Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cma14g01360 | ATGGCCTTTCGCCTAATGTTCTGCTGTGGAATTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTGTTTTCATTGAAGGAATTACACTCGGCCACAAATAATTTTAATTACGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTATTGGGGTCAGCTGTGGGATGGATCACAAATTGCAGTTAAGAGGTTGAAGGCTTGGAGCAACAAGGCAGACATGGAGTTCTCTGTGGAAGTCGAGATACTGGCCCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGTGCCGAAGGGCAAGAGCGCTTGATCGTGTACGACTACATGCCTAATCTAAGTCTACTCTCCCATTTACATGGACATCACGCATCAGAATGCCATCTCGATTGGAAACGTCGCATGAAAATCGCGGTTGGATCTGCCGAGGGAATTGCTTATCTTCACCACCAAGCAACTCCCCACATCATTCATCGAGATATCAAAGCTAGTAATGTTTTGCTAGATCCAGATTTCCAAGCTCGTGTCGCCGACTTTGGATTCGCAAAACTCATCCCCGACGGTGCAACACATGTAACTACAAGAGTCAAGGGCACACTCGGATACCTCGCACCTGAATATGCTATGTTAGGTAAGGCATCAGAGAGTTGTGACGTATACAGCTTCGGCATTCTCCTTCTTGAGCTTGCCACCGGCAAGAGACCTCTTGAGAAGTCGAGTGCAACAACGAAACGCACAATCGTAGATTGGGCATTACCGTTAGTAGTTGAGAAAAAAATTAACGAACTTGCAGACCCGAAGCTAAATGGAGATTACAATGCAGACGAGCTAAAGAGAGTCGTCCTTGTTGCACTCAGATGCTCCCATTCACGGCCGGAGAAACGACCGATCATGGTCGAGGTGGTAGAGCTGCTAAAAGGAGAATCAAAAGAGAAGGTAGGTAAATTAGAAGATGATGAACTGTTCAAGAGCCATGAAGTAGATGCACAAACAACAGAAATAGCAGCTGGCGAAGATAGCTCAGAGTTCATATCAGAAGAAAAGGATTCAACACAAAACCCCACATGA | 1086 | 45.67 | MAFRLMFCCGIGSDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKAWSNKADMEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHASECHLDWKRRMKIAVGSAEGIAYLHHQATPHIIHRDIKASNVLLDPDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKRPLEKSSATTKRTIVDWALPLVVEKKINELADPKLNGDYNADELKRVVLVALRCSHSRPEKRPIMVEVVELLKGESKEKVGKLEDDELFKSHEVDAQTTEIAAGEDSSEFISEEKDSTQNPT | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 10571451 | 10574900 | + | CmaCh14G013600.1 | Cma14g01360 | 308343 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cma14g01360 | 361 | ProSiteProfiles | Protein kinase domain profile. | 40 | 328 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g01360 | 361 | SMART | serkin_6 | 40 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g01360 | 361 | PANTHER | BNAA05G14800D PROTEIN | 1 | 358 | - | - | |
Cma14g01360 | 361 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 115 | - | - | |
Cma14g01360 | 361 | ProSitePatterns | Protein kinases ATP-binding region signature. | 46 | 68 | IPR017441 | GO:0005524 | |
Cma14g01360 | 361 | SUPERFAMILY | Protein kinase-like (PK-like) | 23 | 311 | IPR011009 | - | |
Cma14g01360 | 361 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 329 | - | - | |
Cma14g01360 | 361 | MobiDBLite | consensus disorder prediction | 333 | 361 | - | - | |
Cma14g01360 | 361 | Pfam | Protein kinase domain | 41 | 308 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cma14g01360 | 361 | PANTHER | OS01G0750732 PROTEIN | 1 | 358 | - | - | |
Cma14g01360 | 361 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 162 | 174 | IPR008271 | GO:0004672|GO:0006468 | |
Cma14g01360 | 361 | CDD | STKc_IRAK | 46 | 313 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cma01g00153 | Cma14g01360 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cma14g01360 | Cma-Chr14:10571451 | Cma15g00198 | Cma-Chr15:963133 | 1.49E-91 | dispersed | |
Cma16g00164 | Cma-Chr16:716404 | Cma14g01360 | Cma-Chr14:10571451 | 8.94E-145 | transposed | |
Cma01g00153 | Cma-Chr1:676115 | Cma14g01360 | Cma-Chr14:10571451 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69089 | PF00069 | Pkinase | 1.50E-44 | CL0016 | Cma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cma14g01360 | - | - | csv:101212993 | 662.914 |