Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01328 ATGGAGAATCTCAGGACTCCATTTAGGGGTATTGTGGATGATATCAGAGGAAGAAAAGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGAATCGGAATTTTGGCCCCAACTGCCTACGTTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTCGGTGCGCAACTGAGCCGAGATACAGATGGAAGCTTGAGCGCAGTAGAAACATTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCAATTCTTGGTGGGCAGCCTCTCCTAATTGTAGGTGTTGCAGAACCTACAATTATTATGTATACCTATTTGTACAATTTTAGCAAGGATAGGAAAGATATAGGGGGAGACCTCTTCTTGGCTTGGGCCGGATGGGTTTGTGTCTGGACAGCCCTGTTGCTGTTTCTTCTTGCTATATTCAATGCTTCCAGACTAATCAACAGATTTACAAGGATTGCAGGGGAGCTTTTTGGCATGTTAATCTCCGTTCTGTTCATTCAAGAAGCTATTAAGGGAGTGTTGAGTGAATTTGAAGTTCCCCATGCTGAGGATAAACGTTTAGAAAAATATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATCATATTTACTTTTGGCCTTCTCTATACTGCCTTGAAGAGCAGAAAGGCAAGATCATGGTTGTATGGGACAGGCTGGCTAAGGAGTTTCATTGCAGACTACGGAGTTCCTCTGATGGTTCTAGTATGGACTGCACTATCATTTGCTGTACCAAGCAAAGTCCCCACTGGAGTTCCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCTCTGCACCATTGGACAGTTGTCATGGACATGGGGAAGATACCTCCTGCATACATTTTTGCGGCCTTTATTCCTGCTGTAATGATTGCAGGACTTTATTTTTTTGATCATAGTGTTGCATCACAGCTGGCACAGCAAAAGGAGTTTAATCTCAAGAACCCTTCTGCATACCACCACGACATCCTGTTGCTGGGATTTATGACGTTGCTTTGCGGGTTAATCGGGCTTCCTCCTTCAAATGGGGTTTTGCCACAGTCTCCCATGCACACCAAGTGTCTTGCAACTCTCAGAAGGCGTTTGATGCGAAGGAAGATGGTAGAAAGTGCAAAGGAAGGCCTAAAAAGGAAAGCTAGTGATTCCGAAATCTACGGTCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAATTACGACATCAGTAGTCAAAGAGCTGAAAGATTTGAAGGAGGCAATCATGAAAGCTGATACTAATCATGAAAACACAAGGGATACATTTGACCCAGAGAAGCATATTGATGCTTATCTTCCTGTTCGAGTGAACGAGCAAAGATTGAGCAATCTGCTGCAATCACTTCTGGTGGCAGCATCAGTATTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTCTGGGGATATTTCGCGTACATGGCCATCGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGACGTTACAAGGTCCTAGAAGGCTTTCATGCTTCCTTTGTGGAGTCTGTGCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTGTATTTCCTCATTTGTTATGGAGTGACTTGGATCCCCATAGCTGGAGTGTTGTTTCCTTTGCCTTTCTTCCTCCTCATTGGCATAAGACATCGCATCCTTCCCAAGCTACTCCAACCCCGTTATTTGCAGGAGCTCGATGCAGCTGAGTATGAAGAACTAACCGGTACTCCAACTGTCTCGCTTAGCCTTTCTATCAAGGAAATGAATACCTCTCAAATGGTTAATAATGAAGATGAAGTTGAAATATGTGATGCTGAAATACTAGATGAGTTGACAACCCACAGAGGGGAGTTGAAGGTTAGAACTAAAAGCTTCAACGAGGATAGACAGGGTCAGATCCATCCCGACTAA 1995 43.41 MENLRTPFRGIVDDIRGRKACYKQDWVDGRLSGIGILAPTAYVFFASALPVIAFGAQLSRDTDGSLSAVETLASTAICGILHSILGGQPLLIVGVAEPTIIMYTYLYNFSKDRKDIGGDLFLAWAGWVCVWTALLLFLLAIFNASRLINRFTRIAGELFGMLISVLFIQEAIKGVLSEFEVPHAEDKRLEKYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVLVWTALSFAVPSKVPTGVPRRLQSPLAWQSTSLHHWTVVMDMGKIPPAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKNPSAYHHDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKEGLKRKASDSEIYGQMQAVFLEMESSPITTSVVKELKDLKEAIMKADTNHENTRDTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICYGVTWIPIAGVLFPLPFFLLIGIRHRILPKLLQPRYLQELDAAEYEELTGTPTVSLSLSIKEMNTSQMVNNEDEVEICDAEILDELTTHRGELKVRTKSFNEDRQGQIHPD 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10407572 10413224 + CmaCh14G013280.1 Cma14g01328 308311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01328 664 Coils Coil 421 441 - -
Cma14g01328 664 Gene3D Helical hairpin bin 18 60 - -
Cma14g01328 664 PANTHER BORON TRANSPORTER 6-RELATED 1 663 - -
Cma14g01328 664 Pfam HCO3- transporter family 199 373 IPR011531 GO:0006820|GO:0016021
Cma14g01328 664 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016021
Cma14g01328 664 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016021
Cma14g01328 664 PANTHER BORON TRANSPORTER 4-RELATED 1 663 - -
Cma14g01328 664 PANTHER ANION EXCHANGE PROTEIN 1 663 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma12g00320 Cma-Chr12:1636781 Cma14g01328 Cma-Chr14:10407572 0 dispersed
Cma13g00886 Cma-Chr13:7162122 Cma14g01328 Cma-Chr14:10407572 0 dispersed
Cma14g00951 Cma-Chr14:4928445 Cma14g01328 Cma-Chr14:10407572 0 dispersed
Cma14g01328 Cma-Chr14:10407572 Cma05g00405 Cma-Chr5:1781739 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01328 K24194 - csv:101210964 1161.36