Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cma14g01473 ATGTCTTCGCAAGATCCACTCCCGAAATGGGCATCGAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCACTCGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCTGACTCAAAAACATTGAAGGAAGAGAAGAGGGAGGAATTGTTTGAAGGTTTGAAGGCTAATGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGGGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTGGTTACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAGAAGTACAGAATCAAGTTATCTGAAAAATTTCCCAATGTAAAATTTGTAGTTTCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTGACAAGAGATCGTGTGTTGCGGGATTGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCTCATTGGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACATTGTTGAAGTATCATGGGAGTCGGACAAAGTGGATGAAGATGGGGCAACGGGTGGGAGTGGTAAGAAACAATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCGAAAGGACGGTGCAAATTTTTCCAGGCTAGAAAACTTGAACAACTCACTCACTTCTGA 894 41.95 MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEEKREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDPEKYRIKLSEKFPNVKFVVSKKADSLYPVVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPSLVRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 11210905 11214878 + CmaCh14G014730.1 Cma14g01473 308456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cma14g01473 297 CDD RNase_HII_eukaryota_like 17 233 - -
Cma14g01473 297 Gene3D Ribonuclease hii. Domain 2 187 235 IPR023160 GO:0004523
Cma14g01473 297 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Cma14g01473 297 Gene3D - 2 186 IPR036397 GO:0003676
Cma14g01473 297 TIGRFAM TIGR00729: ribonuclease HII 16 228 IPR004649 GO:0004523|GO:0016070
Cma14g01473 297 PANTHER RIBONUCLEASE 7 296 - -
Cma14g01473 297 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 296 IPR001352 GO:0003723|GO:0004523
Cma14g01473 297 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Cma14g01473 297 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cma14g01473 K10743 - csv:101210143 575.089