Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01290 ATGTTTTCGTCAATGAATCCTGTACGATTTTCCAGTTTGGTCTTCCTTCTATACTTGGCCCTTCTTCTTCAACATCATTCCCTCTGTTCCTCTTATCCCATGCCCTTAAATTGTACGGATACGACCCGTTTGTGCACCTCGTTTCTGGCCTTCGAGCCTCGCCCAAATCAGACCCTTTCTGTGATCCAGAGTATGTTCGACGTATTGCCTGAAGATGTCACTGTCGAAGGAAATGGTCGGGATTATGTGTTTATCAGGAAGAACTGCTCCTGTGCTTCTGGGTTGAAGAAATATATAACCAACACAACTCTTACCATCAAATCCAATCGAGGGTATGTCTATGACATAGTCATGGAAGCGTATGATGGGCTTGCGCTGTTGCCCAATACAACCCGAATGGCGAGGAACGGTGCTGTTGTGTCTTTGAGGCTGTTTTGTGCGTGTTCAAGTGGGTTGTGGAACTATTTGATGAGCTATGTGATGAGAGATGGCGATACCATAGAGTCTTTGGCTAGCCGATTTGGGGTTAGTATGGATAGCATTGAGTCGGTGAATGGAATTGAAAATCCAGGCAATGTCACTGTGGGTGCTTTGTATTATATTCCCTTGAATTCGGTTCCTGGCGATCCTTATCCATTGGAGACAGACATTTCTGCTGCTCCTGCTCCACCTCCTTCCTTTACTCTGAACAATTTCACAGATAATGCTGAAAACCCCAAACGTGATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTGATTTTAGTTGGCATAGTAAGTTATGCTTGCTTCAGGTGGTTGAAATGCTTTTCTAGATCAAGGAGTAGCCACTCCAAAGATCCCGGTGGCAAGGTTCCCCACAAGTTCCATATTCTTGGCACGTCAAGTTTCTGCTGTGCTTCAGGAAGGTACATTTGCTGCAGTTCTGCAGGTTGGAAGCAAGCCAACGGGGAGTCTAGTGACAACCAGAGTGCATTTCCGAAAGCCTATGTTATCGAGAGCAATGTATTTGACGTAGACAAACCTGTGGTTTTTTCATACGAAGAAATTTTTTCCTCAACCGATGGTTTCTCTGATTCGAGTCTACTTGGCCATGGAACTTATGGTTCAGTATATTATGGTATCCTGCGTGACCAGGAAGTTGCTATAAAAAGAATGACTGCAACAAAAACTAAAGAGTTCATGGCAGAGATGAAAGTCCTGTGCAAGGTTCATCATGCAAACCTGGTAGAATTGATTGGTTATGCAGCCAGTGAGGAGGAGCTCTTCCTTATTTATGAATATGCTCAAAAAGGTCCCCTCAAAAGTCATTTACATGATCCTCTGAACAAGGGGCATACGCCACTATCTTGGATTATGAGACTCCAAATTACTTTAGATGCTGCTAGAGGTCTCGAATACATTCACGAGCATACTAAAACTCATTACGTCCACAGAGATATCAAGACAAGCAACATCTTACTTGATGGTTCTTTTAGAGCAAAGATTTCTGATTTTGGGTTGGCCAAACTCGTTGGAAAAACAAATGAGGGTGAAGCTACTGTAACGAAAGTTGTCGGTACATACGGTTACCTGGCTCCTGAATATTTGAGTAATGGGCTTGCGACAACAAAAAGTGATGTATATGCTTTCGGTGTCATTCTTTTTGAGCTTATATCTGGAAAGGAGGCAATTATACGAACTGAGGGAACAACTATGAGAAATCCTGAAAGACGTTCACTAGCATCAGTTATGTTAGCTGTTCTTCGGAACGCTCCTGATTCTATGAATATGGCAAGTTTGAAAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCTCATGACTGTCTATTCAAGGTGGCCATGTTGGCAAAGCAGTGTGTGGATGAGGATCCCATCTTACGACCCGACATGAAGCAAGTCGTAATATCCTTGTCGCAGATCCTACTATCTTCGGTCGAATGGGAAGCAACTCTAGCTGGTTATGGGTATTCGAGGTTTCCGAAGGGGGTGCTACCGGCGGCGATCAAGATGTCGGTGAGAAGGAAATTTGGGAGAAAACCATTGAGGGACTTAGCGAACCACAATTACGGCCGAATTTCCTCCAAATCTGTCACTACAGCCAAGAGAAAGGAAGATGATAATAGGTTTAAGGTTGAAGAGCAAGATGATGCTCTCGATCGTCTCCTTCTAGTTCAGTCTGATCTCTCGGCGCTCACTAACCAGCTTCACCATACTGTACTGAATTGGCAGATCGATGAACTCGTTGTCAAAGCATTTGAGCTGAAGAAAATAGACGAACAAGGGAGAAAAGAGATCGAATCTTTCACTCATGTCTTGTATGATATGCTATCTTCTTTGAAGCCCTGGGTCCCCAGGTTTCAGATGGCGTTCTCTCGTTCATCAGAAGATTCTGATGATGGTATAGGACAACCGTTGGCTAGTGAAAGCAATGCTTTGGTTAATGATACGGAAAGCAACGTTATTGATAGCCCAGACCATGCTGAAGTTCAAGATCTGATCTCCCCTTCATCCCTTGTATCGTGGCGTGCTGGATGCAATATTGAGAGGGGAAGACAATTGTTTTTACTCACTCCTCTTCCTATTTCTAAATCACTCTCATCGAAACATGCAGCATACTCTAAATCTGTACTTGGCGGAATTACTTCGGGTACACTTAAGGGTGCACAACCATGTTTTTTTGCATGTGGAGATTTAAACGAGAATCTACTTGAAGGTAATGGAGTTGAGCCTAGTGTTAGTAAACCATTTGGGTCCGATTTAACCAAACTGGGGGACAATTTGCTAGAGGGTAATGAACCTCAGCCTAGTGGTGCTGAGCCTTCTGGGACTGATTTAACACAAGTAGGGACAATTCATCAGCGACGATTTGCTTCCCCACCATTCTTATCAATAAAGAGGAATTGCTCTATGTTAGTTATGACACCATGCTTAAAAATGTCGCCTCCAAAATCTTGTGTGCTGCTCGAACCCATTTCAGAATCGTCACAAAAAGACAAAAAAAGGATTTACAAGGCCACACCTTTTCCCGTTGGCGTTCATGATTCCTCTTCTGGCAGTGACACGTCTGATGGGTTGGCTTTGAAGTATCCAGAACTCCTAGGAATTCAACAGGCTCACAAATCAGGAATTAAAAAGAAGGTTGAAGCTTCTCCGGACTGGTTTATGTCACCTCCGAAAACCTGTGTTTTACTGGAGCCGTCTGATTCTCATTCGGTGGAAAGTGCTAATTGTGATGGATGTTACTACGAAGCCAAGAAATCTTTCACCCACCAAGGTAACACTCCCATGTTGATGGAATGTGAAAGTGTATTCCCGGTTAGCAAACGTGCTGGTGAGGAAACTCTTAAGAAAGAACTCTGGGTGAAATTTGAAGCAGCATCAGCCAATCCATTTCGTTGTGATCAATCTCTCCAAAAGACATCAAAGGGTTTCCTGGACTTGTTGGATGAGGTTTCATGTGATTAG 3486 43.32 MFSSMNPVRFSSLVFLLYLALLLQHHSLCSSYPMPLNCTDTTRLCTSFLAFEPRPNQTLSVIQSMFDVLPEDVTVEGNGRDYVFIRKNCSCASGLKKYITNTTLTIKSNRGYVYDIVMEAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIESLASRFGVSMDSIESVNGIENPGNVTVGALYYIPLNSVPGDPYPLETDISAAPAPPPSFTLNNFTDNAENPKRDPPYIWIVGSLGIILVLILVGIVSYACFRWLKCFSRSRSSHSKDPGGKVPHKFHILGTSSFCCASGRYICCSSAGWKQANGESSDNQSAFPKAYVIESNVFDVDKPVVFSYEEIFSSTDGFSDSSLLGHGTYGSVYYGILRDQEVAIKRMTATKTKEFMAEMKVLCKVHHANLVELIGYAASEEELFLIYEYAQKGPLKSHLHDPLNKGHTPLSWIMRLQITLDAARGLEYIHEHTKTHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAFGVILFELISGKEAIIRTEGTTMRNPERRSLASVMLAVLRNAPDSMNMASLKDQVDPSMMDLYPHDCLFKVAMLAKQCVDEDPILRPDMKQVVISLSQILLSSVEWEATLAGYGYSRFPKGVLPAAIKMSVRRKFGRKPLRDLANHNYGRISSKSVTTAKRKEDDNRFKVEEQDDALDRLLLVQSDLSALTNQLHHTVLNWQIDELVVKAFELKKIDEQGRKEIESFTHVLYDMLSSLKPWVPRFQMAFSRSSEDSDDGIGQPLASESNALVNDTESNVIDSPDHAEVQDLISPSSLVSWRAGCNIERGRQLFLLTPLPISKSLSSKHAAYSKSVLGGITSGTLKGAQPCFFACGDLNENLLEGNGVEPSVSKPFGSDLTKLGDNLLEGNEPQPSGAEPSGTDLTQVGTIHQRRFASPPFLSIKRNCSMLVMTPCLKMSPPKSCVLLEPISESSQKDKKRIYKATPFPVGVHDSSSGSDTSDGLALKYPELLGIQQAHKSGIKKKVEASPDWFMSPPKTCVLLEPSDSHSVESANCDGCYYEAKKSFTHQGNTPMLMECESVFPVSKRAGEETLKKELWVKFEAASANPFRCDQSLQKTSKGFLDLLDEVSCD 1161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10198619 10209052 + CmaCh14G012900.1 Cma14g01290 308273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01290 1161 ProSitePatterns Protein kinases ATP-binding region signature. 368 389 IPR017441 GO:0005524
Cma14g01290 1161 Pfam LysM domain 159 196 IPR018392 -
Cma14g01290 1161 SMART serkin_6 362 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01290 1161 PANTHER BNAA06G02020D PROTEIN 36 661 - -
Cma14g01290 1161 Pfam Protein tyrosine and serine/threonine kinase 367 642 IPR001245 GO:0004672|GO:0006468
Cma14g01290 1161 SUPERFAMILY Protein kinase-like (PK-like) 344 644 IPR011009 -
Cma14g01290 1161 Gene3D Phosphorylase Kinase; domain 1 335 433 - -
Cma14g01290 1161 ProSiteProfiles LysM domain profile. 157 201 IPR018392 -
Cma14g01290 1161 ProSiteProfiles Protein kinase domain profile. 362 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cma14g01290 1161 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 36 661 IPR044812 GO:0019199|GO:0045087
Cma14g01290 1161 Gene3D Transferase(Phosphotransferase) domain 1 435 657 - -
Cma14g01290 1161 CDD LysM 158 201 IPR018392 -
Cma14g01290 1161 Gene3D LysM domain 154 207 IPR036779 -
Cma14g01290 1161 SMART LysM_2 158 202 IPR018392 -
Cma14g01290 1161 MobiDBLite consensus disorder prediction 930 952 - -
Cma14g01290 1161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Cma14g01290 1161 SUPERFAMILY LysM domain 157 202 IPR036779 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cma01g00095 Cma14g01290 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma04g01380 Cma-Chr4:7059744 Cma14g01290 Cma-Chr14:10198619 2.13E-42 dispersed
Cma07g00748 Cma-Chr7:3322708 Cma14g01290 Cma-Chr14:10198619 5.82E-73 dispersed
Cma14g01290 Cma-Chr14:10198619 Cma12g01250 Cma-Chr12:9778780 1.09E-60 dispersed
Cma14g01771 Cma-Chr14:12845873 Cma14g01290 Cma-Chr14:10198619 3.47E-57 dispersed
Cma18g00898 Cma-Chr18:7752347 Cma14g01290 Cma-Chr14:10198619 9.75E-47 dispersed
Cma04g01752 Cma-Chr4:8816601 Cma14g01290 Cma-Chr14:10198619 4.45E-111 transposed
Cma11g01810 Cma-Chr11:12102734 Cma14g01290 Cma-Chr14:10198619 1.98E-86 transposed
Cma01g00095 Cma-Chr1:434823 Cma14g01290 Cma-Chr14:10198619 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69088 PF07714 PK_Tyr_Ser-Thr 1.90E-48 CL0016 Cma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01290 - - csv:101213624 1186.4