chr14:10183858 8.07E-173 wgd
Cma11g00652 Cma-Chr11:3171146 Cma14g01288 Cma-Chr14:10183858 4.35E-84 wgd
Cma14g01288 Cma-Chr14:10183858 Cma17g00759 Cma-Chr17:6124935 1.52E-94 wgd
Cma14g01288 Cma-Chr14:10183858 Cma08g00741 Cma-Chr8:4454707 2.89E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01288 - - cmos:111457981 699.508