Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01465 ATGGGGAGTGATTTGTTTAGCGAATCTGAAACGTGGGTTTCTTCTGTGAACGGAATTCGAGAGGAACCAGATGATGAAATCTCCATTGAAGTAGAGGAAGGAGTTGTGTCGGATTCGGATTTGGATGAGTCGGATCAAATGGGAGTGAAGATGAAGATGAAGAAGAGGAATCAGGTTTTGCTTGAGGGATTTGTGGAGGATGAGGATGATTTGATGAGGACGAAGAGCTTAACGGATGAGGATCTTGATGAGCTTAAGGGATGTGTGGATCTAGGGTTTGGTTTTAGCTACGATGAGATTCCGGAGCTCTGCAACACTCTGCCGGCGTTGGAGCTCTGTTATTCTATGAGTCAAAAGTACATGGACGATCACCAGAAGTCGCCGGTGACCTCACCGGCACAGGCAATACCGGTGGATTCGTGTTCGTCTGTGTCGAGTCCGATTGCAAATTGGAAGATCTCCAGTCCTGGTGATCATCCTGAAGATGTTAAGGCAAGGCTCAAATTTTGGGCCCAAGCAGTGGCATCCTTATGGTCGACGACGTTGCATGCGTCTGAGAAAGATGGAATGAACGAACGAACGGATCGGTTGACGAGTCTGACTTACGAAGAAGGAGAAGAAAAAGAAGAAGAATGTGTCAGCATAGTTCATGAGTTGATCAGTTCAAGTATTGAAAAAGTGATATTACAAAAGGATTATCCAATTCTATATGAGGTTGAACCTATTGGTTTCTCGTCGATGTTGAGCACGAGCACCATTAGGAATGCTTCGGCGTACCTCAAATTCGTTGCTTATGGCTTCTCTTCATACTCTTCCAGCACTTCATCGACCACCAAGCGCACTGCCATAGCTCCAAGAGCTCTTGCAAGAAGACCCACTTCGCGAACTGCCCTAATCCCTCGGGCTTTGGACACAGATGCCGTCAGTTCAGTATGTTCTTTACTTTCAAACAAAGATCACCAAACAACTAATCTCGAACTTGACCATTTATTGAAAAGATTCAAAGAAACCTTGAGCTCGGATTTCGTTCTTCAAATTCTGATGAATTATAGGCTGTTCGGTAGGGCTAAAACGCTAGAATTCTTCTCCTGGTCTGGATTGCAAATGGGGTATCGGTTTGATGAGTCCGTGGTTGAGTACATGGCTGATTTCTTAGGTAGAAGGAAACTGTTCGATGATATGAAATGTCTTTTGGTGACGGTGTCGTCTTATAAAGGTCGGATTTCTTGTCGAACATTTTCAATTTGTATCAGATTTTTGGGTAGGCAAGGGAGGGTTAGAGAAGCGCTTTGCTTATTTGAAGAAATGGAGCCAACATTTGGGTGTAAACCTGATAATCTGGTCTTTAATAACATGCTTTATGCACTTTGTAAGAAGGAACCAACAGGGGAATTGATTGATACTGCTCTAACAATTTTCAGAAGAATTGAATTGCCTGATAAATATTCATACAGTAACATAATTATTGGATTATGTAAATTTGGTAGGTTTGGTACTGCTGTTGAAGTGTTTGATGAAATGCGTAGGGCAAGTTTGGTACCTACCCGATCTGCTGTGAACATTCTCATTGGCGATTTGTGTTCATTGAGTGCCAAAGAAGGGGCTGTAGAACAAGTTAGGGTCAGAAGTACTCGTCGACCTTTTACCGTCCTAGTTCCAAATGTGAATCCAAAGAGCGGAGCCATTGAACCTGCAGTTGGAGTTTTTTGGGCAGCTAATAGGATGGCTTTAGTTCCAAGTGCTTTTGTAATAGTTCGGCTCATCTCGGAGCTTTGTCGATTAGGCCAAATGCAAGAAGCAATTAGAGTATTGAAGGTTGTCGAGGTTAACAAGCTAAGGTGTACTGAAGAGTGTTATTCCATTGTGATGCAAGCATTGTGTGAACATCGTCGAGTAGACGAAGCTAGTGATCTGTTTGGGAGGATGCTTTCTCAGGATATGAAGCCAAAGTTGGCTATTTATAATTCTGTTATTTGTATGCTATGCAAATTAGGAAATTTGGATGATGCTGAAAGGGTCTTCAAGATTATGAACAGGAAAAGATGTGTCCCAGATCATGTTACTTACTCGGCGCTAATCCATGCCTACGGTGAAGCTAGGAATTGGTCAGCGGCCTACAGTTTATTGAAGGAAATGTTGAGTTTAGGCATATCCCCGCATTTTCATGTGTATAGTATAGTGGATAAACTAATGAGGGAAGATGGGCAAACTGATCTGTGCTTGAAGCTGGAAATGAAGTGGGAATCCCAAATTTTGCAGAAACTTTGTAAACAAGGACAACTGGGGGCTGCGTATGAAAAGCTAAAGTCAATGCTTGAAAAGGGTTTTTATCCTCCTATCTATGTAAGAGATGCTTTCGAGAGTGCGTTTCAAAAGAAGGCCATTTTCGTAGCTACCGCATCCCTCCCATTACCTCACGCTCGCGCCACGCTGCCGCTATTCCTGCCTGACGCCGTCTCAGCAGCTGCTGCTGCACTCTCATCTGCCCCAGGTCTGCCTTGCGACAAAATCGCCGCCGTCCCCTCCCTCTCTTCCAGCAAGCGGAGTTACTTAAGCGGTGCCGCCATGGATGAGGTTTGCGAGGGTAAGGACTTTTCGTTCCCTAAGCACGAGGAGGTGGTGCTTGAGTATTGGTCTGACATCAGGGCATTTGAGACCCAGCTTGAGCGCACAAAGGACCTTCCTGAGTATATTTTTTATGATGGCCCTCCGTTCGCCACTGGTCTTCCACATTATGGTCACATCTTGGCGGGAACCATCAAGGACATTGTCACCCGGTATCAGGTTATGACCGGTCATCACGTGACTCGTCGCTTTGGATGGGACTGCCACGGATTGCCTGTTGAGAACGAGATTGATCAGAAGTTGGGGATCAAGAGGAGAGACGATGTGTTGAAGATGGGGATTGACAAGTACAATGAAGAATGCAGAAGTATAGTCACGAGATATGTGGGGGAGTGGGAAAAAATCATCACGCGTACTGGTCGATGGATTGACTTTAAAAACGACTATAAGACTATGGACTTGAAATTCATGGAGAGTGTTTGGTGGGTTTTTTCTCAGCTCTTCGAGAAGGGTCTTGTCTATAAAGGTTTCAAGGTAACTACCCGCTTAGAGTTGTTTGATGCGGGCAAGGTATGGGGTCTATGGTCTGCCACTCGAGAGGAGCTTAGAGGTCATGTAAGGAAGGTCATGCCATATAGTACTGGTTGCAAGACGCCACTTTCAAACTTCGAAGCTGGTCAAAGCTATAAGGATGTCCCTGATCCTGAAATCATGGTAACTTTTCCAGTACTCGGGGATCCGCAAAATGCAGCTTTTGTGGCTTGGACAACAACTCCATGGACCCTTCCGAGTAATCTTGCCCTTTGTGTTAATGCAAATTTCGTCTATGTGAAGGTTCGCAACAAGGCATCTGGAAAAGTTTATGTGGTTGCTAAATCCCGATTGTCAGCTCTACCTGTTGAGAAACAAAAAGTGAATGCACCAAATGGTTCTACCGATGTTGTTAACAAGTCAAATCCTAAGAAAAAAGGTTCCTCAAATTCAAAAACAGAGAACTCAGTGGAGGACTCATATGAGGTATTGGAGGAAGTATTGGGAGCTTCTCTTGTGGGTAAAAAGTACGAGCCACTGTTTGATTACTTTAAAGAGTTCTCTGATGTGGCATTTAGAGTTGTTGCAGATAATTATGTAACTGATGATAGTGGTACGGGTATTGTCCATTGTGCTCCTGCATTCGGTGAAGATGACTATCGTGTTTGCATTGAGAACCAAGTGATCCATAAGGGCGAGAATCTGATTGTTGCAGTCGATGACGATGGTTGCTTTACAACAAAGATTACTCAATTTTCTGGGCGTTACGTCAAGGATGCAGACAAGGATATAATTGAAGCCGTGAAGGAGAAAAGGTTCCATAATTGGCTAGAGAATGCGAGAGATTGGGCTGTCAGCCGTAGTAGATTTTGGGGAACACCACTCCCTGTCTGGGTTAGCGAGGATGGAGAGGAAATACTGGTCATGGATTCAATTGAGAAACTTGAACAGCTTTCTGGTGTCAAGGTGTTTGATCTGCACCGGCACAAGATTGATCACATTACTATTCCATCTAGAAGAGGTCCTGAATATGGTGTGCTTCAGAGGGTAGATGACGTGTTTGATTGCTGGTTCGAGAGTGGGTCTATGCCATATGCATATATTCATTATCCATTTGAAAACGTTGAGCTTTTTGAGAAAAACTTTCCTGGGCACTTTGTGGCAGAAGGGCTTGATCAAACTCGTGGATGGTTCCAAGGATACAATCTTTTCTTCAACTATGATGCTTGCTATTTGGTGGATAGTTTGGGATGCCAGAAATGGGAAAATTTAGATTATAGGGTGGTTTTGCTTGATGCTTGGGATAGAGTGCATCACCTTGGAATTTTTCAGTTAAGAAACAAACTCATTCTCTCTCATGCACCAAAATTTGGGTTTATATTCGTGGATTCTTGGGCGGCGTCTCTTTTTCCAATGTCTGCCCTTTACTTTTGCAGGTTCTATACTCTCATGGTTCTATCTACTGCTTTATTTGGGAAGCCCGCATTTAGGAACCTTATTTGTAATGGCCTTGTCCTTGCTGAGGATGGAAAGAAGATGAGCAAAAGGTTGAAAAATTATCCTTCACCAATGGAAATCATAAATGATTATGGAGCTGATGCTCTGAGATTATATCTTATAAATTCTCCAGTTGTACGTGCAGAGACTTTACGCTTCAAGAAGGAGGGCGTTTTTGGTGTTGTCAGGGATGTTTTCCTTCCATGGTATAATGCCTATAGATTCCTTGTTCAGAACGCCAAGAGGCTCGAAATTGAGGGATTTGCACCATTTTCTCCCGTAGATCAAGCTACCCTTCAAAAGTCATTCAATGTGCTTGACCAATGGATAAACTCTGCCACCCAGAGTTTAGTATATTTTGTCAGAAAAGAAATGGATGGGTACCGACTGTACACGGTAGTTCCATATCTTCTAAAGTTTCTTGACAACCTTACAAATATTTATGTGAGGTTCAACCGCAAGAGACTAAAGGGCCGTACTGGGGAAGAAGACTGCAGGATAGCACTCTCTACTCTGTACCATGTCCTTTTAACATCTTGTATGGTCATGGCTCCATTTACACCATTTTTCACCGAAGCTTTATATCAAAACTTACGGAAGGTTTCTGATGGGTCAGAGGAAAGCATTCATTACTGTTCTTATCCTCAGGAAGGAGGAAAGAGAGGTGAAAGAATTGAAGAAAGTGTTACAAGGATGATGACAATTATTGATCTTGCTCGCAACATTCGGGAGCGTCATAACAAACCTCTTAAAACTCCTTTGAGAGAAATGATAGTGGTTCATCCTGACAAAGATTTTCTTGATGACATAGCCAGAAAGCTTAGAGAGTACGTTCTAGAGGAATTGAACATAAGATCTCTTATCCCATGCAATGATACGTTGAAGTATGCATCTCTTCGTGCTGAGCCAGATTTTAGTGTGCTGGGTAAGCGTCTTGGAAAAGCTATGGGAGTCGTGGCAAAGGAAGTCAAAGCCATGTCACAGGAAGATATCTTGGCTTTTGAGAAAGTGGGAGAAGTTACTATTGCTACTCATTGTTTAAGGTTATCTGACATAAAGGGTAAGAAAGGCTTCTCTGTGCATTGTTGGGGGAATCAAGGCATTGATGTTGTCGGTATCCCGTTGGTTGTCCGTGATTTCAAACGACCTGATGGTATGACAGACAAGGAAATGGATGCTGCTGGGGATGGTGATGTACTAGTGATTTTGGATCTACGTCCAGATGAATCTCTATTCGAGGCTGGTGTTGCTCGTGAGATTGTTAATAGAATCCAGAAGTTGAGAAAGAAAGCTGCCCTTGAACCTACCGACTCCGTAGAGGTGTATTTTCGATCACAAGATGAGGATGCATCAGTTGCGCAAAGAGTTTTAAATGCACAGGAACTATACATAAGCGAGGCAATCGGTTCACCCTTGCTTCCGTCTGCTTCGTTGCCTTCACATGCAGTATTTGCAGCATCTTTTGCTCTCTCTCTTTCGATCTCTGTCTCTCTCGCTCACATAAGCATGAGAACAACTATAGGTAACGAGAAATTCGCCCGAGCACTTGAGGTCTACCTGCTCTCAAGAGATCTCTCCAACTTGAAGACTGAGTTCTCTGGAAATGGCAAGATGAGAGTTGATTACATTGATGGCCAGCCGGGAGTGGAAGTGGCACTGGGAGAGCATGTTTTCTTGACGGCCGGCGACAAGTTTCTGAAGGCCAAGTCTTCATAA 6309 43.59 MGSDLFSESETWVSSVNGIREEPDDEISIEVEEGVVSDSDLDESDQMGVKMKMKKRNQVLLEGFVEDEDDLMRTKSLTDEDLDELKGCVDLGFGFSYDEIPELCNTLPALELCYSMSQKYMDDHQKSPVTSPAQAIPVDSCSSVSSPIANWKISSPGDHPEDVKARLKFWAQAVASLWSTTLHASEKDGMNERTDRLTSLTYEEGEEKEEECVSIVHELISSSIEKVILQKDYPILYEVEPIGFSSMLSTSTIRNASAYLKFVAYGFSSYSSSTSSTTKRTAIAPRALARRPTSRTALIPRALDTDAVSSVCSLLSNKDHQTTNLELDHLLKRFKETLSSDFVLQILMNYRLFGRAKTLEFFSWSGLQMGYRFDESVVEYMADFLGRRKLFDDMKCLLVTVSSYKGRISCRTFSICIRFLGRQGRVREALCLFEEMEPTFGCKPDNLVFNNMLYALCKKEPTGELIDTALTIFRRIELPDKYSYSNIIIGLCKFGRFGTAVEVFDEMRRASLVPTRSAVNILIGDLCSLSAKEGAVEQVRVRSTRRPFTVLVPNVNPKSGAIEPAVGVFWAANRMALVPSAFVIVRLISELCRLGQMQEAIRVLKVVEVNKLRCTEECYSIVMQALCEHRRVDEASDLFGRMLSQDMKPKLAIYNSVICMLCKLGNLDDAERVFKIMNRKRCVPDHVTYSALIHAYGEARNWSAAYSLLKEMLSLGISPHFHVYSIVDKLMREDGQTDLCLKLEMKWESQILQKLCKQGQLGAAYEKLKSMLEKGFYPPIYVRDAFESAFQKKAIFVATASLPLPHARATLPLFLPDAVSAAAAALSSAPGLPCDKIAAVPSLSSSKRSYLSGAAMDEVCEGKDFSFPKHEEVVLEYWSDIRAFETQLERTKDLPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYQVMTGHHVTRRFGWDCHGLPVENEIDQKLGIKRRDDVLKMGIDKYNEECRSIVTRYVGEWEKIITRTGRWIDFKNDYKTMDLKFMESVWWVFSQLFEKGLVYKGFKVTTRLELFDAGKVWGLWSATREELRGHVRKVMPYSTGCKTPLSNFEAGQSYKDVPDPEIMVTFPVLGDPQNAAFVAWTTTPWTLPSNLALCVNANFVYVKVRNKASGKVYVVAKSRLSALPVEKQKVNAPNGSTDVVNKSNPKKKGSSNSKTENSVEDSYEVLEEVLGASLVGKKYEPLFDYFKEFSDVAFRVVADNYVTDDSGTGIVHCAPAFGEDDYRVCIENQVIHKGENLIVAVDDDGCFTTKITQFSGRYVKDADKDIIEAVKEKRFHNWLENARDWAVSRSRFWGTPLPVWVSEDGEEILVMDSIEKLEQLSGVKVFDLHRHKIDHITIPSRRGPEYGVLQRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFQGYNLFFNYDACYLVDSLGCQKWENLDYRVVLLDAWDRVHHLGIFQLRNKLILSHAPKFGFIFVDSWAASLFPMSALYFCRFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPMEIINDYGADALRLYLINSPVVRAETLRFKKEGVFGVVRDVFLPWYNAYRFLVQNAKRLEIEGFAPFSPVDQATLQKSFNVLDQWINSATQSLVYFVRKEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRTGEEDCRIALSTLYHVLLTSCMVMAPFTPFFTEALYQNLRKVSDGSEESIHYCSYPQEGGKRGERIEESVTRMMTIIDLARNIRERHNKPLKTPLREMIVVHPDKDFLDDIARKLREYVLEELNIRSLIPCNDTLKYASLRAEPDFSVLGKRLGKAMGVVAKEVKAMSQEDILAFEKVGEVTIATHCLRLSDIKGKKGFSVHCWGNQGIDVVGIPLVVRDFKRPDGMTDKEMDAAGDGDVLVILDLRPDESLFEAGVAREIVNRIQKLRKKAALEPTDSVEVYFRSQDEDASVAQRVLNAQELYISEAIGSPLLPSASLPSHAVFAASFALSLSISVSLAHISMRTTIGNEKFARALEVYLLSRDLSNLKTEFSGNGKMRVDYIDGQPGVEVALGEHVFLTAGDKFLKAKSS 2102
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11151801 11175335 + CmaCh14G014650.1 Cma14g01465 308448

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01465 2102 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 685 719 IPR002885 -
Cma14g01465 2102 Pfam PPR repeat family 479 528 IPR002885 -
Cma14g01465 2102 Pfam PPR repeat family 651 696 IPR002885 -
Cma14g01465 2102 Gene3D HUPs 1375 1460 IPR014729 -
Cma14g01465 2102 TIGRFAM PPR: pentatricopeptide repeat domain 412 445 IPR002885 -
Cma14g01465 2102 TIGRFAM PPR: pentatricopeptide repeat domain 482 515 IPR002885 -
Cma14g01465 2102 TIGRFAM PPR: pentatricopeptide repeat domain 687 719 IPR002885 -
Cma14g01465 2102 TIGRFAM PPR: pentatricopeptide repeat domain 653 685 IPR002885 -
Cma14g01465 2102 TIGRFAM PPR: pentatricopeptide repeat domain 618 649 IPR002885 -
Cma14g01465 2102 PRINTS Isoleucyl-tRNA synthetase signature 897 908 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Cma14g01465 2102 PRINTS Isoleucyl-tRNA synthetase signature 1381 1394 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Cma14g01465 2102 PRINTS Isoleucyl-tRNA synthetase signature 1108 1131 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Cma14g01465 2102 PRINTS Isoleucyl-tRNA synthetase signature 1421 1430 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Cma14g01465 2102 PANTHER BNAUNNG00270D PROTEIN 1062 1303 - -
Cma14g01465 2102 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 904 915 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Cma14g01465 2102 Pfam PPR repeat 618 644 IPR002885 -
Cma14g01465 2102 Pfam PPR repeat 412 437 IPR002885 -
Cma14g01465 2102 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 1086 1310 IPR009008 GO:0002161|GO:0006418
Cma14g01465 2102 MobiDBLite consensus disorder prediction 1161 1189 - -
Cma14g01465 2102 Pfam Anticodon-binding domain of tRNA ligase 1638 1788 IPR013155 GO:0004812|GO:0006418
Cma14g01465 2102 SUPERFAMILY Nucleotidylyl transferase 865 1432 - -
Cma14g01465 2102 Gene3D - 1586 1778 - -
Cma14g01465 2102 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 1599 1848 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Cma14g01465 2102 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 615 649 IPR002885 -
Cma14g01465 2102 Pfam tRNA synthetases class I (I, L, M and V) 1062 1155 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Cma14g01465 2102 Pfam tRNA synthetases class I (I, L, M and V) 1301 1433 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Cma14g01465 2102 Pfam tRNA synthetases class I (I, L, M and V) 874 1034 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Cma14g01465 2102 Pfam tRNA synthetases class I (I, L, M and V) 1508 1582 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Cma14g01465 2102 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 480 514 IPR002885 -
Cma14g01465 2102 Pfam Protein of unknown function (DUF1685) 77 132 IPR012881 -
Cma14g01465 2102 Gene3D Tetratricopeptide repeat domain 557 796 IPR011990 GO:0005515
Cma14g01465 2102 Gene3D - 1087 1311 IPR009008 GO:0002161|GO:0006418
Cma14g01465 2102 CDD Anticodon_Ia_Ile_ABEc 1584 1771 IPR033709 GO:0000049
Cma14g01465 2102 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 650 684 IPR002885 -
Cma14g01465 2102 MobiDBLite consensus disorder prediction 1 25 - -
Cma14g01465 2102 PANTHER SOLEUCYL-TRNA SYNTHETASE 1062 1303 IPR023586 GO:0004822
Cma14g01465 2102 CDD IleRS_core 895 1584 - -
Cma14g01465 2102 SUPERFAMILY Nucleotidylyl transferase 1510 1594 - -
Cma14g01465 2102 MobiDBLite consensus disorder prediction 1 16 - -
Cma14g01465 2102 Gene3D Tetratricopeptide repeat domain 305 463 IPR011990 GO:0005515
Cma14g01465 2102 Gene3D Tetratricopeptide repeat domain 464 541 IPR011990 GO:0005515
Cma14g01465 2102 PANTHER BNAUNNG00270D PROTEIN 856 1035 - -
Cma14g01465 2102 PANTHER BNAUNNG00270D PROTEIN 1511 2032 - -
Cma14g01465 2102 PANTHER BNAUNNG00270D PROTEIN 1300 1431 - -
Cma14g01465 2102 PANTHER SOLEUCYL-TRNA SYNTHETASE 1300 1431 IPR023586 GO:0004822
Cma14g01465 2102 PANTHER SOLEUCYL-TRNA SYNTHETASE 1511 2032 IPR023586 GO:0004822
Cma14g01465 2102 PANTHER SOLEUCYL-TRNA SYNTHETASE 856 1035 IPR023586 GO:0004822
Cma14g01465 2102 Gene3D HUPs 859 1086 IPR014729 -
Cma14g01465 2102 Gene3D HUPs 1498 1582 IPR014729 -
Cma14g01465 2102 Pfam Domain of unknown function (DUF5915) 1807 1874 - -
Cma14g01465 2102 Pfam Domain of unknown function (DUF5915) 1921 1991 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01465 K01870 IARS, ileS; isoleucyl-tRNA synthetase [EC:6.1.1.5] - csv:101212830 984.941
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cma08g00076 Cma-Chr8:402640 Cma14g01465 Cma-Chr14:11151801 5.54E-62 dispersed
Cma10g01014 Cma-Chr10:5327300 Cma14g01465 Cma-Chr14:11151801 1.40E-20 dispersed
Cma14g01465 Cma-Chr14:11151801 Cma17g00595 Cma-Chr17:4937841 1.84E-54 dispersed
Cma12g00552 Cma-Chr12:2860526 Cma14g01465 Cma-Chr14:11151801 0 transposed
Cma14g01619 Cma-Chr14:12143025 Cma14g01465 Cma-Chr14:11151801 2.53E-09 transposed
Cma14g01465 Cma-Chr14:11151801 Cma06g01664 Cma-Chr6:10283073 4.98E-81 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1190 . . . . . . . . . . . Cma14g01465 . Car14g01301 . . Cpe03g01233 . . . . . . . . . . . . . . . . . . . . . Cme07g01901 . Blo07g00070 Bda11g00442 . . Bpe13g00734 . Bma06g01423 Sed09g0135 . Cmo14g01504 . . . . . . Bhi12g02569 Tan06g2212 Cmetu10g0535 Lac12g1942 Hepe03g0423 . Lcy13g0545 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007512 1 3 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 2 1 1 0 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cma14g01465 Cma_Chr14 FPKM 14.71055 15.896715 19.380238 19.747087 13.03895 12.925816 13.31451 15.760991 14.115674 14.994985